Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5184.t1
Gene name
Locationscaffold_12:122373..123268
Strand+
Gene length (bp)895
Transcript length (bp)573
Coding sequence length (bp)573
Protein length (aa) 191

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00036 EF-hand_1 EF hand 2.3E-06 67 90
PF00036 EF-hand_1 EF hand 3.0E-08 101 126
PF00036 EF-hand_1 EF hand 2.3E-06 149 172
PF13499 EF-hand_7 EF-hand domain pair 2.2E-15 99 171
PF13405 EF-hand_6 EF-hand domain 4.3E-06 66 90
PF13405 EF-hand_6 EF-hand domain 4.8E-05 149 171
PF13202 EF-hand_5 EF hand 1.4E-03 68 85
PF13202 EF-hand_5 EF hand 6.2E-05 104 123
PF13202 EF-hand_5 EF hand 4.2E-04 150 171
PF13833 EF-hand_8 EF-hand domain pair 8.0E-06 39 86
PF13833 EF-hand_8 EF-hand domain pair 4.2E-03 98 123
PF13833 EF-hand_8 EF-hand domain pair 1.6E-02 130 173

GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0005488 binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup5363
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g5955.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g3689.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g3875.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g7814.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g2800.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g6207.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g6232.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g7490.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g7168.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g6917.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g6804.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g6220.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g2478.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g292.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g8565.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g6223.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g8216.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g3910.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g6287.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g6779.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g4074.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g8765.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g6264.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g6515.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g1959.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g3736.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g8185.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g5973.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g6408.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g6585.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7128.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g7206.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g6619.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5184.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5184.t1
MGKSQSKLSPTQLDELQRATHFDKKELQQWYKGFLKDCPSGTLTKEEFQKIYRQFFPFGDPSSFANYVFRVFDSD
NSGMIDFKEFICALSVTSRGKMEDKLDWAFQLYDIDGDGKITYEEMLAIVEAIYKMVGSMVKLPEDEDTPEKRVR
KIFRMMDKDENGSLDIDEFKEGSKRDETIVSALSLYDGLV*
Coding >Pro_DTO377G3_2|g5184.t1
ATGGGAAAGTCTCAATCTAAGCTTTCACCGACGCAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAG
GAGCTACAACAATGGTATAAAGGATTTCTCAAGGACTGCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAA
ATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCATCCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGAC
AACAGTGGTATGATCGATTTCAAAGAATTTATCTGCGCCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAA
CTGGATTGGGCATTCCAATTGTACGATATTGACGGCGATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTC
GAGGCGATCTATAAGATGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGATACCCCAGAGAAACGCGTACGA
AAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGAGTTCAAAGAAGGCAGCAAACGG
GATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG
Transcript >Pro_DTO377G3_2|g5184.t1
ATGGGAAAGTCTCAATCTAAGCTTTCACCGACGCAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAG
GAGCTACAACAATGGTATAAAGGATTTCTCAAGGACTGCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAA
ATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCATCCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGAC
AACAGTGGTATGATCGATTTCAAAGAATTTATCTGCGCCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAA
CTGGATTGGGCATTCCAATTGTACGATATTGACGGCGATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTC
GAGGCGATCTATAAGATGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGATACCCCAGAGAAACGCGTACGA
AAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGAGTTCAAAGAAGGCAGCAAACGG
GATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG
Gene >Pro_DTO377G3_2|g5184.t1
ATGGGAAAGTCGTAAGTTCTAACCATCCTCTCACCCTGTTTGAAATGGCGGTGGAACGGACTCCGCGGATCTCAG
GATGCGCGTCATCTCGGGAGCAAGCCAGTACCAAAGGCCCCGTACTTTTGGTCTGAGAATCACGCTGAATACCCT
GCCTACATTCAAAGGAGAACCCTGCGCTGACCCTCGTGTTTCACATTCTACAGTCAATCTAAGCTTTCACCGACG
CAGCTCGATGAGCTGCAAAGGGCAACACATTTCGATAAGAAGGAGCTACAACAATGGTATAAAGGTATGCGGATA
TATGGGAAACATACGAAACATCAAGTCTCAAGAGCGATCGCTGATTATGGGCATGTCTAGGATTTCTCAAGGACT
GCCCGTCTGGTACTCTGACCAAGGAGGAGTTTCAGAAAATATACCGGCAGTTCTTTCCCTTCGGCGACCCGTCAT
CCTTTGCCAATTATGTTTTTCGCGTTTTCGACTCGGACAACAGTGGTATGATCGATTTCAAAGAATTTATCTGCG
CCCTTTCCGTGACTTCGCGAGGCAAGATGGAGGATAAACTGGATTGGGCATTCCAATTGTACGATATTGACGGCG
ATGGGAAAATCACCTATGAAGAAATGCTGGCCATTGTCGAGGCGATCTATAAGATGGTATGCACAATGCAGTTCG
TGAAATCACGATACCCTTAAAAGAACTAATGAGTATACAGGTTGGATCCATGGTGAAACTCCCCGAGGATGAAGA
TACCCCAGAGAAACGCGTACGAAAGATCTTCCGCATGATGGACAAGGATGAAAATGGCAGTCTTGACATCGACGA
GTTCAAAGAAGGCAGCAAACGGGATGAAACCATCGTCAGTGCTTTGTCGCTTTACGACGGATTAGTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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