Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5174.t1
Gene name
Locationscaffold_12:101605..102842
Strand-
Gene length (bp)1237
Transcript length (bp)1188
Coding sequence length (bp)1188
Protein length (aa) 396

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01070 FMN_dh FMN-dependent dehydrogenase 8.0E-111 22 377
PF01645 Glu_synthase Conserved region in glutamate synthase 4.2E-05 300 348

GO

GO Term Description Terminal node
GO:0015930 glutamate synthase activity Yes
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors Yes
GO:0016491 oxidoreductase activity Yes
GO:0006537 glutamate biosynthetic process Yes
GO:0009058 biosynthetic process No
GO:0043650 dicarboxylic acid biosynthetic process No
GO:0046394 carboxylic acid biosynthetic process No
GO:0006520 cellular amino acid metabolic process No
GO:0008152 metabolic process No
GO:0006082 organic acid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:1901605 alpha-amino acid metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0019752 carboxylic acid metabolic process No
GO:1901607 alpha-amino acid biosynthetic process No
GO:0043648 dicarboxylic acid metabolic process No
GO:0009084 glutamine family amino acid biosynthetic process No
GO:0003824 catalytic activity No
GO:0009064 glutamine family amino acid metabolic process No
GO:0044238 primary metabolic process No
GO:0008652 cellular amino acid biosynthetic process No
GO:0003674 molecular_function No
GO:0044281 small molecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0016053 organic acid biosynthetic process No
GO:0044283 small molecule biosynthetic process No
GO:0043436 oxoacid metabolic process No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:1901576 organic substance biosynthetic process No
GO:0006536 glutamate metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5174.t1
MAINKIPDSSLCVTTTDFEKVAKNVLSEKSWVYASSSANTGLSMRTNLDDWSLINFRPRILRSVDSMDTRRNILG
HTSQFPFFVSAMGTLGSSHPGAEPLLVRGATRKGLHTMISTASTKPLEEIMDAHLDEQRLLGNQSPSNLSFQLYV
PVDRTKAKSLIQRVKAAGYQSLWVTVDTSTLGKRTADRYLQAQENIDAGLTENARDTHGENEFAPAFGGRQVPGS
VDGGLTWEDLDWISSEWGGPLVLKGVQSVEDVKLAVQYGVQGILLSNHGGRQIHSAPSSLMTLLEIRTYYPEAFD
KLQVFVDGGLRDGADVLKALCLGATAVGVGRPYYYALAAYGAEGVERCTDIIAEELEITMKMLGVSSLDQLRPDM
VNTSRLMNEMWRPVFGKSKL*
Coding >Pro_DTO377G3_2|g5174.t1
ATGGCAATCAACAAAATTCCCGATTCTTCTCTATGTGTCACCACGACAGACTTTGAGAAGGTCGCAAAGAATGTC
CTGTCGGAGAAGTCATGGGTTTACGCATCAAGCTCAGCTAATACGGGCCTGTCAATGAGAACCAATCTGGATGAC
TGGTCTCTGATCAACTTTCGCCCTCGGATCTTGAGAAGTGTTGATTCAATGGACACCCGAAGGAACATCTTGGGA
CATACCTCCCAGTTTCCCTTCTTCGTATCAGCTATGGGTACACTGGGCAGCTCACACCCTGGCGCTGAACCCTTG
CTGGTGAGAGGAGCTACCCGCAAAGGACTGCACACCATGATCAGTACAGCATCTACGAAGCCGCTCGAGGAGATC
ATGGATGCTCATCTGGACGAGCAACGGCTACTTGGCAACCAAAGCCCTTCGAACTTGTCATTCCAGCTCTATGTG
CCTGTGGATCGGACAAAAGCCAAGTCACTCATTCAAAGAGTCAAGGCAGCCGGATACCAAAGCTTGTGGGTCACG
GTGGACACTTCAACCCTGGGAAAGCGTACTGCCGATCGCTACCTCCAAGCACAAGAAAATATCGACGCTGGTTTG
ACCGAAAATGCACGAGACACTCACGGTGAGAACGAATTTGCGCCAGCATTTGGGGGTCGCCAGGTTCCCGGCTCG
GTCGATGGTGGTCTTACTTGGGAAGATTTGGACTGGATTTCGTCAGAGTGGGGTGGGCCACTGGTTCTTAAGGGG
GTTCAAAGTGTAGAGGACGTGAAGCTGGCCGTCCAATATGGTGTGCAGGGAATTCTGTTGAGCAACCATGGAGGC
AGGCAGATTCATTCCGCCCCAAGCTCATTGATGACGCTCCTGGAGATTCGCACATACTACCCGGAGGCTTTCGAC
AAGCTCCAGGTGTTTGTTGATGGAGGTCTTCGCGACGGAGCAGATGTTCTCAAGGCGTTGTGTCTTGGAGCGACC
GCCGTTGGAGTGGGCCGGCCTTACTACTATGCCCTCGCGGCATACGGCGCCGAAGGAGTGGAAAGATGTACAGAT
ATCATCGCCGAAGAACTTGAAATCACCATGAAGATGCTTGGAGTCTCTTCCCTCGACCAATTGCGACCAGACATG
GTAAACACCAGCCGACTAATGAATGAAATGTGGCGACCAGTATTTGGAAAGTCTAAGTTGTGA
Transcript >Pro_DTO377G3_2|g5174.t1
ATGGCAATCAACAAAATTCCCGATTCTTCTCTATGTGTCACCACGACAGACTTTGAGAAGGTCGCAAAGAATGTC
CTGTCGGAGAAGTCATGGGTTTACGCATCAAGCTCAGCTAATACGGGCCTGTCAATGAGAACCAATCTGGATGAC
TGGTCTCTGATCAACTTTCGCCCTCGGATCTTGAGAAGTGTTGATTCAATGGACACCCGAAGGAACATCTTGGGA
CATACCTCCCAGTTTCCCTTCTTCGTATCAGCTATGGGTACACTGGGCAGCTCACACCCTGGCGCTGAACCCTTG
CTGGTGAGAGGAGCTACCCGCAAAGGACTGCACACCATGATCAGTACAGCATCTACGAAGCCGCTCGAGGAGATC
ATGGATGCTCATCTGGACGAGCAACGGCTACTTGGCAACCAAAGCCCTTCGAACTTGTCATTCCAGCTCTATGTG
CCTGTGGATCGGACAAAAGCCAAGTCACTCATTCAAAGAGTCAAGGCAGCCGGATACCAAAGCTTGTGGGTCACG
GTGGACACTTCAACCCTGGGAAAGCGTACTGCCGATCGCTACCTCCAAGCACAAGAAAATATCGACGCTGGTTTG
ACCGAAAATGCACGAGACACTCACGGTGAGAACGAATTTGCGCCAGCATTTGGGGGTCGCCAGGTTCCCGGCTCG
GTCGATGGTGGTCTTACTTGGGAAGATTTGGACTGGATTTCGTCAGAGTGGGGTGGGCCACTGGTTCTTAAGGGG
GTTCAAAGTGTAGAGGACGTGAAGCTGGCCGTCCAATATGGTGTGCAGGGAATTCTGTTGAGCAACCATGGAGGC
AGGCAGATTCATTCCGCCCCAAGCTCATTGATGACGCTCCTGGAGATTCGCACATACTACCCGGAGGCTTTCGAC
AAGCTCCAGGTGTTTGTTGATGGAGGTCTTCGCGACGGAGCAGATGTTCTCAAGGCGTTGTGTCTTGGAGCGACC
GCCGTTGGAGTGGGCCGGCCTTACTACTATGCCCTCGCGGCATACGGCGCCGAAGGAGTGGAAAGATGTACAGAT
ATCATCGCCGAAGAACTTGAAATCACCATGAAGATGCTTGGAGTCTCTTCCCTCGACCAATTGCGACCAGACATG
GTAAACACCAGCCGACTAATGAATGAAATGTGGCGACCAGTATTTGGAAAGTCTAAGTTGTGA
Gene >Pro_DTO377G3_2|g5174.t1
ATGGCAATCAACAAAATTCCCGATTCTTCTCTATGTGTCACCACGACAGACTTTGAGAAGGTCGCAAAGAATGTC
CTGTCGGAGAAGTCATGGGTTTACGCATCAAGCTCAGCTAATACGGGCCTGTCAATGAGAACCAATCTGGATGAC
TGGTCTCTGATCAACTTTCGCCCTCGGATCTTGAGAAGTGTTGATTCAATGGACACCCGAAGGAACATCTTGGGA
CATACCTCCCAGTTTCCCTTCTTCGTATCAGCTATGGGTACACTGGGCAGCTCACACCCTGGCGCTGAACCCTTG
CTGGTGAGAGGAGCTACCCGCAAAGGACTGCACACCATGATCAGTACAGCATCTACGAAGCCGCTCGAGGAGATC
ATGGATGCTCATCTGGACGAGCAACGGCTACTTGGCAACCAAAGCCCTTCGAACTTGTCATTCCAGCTCTATGTG
CCTGTGGATCGGACAAAAGCCAAGTCACTCATTCAAAGAGTCAAGGCAGCCGGATACCAAAGCTTGTGGGTCACG
GTGGACACTTCAACCCTGGGAAAGCGTACTGCCGATCGCTACCTCCAAGCACAAGAAAATATCGACGCTGGTTTG
ACCGAAAATGCACGAGACACTCACGGTGAGAACGAATTTGCGCCAGCATTTGGGGGTCGCCAGGTTCCCGGCTCG
GTCGATGGTGGTCTTACTTGGGAAGATTTGGACTGGATTTCGTCAGAGTGGGGTGGGCCACTGGTTCTTAAGGGG
GTTCAAAGTGTAGAGGACGTGAAGCTGGCCGTCCAATATGGTGTGCAGGGAATTCTGTTGAGCAACCATGGAGGC
AGGCAGATTCATTCCGCCCCAAGCTCATTGATGACGCTCCTGGAGATTCGCACATACTACCCGGAGGCTTTCGAC
AAGCTCCAGGTGTTTGTTGATGGAGGTCTTCGCGACGGAGCAGATGTTCTCAAGGCGTTGTGTCTTGGAGCGACC
GCCGTTGGAGTGGGCCGGCCTTACTACTATGCCCTCGCGGCATACGGCGCCGAAGGAGTGGAAAGATGTACAGAT
AGTAAGTTGGGACCGGTATTCAAATCAATTCCAAGCTAACACATTGGCAGTCATCGCCGAAGAACTTGAAATCAC
CATGAAGATGCTTGGAGTCTCTTCCCTCGACCAATTGCGACCAGACATGGTAAACACCAGCCGACTAATGAATGA
AATGTGGCGACCAGTATTTGGAAAGTCTAAGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail