© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g5175.t1 |
| Gene name | |
| Location | scaffold_12:103372..104999 |
| Strand | - |
| Gene length (bp) | 1627 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.5E-41 | 59 | 460 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 54 | 76 | 22 |
| 2 | 91 | 113 | 22 |
| 3 | 120 | 142 | 22 |
| 4 | 152 | 169 | 17 |
| 5 | 182 | 204 | 22 |
| 6 | 208 | 230 | 22 |
| 7 | 250 | 272 | 22 |
| 8 | 282 | 304 | 22 |
| 9 | 317 | 339 | 22 |
| 10 | 354 | 376 | 22 |
| 11 | 381 | 403 | 22 |
| 12 | 413 | 435 | 22 |
| 13 | 444 | 466 | 22 |
| 14 | 486 | 508 | 22 |
| Orthofinder run ID | 2 |
| Orthogroup | 5354 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5175.t1 MELNHRTRSMSDSENDINLNKVPTQNDVDETLTRLETSQSQMEPPKSVFQETIFVSVVCMAQFMTQAGLSISIAP VHIIGDSFGTTNPADLSWFAAAYSLTVGTFILVAGRLGDVFGHRNMFVIGFCWFSIWSLLAGFSVWSNQIFFDCC RALQGIGPAMLLPNAIAILGRTYRPGLRKEMIFSAFGATAPGGFIVGGVFSSIFAQLVWWPWGYWVMGIACAMMA LIGWLVIPHTPQPKFDDNLRLWQRLDLPGATAGISGLVLINFAWNQAPLVGWKNPYTYVLLIVGFICLGAFTLIE RKALCPLLPRSVFTTELAWVLGCIAAGWSSFGIIIYYFYQFMEVIKGDSPLLATAKWSAAAISGAVAALITGFLL GRLPPSVIMFCAMAFFTAGLSIFATVPVDQIYWAQAFVVSLITSWGMDMSFPSGTLILSNAMPRHHQGLAASLVA TTVNYSISLGLGFAGTVETHVNDGGRNVLRGYRGALYMGIGLASLGLVLSICFMFTSWRHYRKNLKSQG* |
| Coding | >Pro_DTO377G3_2|g5175.t1 ATGGAGCTTAATCATCGCACTCGGTCAATGTCGGACTCGGAGAACGATATCAATCTAAACAAGGTGCCCACGCAA AATGATGTTGACGAAACTTTGACCCGACTGGAAACGTCTCAGTCTCAAATGGAACCGCCTAAATCGGTTTTTCAA GAGACCATCTTCGTCAGTGTGGTGTGTATGGCACAATTCATGACTCAAGCTGGTCTTAGTATCTCCATTGCTCCA GTCCATATCATCGGCGATAGCTTCGGCACCACAAATCCTGCCGATTTAAGCTGGTTCGCAGCCGCCTACAGCTTA ACGGTTGGCACTTTCATTCTTGTTGCTGGTAGACTAGGCGATGTCTTTGGTCACCGAAACATGTTTGTGATCGGT TTCTGTTGGTTCAGTATCTGGTCACTGTTGGCTGGGTTCAGTGTCTGGTCGAATCAGATATTCTTCGATTGCTGC CGTGCCCTTCAGGGGATTGGTCCCGCTATGTTACTTCCTAATGCAATTGCAATTCTTGGAAGAACATATCGGCCG GGCCTACGCAAGGAAATGATATTCAGTGCGTTTGGGGCTACAGCGCCTGGAGGGTTTATCGTGGGAGGTGTTTTC TCTTCTATCTTTGCTCAGCTTGTTTGGTGGCCCTGGGGATACTGGGTGATGGGAATCGCGTGTGCAATGATGGCC TTGATAGGATGGCTTGTCATCCCCCACACCCCCCAACCCAAATTCGACGACAACCTTCGTTTGTGGCAACGTCTT GATCTACCTGGTGCCACTGCAGGGATTTCAGGCCTGGTGCTGATCAACTTTGCTTGGAATCAAGCCCCGCTCGTG GGCTGGAAGAACCCTTACACCTATGTTCTCCTCATAGTTGGTTTTATTTGCCTCGGCGCCTTTACATTAATCGAA CGCAAGGCACTATGTCCATTGCTCCCGCGGTCAGTCTTTACTACTGAGCTGGCGTGGGTACTTGGGTGTATCGCA GCCGGCTGGTCGAGTTTTGGAATTATCATCTACTACTTCTATCAATTCATGGAAGTCATCAAAGGTGATTCTCCA CTGTTGGCCACGGCCAAATGGTCAGCGGCCGCTATTTCTGGTGCCGTGGCAGCTTTGATCACTGGTTTCCTACTT GGTCGCCTGCCACCCAGCGTCATCATGTTTTGCGCAATGGCATTTTTCACCGCAGGCCTCTCTATCTTCGCCACT GTACCTGTCGATCAAATTTACTGGGCGCAGGCATTTGTGGTGAGCTTGATAACCTCCTGGGGAATGGACATGTCT TTTCCCTCTGGAACCCTGATATTGAGCAACGCCATGCCTCGGCACCACCAAGGACTGGCCGCTTCCCTCGTTGCT ACAACGGTCAACTATTCTATCTCCCTTGGCCTAGGATTTGCAGGCACGGTAGAAACGCATGTCAATGATGGAGGG CGCAATGTACTACGGGGTTACCGCGGTGCGCTGTACATGGGAATTGGACTGGCGTCATTGGGTCTCGTGCTGTCG ATTTGTTTTATGTTTACGAGCTGGAGACATTATCGCAAAAATCTGAAAAGCCAGGGATAG |
| Transcript | >Pro_DTO377G3_2|g5175.t1 ATGGAGCTTAATCATCGCACTCGGTCAATGTCGGACTCGGAGAACGATATCAATCTAAACAAGGTGCCCACGCAA AATGATGTTGACGAAACTTTGACCCGACTGGAAACGTCTCAGTCTCAAATGGAACCGCCTAAATCGGTTTTTCAA GAGACCATCTTCGTCAGTGTGGTGTGTATGGCACAATTCATGACTCAAGCTGGTCTTAGTATCTCCATTGCTCCA GTCCATATCATCGGCGATAGCTTCGGCACCACAAATCCTGCCGATTTAAGCTGGTTCGCAGCCGCCTACAGCTTA ACGGTTGGCACTTTCATTCTTGTTGCTGGTAGACTAGGCGATGTCTTTGGTCACCGAAACATGTTTGTGATCGGT TTCTGTTGGTTCAGTATCTGGTCACTGTTGGCTGGGTTCAGTGTCTGGTCGAATCAGATATTCTTCGATTGCTGC CGTGCCCTTCAGGGGATTGGTCCCGCTATGTTACTTCCTAATGCAATTGCAATTCTTGGAAGAACATATCGGCCG GGCCTACGCAAGGAAATGATATTCAGTGCGTTTGGGGCTACAGCGCCTGGAGGGTTTATCGTGGGAGGTGTTTTC TCTTCTATCTTTGCTCAGCTTGTTTGGTGGCCCTGGGGATACTGGGTGATGGGAATCGCGTGTGCAATGATGGCC TTGATAGGATGGCTTGTCATCCCCCACACCCCCCAACCCAAATTCGACGACAACCTTCGTTTGTGGCAACGTCTT GATCTACCTGGTGCCACTGCAGGGATTTCAGGCCTGGTGCTGATCAACTTTGCTTGGAATCAAGCCCCGCTCGTG GGCTGGAAGAACCCTTACACCTATGTTCTCCTCATAGTTGGTTTTATTTGCCTCGGCGCCTTTACATTAATCGAA CGCAAGGCACTATGTCCATTGCTCCCGCGGTCAGTCTTTACTACTGAGCTGGCGTGGGTACTTGGGTGTATCGCA GCCGGCTGGTCGAGTTTTGGAATTATCATCTACTACTTCTATCAATTCATGGAAGTCATCAAAGGTGATTCTCCA CTGTTGGCCACGGCCAAATGGTCAGCGGCCGCTATTTCTGGTGCCGTGGCAGCTTTGATCACTGGTTTCCTACTT GGTCGCCTGCCACCCAGCGTCATCATGTTTTGCGCAATGGCATTTTTCACCGCAGGCCTCTCTATCTTCGCCACT GTACCTGTCGATCAAATTTACTGGGCGCAGGCATTTGTGGTGAGCTTGATAACCTCCTGGGGAATGGACATGTCT TTTCCCTCTGGAACCCTGATATTGAGCAACGCCATGCCTCGGCACCACCAAGGACTGGCCGCTTCCCTCGTTGCT ACAACGGTCAACTATTCTATCTCCCTTGGCCTAGGATTTGCAGGCACGGTAGAAACGCATGTCAATGATGGAGGG CGCAATGTACTACGGGGTTACCGCGGTGCGCTGTACATGGGAATTGGACTGGCGTCATTGGGTCTCGTGCTGTCG ATTTGTTTTATGTTTACGAGCTGGAGACATTATCGCAAAAATCTGAAAAGCCAGGGATAG |
| Gene | >Pro_DTO377G3_2|g5175.t1 ATGGAGCTTAATCATCGCACTCGGTCAATGTCGGACTCGGAGAACGATATCAATCTAAACAAGGTGCCCACGCAA AATGATGTTGACGAAACTTTGACCCGACTGGAAACGTCTCAGTCTCAAATGGAACCGCCTAAATCGGTTTTTCAA GAGACCATCTTCGTCAGTGTGGTGTGTATGGCACAATTCATGACTCAAGCTGGTCTTAGTATCTCCATTGCTCCA GTCCATATCATCGGCGATAGCTTCGGCACCACAAATCCTGCCGATTTAAGCTGGTTCGCAGCCGCCTACAGCTTA ACGGTTGGCACTTTCATTCTTGTTGCTGGTAGACTAGGCGATGTCTTTGGTCACCGAAACATGTTTGTGATCGGT TTCTGTTGGTTCAGTATCTGGTCACTGTTGGCTGGGTTCAGTGTCTGGTCGAATCAGATATTCTTCGATTGCTGC CGTGCCCTTCAGGGGATTGGTCCCGCTATGTTACTTCCTAATGCAATTGCAATTCTTGGAAGAACATATCGGCCG GGCCTACGCAAGGAAATGATATTCAGTGCGTTTGGGGCTACAGCGCCTGGAGGGTTTATCGTGGGAGGTGTTTTC TCTTCTATCTTTGCTCAGCTTGTTTGGTGGCCCTGGGGATACTGGGTGATGGGAATCGCGTGTGCAATGATGGCC TTGATAGGATGGCTTGTCATCCCCCACACCCCCCAACCCAAATTCGACGACAACCTTCGTTTGTGGCAACGTCTT GATCTACCTGGTGCCACTGCAGGGATTTCAGGCCTGGTGCTGATCAACTTTGCTTGGAATCAAGCCCCGCTCGTG GGCTGGAAGAACCCTTACACCTATGTTCTCCTCATAGTTGGTTTTATTTGCCTCGGCGCCTTTACATTAATCGAA CGCAAGGCACTATGTCCATTGCTCCCGCGGTCAGTCTTTACTACTGAGCTGGCGTGGGTACTTGGGTGTATCGCA GCCGGCTGGTCGAGTTTTGGAATTATCATCTACTACTTCTATCAATTCATGGAAGTCATCAAAGGTGATTCTCCA CTGTTGGCCACGGCCAAATGGTCAGCGGCCGCTATTTCTGGTGCCGTGGCAGCTTTGATCACTGGTTTCCTACTT GGTCGCCTGCCACCCAGCGTCATCATGTTTTGCGCAATGGCATTTTTCACCGCAGGCCTCTCTATCTTCGCCACT GTACCTGTCGATCAAATTTACTGGGCGCAGGCATTTGTGGTGAGCTTGATAACCTCCTGGGGAATGTAAGTCTTC TTATTCTTGCGTCATTAGATTTGGTCCTATTCAGCGTCATTAATCATTCGCCTTTAGGGACATGTCTTTTCCCTC TGGAACCCTGATATTGAGCAACGCCATGCCTCGGCACCACCAAGGACTGGCCGCTTCCCTCGTTGCTACAACGGT CAACTATTCTATCTCCCTTGGCCTAGGATTTGCAGGCACGGTAGAAACGCATGTCAATGATGGAGGGCGCAATGT ACTACGGGGTTACCGCGGTGCGCTGTACATGGGAATTGGACTGGCGTCATTGGGTCTCGTGCTGTCGATTTGTTT TATGTTTACGAGCTGGAGACATTATCGCAAAAATCTGAAAAGCCAGGGATAG |