Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5153.t1
Gene name
Locationscaffold_12:40259..41271
Strand+
Gene length (bp)1012
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 8.5E-28 32 232
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.0E-19 38 232
PF08659 KR KR domain 9.0E-13 34 147
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 2.0E-07 34 157
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.0E-06 34 213

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5153.t1
MASPAPSYTKTTHSATYAGINPTQPSLSTAGKVVVITGASGGIGRATASSFAASGPRALILFGRRADALAETAAL
VRDSHPEVTIQTHEAELCDASSVRDAMNKVAAEFGGIDILIHCAGVLAPVVPLLEADPATFLDGYKTTVVGSLVT
AQAVVLANKTVSPNEDKPITFINLTTAGIIFPPFAGMGAYVSSKMAAVKVLQSFAVENPQVRLHNVHPGFLETAM
SAKLSESIKLPFAFDEISLPADFLVWIVSPEAEFLKNKIVFSSWDVDELKARKNEIFGGPPGTGELWLGYQGFPR
FIGGQALPGTQ*
Coding >Pro_DTO377G3_2|g5153.t1
ATGGCATCACCTGCGCCATCGTACACCAAGACCACTCACTCTGCCACATATGCTGGCATAAATCCAACTCAGCCC
AGCCTCTCTACTGCGGGCAAGGTTGTGGTGATTACTGGCGCATCTGGCGGCATCGGCCGGGCCACAGCCTCATCC
TTCGCTGCATCGGGCCCCCGAGCCCTCATCCTTTTCGGTCGACGCGCCGACGCCCTGGCGGAAACCGCCGCCCTT
GTCCGCGACAGCCACCCCGAGGTGACGATCCAAACTCACGAGGCTGAGCTATGCGATGCCTCGAGCGTCCGCGAC
GCCATGAACAAGGTGGCTGCCGAGTTTGGTGGTATCGACATCCTGATCCACTGTGCCGGCGTACTGGCCCCTGTT
GTTCCGCTCCTGGAAGCCGATCCGGCTACCTTCCTGGACGGCTACAAGACTACCGTAGTCGGTTCACTGGTAACG
GCACAGGCTGTCGTCCTGGCTAACAAGACAGTCAGCCCCAACGAGGACAAGCCAATCACATTCATCAATCTGACC
ACGGCTGGCATTATTTTCCCCCCATTCGCCGGCATGGGCGCCTATGTCAGCAGTAAGATGGCCGCCGTCAAGGTC
CTGCAGTCCTTCGCCGTCGAGAACCCGCAAGTGCGTCTTCACAATGTACATCCCGGTTTCCTCGAAACAGCCATG
TCTGCTAAGCTGTCAGAGTCCATTAAATTACCATTTGCCTTTGATGAAATCTCTCTTCCTGCCGACTTCCTCGTC
TGGATTGTCTCCCCCGAAGCTGAATTCCTTAAGAACAAGATCGTCTTCTCTTCTTGGGACGTCGATGAGCTCAAG
GCTCGCAAGAACGAGATTTTCGGTGGCCCGCCAGGAACTGGTGAGCTCTGGCTCGGCTACCAAGGATTCCCACGA
TTCATAGGTGGTCAGGCTTTGCCAGGTACCCAGTAG
Transcript >Pro_DTO377G3_2|g5153.t1
ATGGCATCACCTGCGCCATCGTACACCAAGACCACTCACTCTGCCACATATGCTGGCATAAATCCAACTCAGCCC
AGCCTCTCTACTGCGGGCAAGGTTGTGGTGATTACTGGCGCATCTGGCGGCATCGGCCGGGCCACAGCCTCATCC
TTCGCTGCATCGGGCCCCCGAGCCCTCATCCTTTTCGGTCGACGCGCCGACGCCCTGGCGGAAACCGCCGCCCTT
GTCCGCGACAGCCACCCCGAGGTGACGATCCAAACTCACGAGGCTGAGCTATGCGATGCCTCGAGCGTCCGCGAC
GCCATGAACAAGGTGGCTGCCGAGTTTGGTGGTATCGACATCCTGATCCACTGTGCCGGCGTACTGGCCCCTGTT
GTTCCGCTCCTGGAAGCCGATCCGGCTACCTTCCTGGACGGCTACAAGACTACCGTAGTCGGTTCACTGGTAACG
GCACAGGCTGTCGTCCTGGCTAACAAGACAGTCAGCCCCAACGAGGACAAGCCAATCACATTCATCAATCTGACC
ACGGCTGGCATTATTTTCCCCCCATTCGCCGGCATGGGCGCCTATGTCAGCAGTAAGATGGCCGCCGTCAAGGTC
CTGCAGTCCTTCGCCGTCGAGAACCCGCAAGTGCGTCTTCACAATGTACATCCCGGTTTCCTCGAAACAGCCATG
TCTGCTAAGCTGTCAGAGTCCATTAAATTACCATTTGCCTTTGATGAAATCTCTCTTCCTGCCGACTTCCTCGTC
TGGATTGTCTCCCCCGAAGCTGAATTCCTTAAGAACAAGATCGTCTTCTCTTCTTGGGACGTCGATGAGCTCAAG
GCTCGCAAGAACGAGATTTTCGGTGGCCCGCCAGGAACTGGTGAGCTCTGGCTCGGCTACCAAGGATTCCCACGA
TTCATAGGTGGTCAGGCTTTGCCAGGTACCCAGTAG
Gene >Pro_DTO377G3_2|g5153.t1
ATGGCATCACCTGCGCCATCGTACACCAAGACCACTCACTCTGCCACATATGCTGGCATAAATCCAACTCAGCCC
AGCCTCTCTACTGCGGGCAAGGTTGTGGTGATTACTGGCGCATCTGGCGGCATCGGCCGGGCCACAGCCTCATCC
TTCGCTGCATCGGGCCCCCGAGCCCTCATCCTTTTCGGTCGACGCGCCGACGCCCTGGCGGAAACCGCCGCCCTT
GTCCGCGACAGCCACCCCGAGGTGACGATCCAAACTCACGAGGCTGAGCTATGCGATGCCTCGAGCGTCCGCGAC
GCCATGAACAAGGTGGCTGCCGAGTTTGGTGGTATCGACATCCTGATCCACTGTGCCGGCGTACTGGCCCCTGTT
GTTCCGCTCCTGGAAGCCGATCCGGCTACCTTCCTGGACGGCTACAAGACTACCGTAGTCGGTTCACTGGTAACG
GCACAGGCTGTCGTCCTGGCTAACAAGACAGTCAGCCCCAACGAGGACAAGCCAATCACATTCATCAATCTGACC
ACGGCTGGCATTATTTTCCCCCCATTCGCCGGCATGGGCGCCTATGTCAGCAGTAAGATGGCCGCCGTCAAGGTC
CTGCAGTCCTTCGCCGTCGAGAACCCGCAAGTGCGTCTTCACAATGTACATCCCGGTTTCCTCGAAACAGCCATG
TCTGCTAAGCTGTCAGAGTCCATTAAATTACCATTTGCCTTTGATGAAAGTGAGTATCAACTGATTTTGTTCTTT
GTGGTTAGTCCGTCTCTGTGATCCATTAACTAATGACTACTCTTTCCCAGTCTCTCTTCCTGCCGACTTCCTCGT
CTGGATTGTCTCCCCCGAAGCTGAATTCCTTAAGAACAAGATCGTCTTCTCTTCTTGGGACGTCGATGAGCTCAA
GGCTCGCAAGAACGAGATTTTCGGTGGCCCGCCAGGAACTGGTGAGCTCTGGCTCGGCTACCAAGGATTCCCACG
ATTCATAGGTGGTCAGGCTTTGCCAGGTACCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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