Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g5184.t1
Gene name
Location	scaffold_12:122373..123268
Strand	+
Gene length (bp)	895
Transcript length (bp)	573
Coding sequence length (bp)	573
Protein length (aa)	191

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00036	EF-hand_1	EF hand	2.3E-06	67	90
PF00036	EF-hand_1	EF hand	3.0E-08	101	126
PF00036	EF-hand_1	EF hand	2.3E-06	149	172
PF13499	EF-hand_7	EF-hand domain pair	2.2E-15	99	171
PF13405	EF-hand_6	EF-hand domain	4.3E-06	66	90
PF13405	EF-hand_6	EF-hand domain	4.8E-05	149	171
PF13202	EF-hand_5	EF hand	1.4E-03	68	85
PF13202	EF-hand_5	EF hand	6.2E-05	104	123
PF13202	EF-hand_5	EF hand	4.2E-04	150	171
PF13833	EF-hand_8	EF-hand domain pair	8.0E-06	39	86
PF13833	EF-hand_8	EF-hand domain pair	4.2E-03	98	123
PF13833	EF-hand_8	EF-hand domain pair	1.6E-02	130	173

GO

GO Term	Description	Terminal node
GO:0005509	calcium ion binding	Yes
GO:0005488	binding	No
GO:0043167	ion binding	No
GO:0046872	metal ion binding	No
GO:0043169	cation binding	No
GO:0003674	molecular_function	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	5363
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g5955.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g3689.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g3875.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g7814.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g2800.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g6207.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g6232.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g7490.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g7168.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g6917.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g6804.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g6220.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g2478.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g292.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g8565.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g6223.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g8216.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g3910.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g6287.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g6779.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g4074.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g8765.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g6264.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g6515.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g1959.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g3736.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g8185.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g5973.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g6408.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g6585.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g7128.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g7206.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g6619.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g5184.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g5184.t1 MGKSQSKLSPTQLDELQRATHFDKKELQQWYKGFLKDCPSGTLTKEEFQKIYRQFFPFGDPSSFANYVFRVFDSD NSGMIDFKEFICALSVTSRGKMEDKLDWAFQLYDIDGDGKITYEEMLAIVEAIYKMVGSMVKLPEDEDTPEKRVR KIFRMMDKDENGSLDIDEFKEGSKRDETIVSALSLYDGLV*
Coding	>Pro_DTO377G3_2|g5184.t1 ATGGGAAAGTCTCAATCTAAGCTTTCACCGACGCAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAG GAGCTACAACAATGGTATAAAGGATTTCTCAAGGACTGCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAA ATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCATCCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGAC AACAGTGGTATGATCGATTTCAAAGAATTTATCTGCGCCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAA CTGGATTGGGCATTCCAATTGTACGATATTGACGGCGATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTC GAGGCGATCTATAAGATGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGATACCCCAGAGAAACGCGTACGA AAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGAGTTCAAAGAAGGCAGCAAACGG GATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG
Transcript	>Pro_DTO377G3_2|g5184.t1 ATGGGAAAGTCTCAATCTAAGCTTTCACCGACGCAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAG GAGCTACAACAATGGTATAAAGGATTTCTCAAGGACTGCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAA ATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCATCCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGAC AACAGTGGTATGATCGATTTCAAAGAATTTATCTGCGCCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAA CTGGATTGGGCATTCCAATTGTACGATATTGACGGCGATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTC GAGGCGATCTATAAGATGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGATACCCCAGAGAAACGCGTACGA AAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGAGTTCAAAGAAGGCAGCAAACGG GATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG
Gene	>Pro_DTO377G3_2|g5184.t1 ATGGGAAAGTCGTAAGTTCTAACCATCCTCTCACCCTGTTTGAAATGGCGGTGGAACGGACTCCGCGGATCTCAG GATGCGCGTCATCTCGGGAGCAAGCCAGTACCAAAGGCCCCGTACTTTTGGTCTGAGAATCACGCTGAATACCCT GCCTACATTCAAAGGAGAACCCTGCGCTGACCCTCGTGTTTCACATTCTACAGTCAATCTAAGCTTTCACCGACG CAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAGGAGCTACAACAATGGTATAAAGGTATGCGGATA TATGGGAAACATACGAAACATCAAGTCTCAAGAGCGATCGCTGATTATGGGCATGTCTAGGATTTCTCAAGGACT GCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAAATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCAT CCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGACAACAGTGGTATGATCGATTTCAAAGAATTTATCTGCG CCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAACTGGATTGGGCATTCCAATTGTACGATATTGACGGCG ATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTCGAGGCGATCTATAAGATGGTATGCACAATGCAGTTCG TGAAATCACGATACCCTTAAAAGAACTAATGAGTATACAGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGA TACCCCAGAGAAACGCGTACGAAAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGA GTTCAAAGAAGGCAGCAAACGGGATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG