© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g5170.t1 |
| Gene name | |
| Location | scaffold_12:88123..91226 |
| Strand | - |
| Gene length (bp) | 3103 |
| Transcript length (bp) | 2709 |
| Coding sequence length (bp) | 2709 |
| Protein length (aa) | 903 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01644 | Chitin_synth_1 | Chitin synthase | 2.5E-66 | 214 | 382 |
| PF08407 | Chitin_synth_1N | Chitin synthase N-terminal | 6.5E-27 | 134 | 213 |
| PF03142 | Chitin_synth_2 | Chitin synthase | 2.2E-19 | 359 | 537 |
| PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 1.9E-09 | 360 | 590 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006031 | chitin biosynthetic process | Yes |
| GO:0004100 | chitin synthase activity | Yes |
| GO:1901073 | glucosamine-containing compound biosynthetic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0046349 | amino sugar biosynthetic process | No |
| GO:0008194 | UDP-glycosyltransferase activity | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0008152 | metabolic process | No |
| GO:1901071 | glucosamine-containing compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006040 | amino sugar metabolic process | No |
| GO:0006030 | chitin metabolic process | No |
| GO:0008375 | acetylglucosaminyltransferase activity | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0006022 | aminoglycan metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006023 | aminoglycan biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 574 | 596 | 22 |
| 2 | 616 | 638 | 22 |
| 3 | 648 | 670 | 22 |
| 4 | 694 | 716 | 22 |
| 5 | 731 | 753 | 22 |
| 6 | 831 | 853 | 22 |
| 7 | 868 | 890 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5170.t1 MSFPQRSTSPHSPHSGDLSHSPQASETSVYGPREQAYGYEEKPENLDSQQSLLYRNQPSPFNASFDDPYASTDSL RRYTLQDPGVTIFPDGPYQESAGGLNSRRSGIQSPMSETPSEAWQNRQAPVSGLRRYATRKIKLVQGSVLSVDYP VPSAIQNAIQKEYRESEEGFPEEFTHLRYTAATCDPDEFTLRNGYNLRPAMYNRHTELLIAITYYNEDKVLTART LHGVMQNIRDIVNLKKSEFWNKGGPAWQKIVCSLVFDGIDPCDKNTLDLLATVGIYQDGIMKRSVDGRETVAHIF EYTTQLSVTPSQQLIRPQGNESSNLPPVQMIFCLKQKNSKKINSHRWLFNGFSRILNPEVVILIDAGTKPGKKSL LALWESFYNDKNLGGSCGEIHAMLGQGWKNLMNPLVAAQNFEYKISNILDKPLESAFGYVSVLPGAFSAYRYRAI MGRPLEQYFHGDHTLSKQLGKKGIEGMNIFKKNMFLAEDRILCFELVAKAGFKWHLTYVKASKGETDVPEGAAEF ISQRRRWLNGSFAASLYAMMHFGRIYKSGHNLLRLFFLHIQMTYNFMGLVMTWFSLASFWLTTTVIMDLVGTPSE SNKNRGWPFGNEATPIVNNFLKYGYIFFLMLQFILALGNRPKGSRLAYTLSFMYFSIVQTYIMVLSFYLVKNAFT GGTLDFSMDRGVSHFLKSFFGSSGAGIVLIALVSTYGIYFIASFLYMDPWHMFTSSWAYFAGMTCSINILMVYAF CNWHDVSWGTKGSDKGDSLPVAETKKDDAKSNFIEEVDKPQADIDSQFESTVKRALEPYVEPEDNDEPSMDDGYK AFRTNLVLIWIFSNLILALCITSEGITRLCLTNTSTLRTSKYFAAILWTTAGLSIFRFIGSLWFLGKSGILCCVS RR* |
| Coding | >Pro_DTO377G3_2|g5170.t1 ATGTCTTTTCCTCAGAGGAGCACATCGCCTCACTCGCCTCACTCAGGCGACCTATCTCATTCTCCCCAAGCCAGC GAGACTAGCGTGTATGGTCCACGAGAGCAAGCGTACGGTTACGAGGAGAAACCCGAGAACCTCGACAGCCAGCAG TCTTTGCTTTACCGAAACCAGCCTAGCCCTTTCAACGCTTCATTCGATGACCCATATGCCTCGACCGATTCCCTC CGTCGCTACACACTACAGGACCCCGGAGTCACCATCTTCCCCGATGGTCCATACCAGGAGTCCGCAGGAGGACTC AACAGCCGTCGTTCGGGTATTCAATCACCCATGTCTGAGACTCCGTCGGAAGCTTGGCAAAACCGACAGGCACCT GTGTCAGGGCTGCGGCGTTATGCTACGCGAAAGATCAAGTTGGTCCAGGGCTCTGTGCTCAGTGTCGACTATCCA GTTCCAAGCGCCATCCAGAATGCGATACAGAAGGAGTATCGGGAATCGGAGGAGGGCTTCCCGGAAGAATTCACG CATCTGCGTTATACCGCGGCCACCTGTGATCCTGACGAGTTCACCCTACGAAACGGATACAATCTGCGACCGGCT ATGTACAACCGACACACTGAGCTTTTGATCGCTATCACATATTACAACGAAGATAAAGTTCTGACCGCGCGGACG CTCCACGGTGTCATGCAGAACATTCGAGATATCGTCAATTTGAAGAAGTCGGAATTCTGGAATAAGGGTGGCCCG GCCTGGCAAAAGATTGTGTGCTCCTTGGTTTTTGATGGTATTGATCCTTGCGACAAAAATACACTCGACTTATTG GCCACTGTTGGTATCTACCAAGATGGCATCATGAAGCGCTCCGTCGATGGTCGGGAAACCGTCGCACACATCTTC GAATATACCACCCAACTCTCAGTTACACCAAGCCAACAGTTGATCCGGCCCCAGGGCAACGAGTCATCAAACCTT CCTCCCGTTCAAATGATTTTCTGTCTGAAGCAGAAGAACAGTAAAAAGATTAACTCCCACCGCTGGCTCTTTAAC GGTTTCAGCCGAATCCTTAACCCCGAAGTCGTGATTCTCATTGATGCCGGAACTAAACCGGGAAAGAAATCACTC CTTGCATTGTGGGAGTCTTTCTACAATGACAAGAACCTAGGTGGATCTTGCGGTGAGATTCACGCAATGTTAGGA CAAGGTTGGAAAAACTTGATGAACCCCCTCGTCGCCGCACAAAACTTCGAGTACAAGATCTCCAATATTCTTGAC AAACCGCTAGAGAGTGCCTTCGGGTACGTTAGTGTGTTACCGGGTGCCTTCTCCGCGTACCGCTATCGCGCTATT ATGGGTCGCCCGCTAGAGCAGTACTTCCACGGCGATCATACACTCTCAAAGCAGTTGGGTAAGAAGGGTATTGAG GGCATGAATATCTTTAAAAAGAATATGTTCCTCGCCGAGGACCGTATCTTATGTTTCGAGCTTGTGGCAAAGGCT GGATTTAAATGGCATCTAACCTACGTGAAGGCGTCAAAGGGCGAGACTGATGTGCCGGAGGGTGCAGCCGAGTTT ATCAGTCAGCGACGTCGTTGGTTGAACGGTTCGTTCGCCGCCAGTTTGTACGCAATGATGCATTTTGGAAGGATT TATAAGAGTGGCCACAACCTCCTACGGCTGTTCTTCCTACATATCCAAATGACATACAACTTCATGGGTCTTGTC ATGACCTGGTTCTCTCTCGCCTCGTTCTGGCTGACTACTACTGTCATCATGGATCTTGTCGGAACTCCTAGTGAG TCCAACAAGAATAGGGGATGGCCGTTCGGTAACGAAGCGACGCCAATCGTGAACAACTTCCTCAAGTACGGATAC ATCTTCTTCTTGATGCTCCAGTTCATCCTAGCGCTAGGAAATCGACCGAAAGGTTCACGTCTCGCATACACGCTT TCGTTCATGTATTTCAGTATCGTTCAAACTTACATCATGGTCCTATCATTCTACCTTGTCAAGAATGCTTTCACT GGAGGCACGCTTGATTTCTCTATGGACCGAGGTGTTTCCCACTTCCTAAAGTCTTTCTTCGGTTCGTCCGGGGCC GGTATCGTCCTGATCGCTTTGGTTTCGACTTATGGTATTTACTTCATCGCAAGTTTCTTGTACATGGATCCCTGG CATATGTTCACGTCCTCCTGGGCGTACTTTGCCGGTATGACATGTTCGATCAATATCCTGATGGTCTACGCTTTC TGCAACTGGCATGACGTTTCCTGGGGTACCAAGGGTTCTGACAAGGGCGATTCGCTCCCCGTCGCTGAGACGAAG AAAGACGACGCCAAGTCAAACTTCATTGAAGAAGTCGATAAGCCACAGGCCGATATCGACAGTCAGTTCGAATCG ACGGTCAAGAGAGCACTAGAGCCATATGTTGAGCCTGAAGATAATGACGAACCAAGCATGGATGATGGCTATAAG GCTTTCCGAACCAACCTGGTGTTGATTTGGATTTTCAGCAACCTGATCCTTGCACTGTGTATCACCAGTGAAGGC ATCACCCGTCTCTGTCTCACGAACACTTCTACCCTTCGTACCTCCAAGTATTTCGCCGCTATTCTGTGGACGACC GCCGGTCTGTCGATTTTCCGCTTTATTGGATCCCTCTGGTTCCTGGGCAAGTCTGGTATCTTGTGCTGTGTTTCT CGCCGTTAA |
| Transcript | >Pro_DTO377G3_2|g5170.t1 ATGTCTTTTCCTCAGAGGAGCACATCGCCTCACTCGCCTCACTCAGGCGACCTATCTCATTCTCCCCAAGCCAGC GAGACTAGCGTGTATGGTCCACGAGAGCAAGCGTACGGTTACGAGGAGAAACCCGAGAACCTCGACAGCCAGCAG TCTTTGCTTTACCGAAACCAGCCTAGCCCTTTCAACGCTTCATTCGATGACCCATATGCCTCGACCGATTCCCTC CGTCGCTACACACTACAGGACCCCGGAGTCACCATCTTCCCCGATGGTCCATACCAGGAGTCCGCAGGAGGACTC AACAGCCGTCGTTCGGGTATTCAATCACCCATGTCTGAGACTCCGTCGGAAGCTTGGCAAAACCGACAGGCACCT GTGTCAGGGCTGCGGCGTTATGCTACGCGAAAGATCAAGTTGGTCCAGGGCTCTGTGCTCAGTGTCGACTATCCA GTTCCAAGCGCCATCCAGAATGCGATACAGAAGGAGTATCGGGAATCGGAGGAGGGCTTCCCGGAAGAATTCACG CATCTGCGTTATACCGCGGCCACCTGTGATCCTGACGAGTTCACCCTACGAAACGGATACAATCTGCGACCGGCT ATGTACAACCGACACACTGAGCTTTTGATCGCTATCACATATTACAACGAAGATAAAGTTCTGACCGCGCGGACG CTCCACGGTGTCATGCAGAACATTCGAGATATCGTCAATTTGAAGAAGTCGGAATTCTGGAATAAGGGTGGCCCG GCCTGGCAAAAGATTGTGTGCTCCTTGGTTTTTGATGGTATTGATCCTTGCGACAAAAATACACTCGACTTATTG GCCACTGTTGGTATCTACCAAGATGGCATCATGAAGCGCTCCGTCGATGGTCGGGAAACCGTCGCACACATCTTC GAATATACCACCCAACTCTCAGTTACACCAAGCCAACAGTTGATCCGGCCCCAGGGCAACGAGTCATCAAACCTT CCTCCCGTTCAAATGATTTTCTGTCTGAAGCAGAAGAACAGTAAAAAGATTAACTCCCACCGCTGGCTCTTTAAC GGTTTCAGCCGAATCCTTAACCCCGAAGTCGTGATTCTCATTGATGCCGGAACTAAACCGGGAAAGAAATCACTC CTTGCATTGTGGGAGTCTTTCTACAATGACAAGAACCTAGGTGGATCTTGCGGTGAGATTCACGCAATGTTAGGA CAAGGTTGGAAAAACTTGATGAACCCCCTCGTCGCCGCACAAAACTTCGAGTACAAGATCTCCAATATTCTTGAC AAACCGCTAGAGAGTGCCTTCGGGTACGTTAGTGTGTTACCGGGTGCCTTCTCCGCGTACCGCTATCGCGCTATT ATGGGTCGCCCGCTAGAGCAGTACTTCCACGGCGATCATACACTCTCAAAGCAGTTGGGTAAGAAGGGTATTGAG GGCATGAATATCTTTAAAAAGAATATGTTCCTCGCCGAGGACCGTATCTTATGTTTCGAGCTTGTGGCAAAGGCT GGATTTAAATGGCATCTAACCTACGTGAAGGCGTCAAAGGGCGAGACTGATGTGCCGGAGGGTGCAGCCGAGTTT ATCAGTCAGCGACGTCGTTGGTTGAACGGTTCGTTCGCCGCCAGTTTGTACGCAATGATGCATTTTGGAAGGATT TATAAGAGTGGCCACAACCTCCTACGGCTGTTCTTCCTACATATCCAAATGACATACAACTTCATGGGTCTTGTC ATGACCTGGTTCTCTCTCGCCTCGTTCTGGCTGACTACTACTGTCATCATGGATCTTGTCGGAACTCCTAGTGAG TCCAACAAGAATAGGGGATGGCCGTTCGGTAACGAAGCGACGCCAATCGTGAACAACTTCCTCAAGTACGGATAC ATCTTCTTCTTGATGCTCCAGTTCATCCTAGCGCTAGGAAATCGACCGAAAGGTTCACGTCTCGCATACACGCTT TCGTTCATGTATTTCAGTATCGTTCAAACTTACATCATGGTCCTATCATTCTACCTTGTCAAGAATGCTTTCACT GGAGGCACGCTTGATTTCTCTATGGACCGAGGTGTTTCCCACTTCCTAAAGTCTTTCTTCGGTTCGTCCGGGGCC GGTATCGTCCTGATCGCTTTGGTTTCGACTTATGGTATTTACTTCATCGCAAGTTTCTTGTACATGGATCCCTGG CATATGTTCACGTCCTCCTGGGCGTACTTTGCCGGTATGACATGTTCGATCAATATCCTGATGGTCTACGCTTTC TGCAACTGGCATGACGTTTCCTGGGGTACCAAGGGTTCTGACAAGGGCGATTCGCTCCCCGTCGCTGAGACGAAG AAAGACGACGCCAAGTCAAACTTCATTGAAGAAGTCGATAAGCCACAGGCCGATATCGACAGTCAGTTCGAATCG ACGGTCAAGAGAGCACTAGAGCCATATGTTGAGCCTGAAGATAATGACGAACCAAGCATGGATGATGGCTATAAG GCTTTCCGAACCAACCTGGTGTTGATTTGGATTTTCAGCAACCTGATCCTTGCACTGTGTATCACCAGTGAAGGC ATCACCCGTCTCTGTCTCACGAACACTTCTACCCTTCGTACCTCCAAGTATTTCGCCGCTATTCTGTGGACGACC GCCGGTCTGTCGATTTTCCGCTTTATTGGATCCCTCTGGTTCCTGGGCAAGTCTGGTATCTTGTGCTGTGTTTCT CGCCGTTAA |
| Gene | >Pro_DTO377G3_2|g5170.t1 ATGTCTTTTCCTCAGAGGAGCACATCGCCTCACTCGCCTCACTCAGGCGACCTATCTCATTCTCCCCAAGCCAGC GAGACTAGCGTGTATGGTCCACGAGAGGTGAGTGACCAGCGACTCGGAACAAAAAAAAAAACAAACAAACAGAGG AGACCGACCAAGACAGCAGTGGATGCTAATTCAGTTTGTTCCACAGCAAGCGTACGGTTACGAGGAGAAACCCGA GAACCTCGACAGCCAGCAGTCTTTGCTTTACCGAAACCAGCCTAGCCCTTTCAACGCTTCATTCGATGACCCATA TGCCTCGACCGATTCCCTCCGTCGCTACACACTACAGGACCCCGGAGTCACCATCTTCCCCGATGGTCCATACCA GGAGTCCGCAGGAGGACTCAACAGCCGTCGTTCGGGTATTCAATCACCCATGTCTGAGACTCCGTCGGAAGCTTG GCAAAACCGACAGGCACCTGTGTCAGGGCTGCGGCGTTATGCTACGCGAAAGATCAAGTTGGTCCAGGGCTCTGT GCTCAGTGTCGACTATCCAGTTCCAAGCGCCATCCAGAATGCGATACAGAAGGAGTATCGGGAATCGGAGGAGGG CTTCCCGGAAGAATTCACGCATCTGCGTTGTAAGTCTTCGTGTCAAATATTGATCATGCGACTCGAGCTGATCGC ACACAGATACCGCGGCCACCTGTGATCCTGACGAGTTCACCCTACGAAACGGATACAATCTGCGACCGGCTATGT ACAACCGACACACTGAGCTTTTGATCGCTATCACATATTACAACGAAGATAAAGTTCTGACCGCGCGGACGCTCC ACGGTGTCATGCAGAACATTCGAGATATCGTCAATTTGAAGAAGTCGGAATTCTGGAATAAGGGTGGCCCGGCCT GGCAAAAGATTGTGTGCTCCTTGGTTTTTGATGGTATTGATCCTTGCGACAAAAATACACTCGACTTATTGGCCA CTGTTGGTATCTACCAAGATGGCATCATGAAGCGCTCCGTCGATGGTCGGGAAACCGTCGCACACATCGTGAGTT CTTATAGTCTTGATTCACCTTGGCAAAGTCTACCCTCTTTCCCGGTGTCTTTGTGGCCGACGAAAATCCACTAAC AAGATCAAGTTCGAATATACCACCCAACTCTCAGTTACACCAAGCCAACAGTTGATCCGGCCCCAGGGCAACGAG TCATCAAACCTTCCTCCCGTTCAAATGATTTTCTGTCTGAAGCAGAAGAACAGTAAAAAGATTAACTCCCACCGC TGGCTCTTTAACGGTTTCAGCCGAATCCTTAACCCCGAAGTCGTGATTCTCATTGATGCCGGAACTAAACCGGGA AAGAAATCACTCCTTGCATTGTGGGAGTCTTTCTACAATGACAAGAACCTAGGTGGATCTTGCGGTGAGATTCAC GCAATGTTAGGACAAGGTTGGAAAAACTTGATGAACCCCCTCGTCGCCGCACAAAACTTCGAGTACAAGATCTCC AATATTCTTGACAAACCGCTAGAGAGTGCCTTCGGGTACGTTAGTGTGTTACCGGGTGCCTTCTCCGCGTACCGC TATCGCGCTATTATGGGTCGCCCGCTAGAGCAGTACTTCCACGGCGATCATACACTCTCAAAGCAGTTGGGTAAG AAGGGTATTGAGGGCATGAATATCTTTAAAAAGAATATGTTCCTCGCCGAGGACCGTATCTTATGTTTCGAGCTT GTGGCAAAGGCTGGATTTAAATGGCATCTAACCTACGTGAAGGCGTCAAAGGGCGAGACTGATGTGCCGGAGGGT GCAGCCGAGTTTATCAGTCAGCGACGTCGTTGGTTGAACGGTTCGTTCGCCGCCAGTTTGTACGCAATGATGCAT TTTGGAAGGATTTATAAGAGTGGCCACAACCTCCTACGGCTGTTCTTCCTACATATCCAAATGACATACAACTTC ATGGGTCTTGTCATGACCTGGTTCTCTCTCGGTATGTCTCGGATCTCGTGTTCTTTGGTGAATCTCATACTAACT CGTACTAGCCTCGTTCTGGCTGACTACTACTGTCATCATGGATCTTGTCGGAACTCCTAGTGAGTCCAACAAGAA TAGGGGATGGCCGTTCGGTAACGAAGCGACGCCAATCGTGAACAACTTCCTCAAGTACGGATACATCTTCTTCTT GATGCTCCAGTTCATCCTAGCGCTAGGAAATCGACCGAAAGGGTAAGCTAAAATCTGAAAAAAATCACCCCATCA TGTCAAACTGACATTTGAAACAGTTCACGTCTCGCATACACGCTTTCGTTCATGTATTTCAGTATCGTTCAAACT TACATCATGGTCCTATCATTCTACCTTGTCAAGAATGCTTTCACTGGAGGCACGCTTGATTTCTCTATGGACCGA GGTGTTTCCCACTTCCTAAAGTCTTTCTTCGGTTCGTCCGGGGCCGGTATCGTCCTGATCGCTTTGGTTTCGACT TATGGTATTTACTTCATCGCAAGTTTCTTGTACATGGATCCCTGGCATATGTTCACGTCCTCCTGGGCGTACTTT GCCGGTATGACATGTTCGATCAATATCCTGATGGTCTACGCTTTCTGCAACTGGCATGACGTTTCCTGGGGTACC AAGGGTTCTGACAAGGGCGATTCGCTCCCCGTCGCTGAGACGAAGAAAGACGACGCCAAGTCAAACTTCATTGAA GAAGTCGATAAGCCACAGGCCGATATCGACAGTCAGTTCGAATCGACGGTCAAGAGAGCACTAGAGCCATATGTT GAGCCTGAAGATAATGACGAACCAAGCATGGATGATGGCTATAAGGCTTTCCGAACCAACCTGGTGTTGATTTGG ATTTTCAGCAACCTGATCCTTGCACTGTGTATCACCAGTGAAGGCATCACCCGTCTCTGTCTCACGGTATGTATC TTGTCTAACTCCAGGCTGTGGCATAAACTAACATTCAAAGAACACTTCTACCCTTCGTACCTCCAAGTATTTCGC CGCTATTCTGTGGACGACCGCCGGTCTGTCGATTTTCCGCTTTATTGGATCCCTCTGGTTCCTGGGCAAGTCTGG TATCTTGTGCTGTGTTTCTCGCCGTTAA |