Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5150.t1
Gene name
Locationscaffold_12:33749..35457
Strand+
Gene length (bp)1708
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 2.1E-12 20 83

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 91 113 22
2 126 148 22
3 173 195 22
4 202 224 22
5 256 278 22
6 285 307 22
7 322 344 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5150.t1
MRLATRLAFPIAAFTAIAATQNIPQCAADCLAAGLKNSTCTATDVDCICADKTLMANVEACSLGACTVIEGLESQ
NATATLCHWPVRDKSLIAPIATAVTGTLALAFISIRVVDCAAKKEFKWADLCAVLAFIFSLPMDIFEFFMMGSGM
GKDVWTLTEKQITNTAKYTWVTQVSYIPAIILTKVTIVCFFLHIFPGPRFRLLCQGTIVHCFLFMISTFITEILT
CIPVEEAWSGWKGESTALCYNSNSFWWAHSAINIATDLWIIGLPIPMLFGLQLKTSKKIYLVLMFSIGIVITVIS
IVRFSGLLKYSTTSNLTYNNVMVATYSVIECNVSIMCCCMPTLLSTLRRVFPTIFGSTNRSYNYNYNYNNTPFLD
TNGIQKSVTHKVTYTTPDGLEDDVVELVDRGEDYPRRK*
Coding >Pro_DTO377G3_2|g5150.t1
ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA
TGTGCAGCCGACTGTCTGGCCGCGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCC
GACAAGACACTGATGGCCAATGTCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGAGTCCCAA
AATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGGGACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACC
GGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTGGTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGAC
CTGTGCGCGGTCCTTGCATTTATCTTTTCGTTACCTATGGACATATTTGAATTCTTCATGATGGGTTCAGGGATG
GGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGTATACCTGGGTAACCCAAGTATCG
TATATCCCTGCAATTATCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTC
CGACTGCTATGCCAGGGGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACT
TGCATTCCGGTCGAAGAGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTC
TGGTGGGCGCATTCGGCAATCAACATCGCTACCGATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGA
CTCCAGCTCAAGACGAGTAAGAAGATCTACCTGGTTCTGATGTTCAGCATCGGTATCGTAATCACGGTAATTAGT
ATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATACAACAACGTCATGGTAGCAACA
TACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTCCACCCTTCGCCGAGTC
TTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAATACTCCCTTTTTGGAC
ACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCTTGAGGATGATGTAGTC
GAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG
Transcript >Pro_DTO377G3_2|g5150.t1
ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA
TGTGCAGCCGACTGTCTGGCCGCGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCC
GACAAGACACTGATGGCCAATGTCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGAGTCCCAA
AATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGGGACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACC
GGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTGGTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGAC
CTGTGCGCGGTCCTTGCATTTATCTTTTCGTTACCTATGGACATATTTGAATTCTTCATGATGGGTTCAGGGATG
GGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGTATACCTGGGTAACCCAAGTATCG
TATATCCCTGCAATTATCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTC
CGACTGCTATGCCAGGGGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACT
TGCATTCCGGTCGAAGAGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTC
TGGTGGGCGCATTCGGCAATCAACATCGCTACCGATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGA
CTCCAGCTCAAGACGAGTAAGAAGATCTACCTGGTTCTGATGTTCAGCATCGGTATCGTAATCACGGTAATTAGT
ATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATACAACAACGTCATGGTAGCAACA
TACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTCCACCCTTCGCCGAGTC
TTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAATACTCCCTTTTTGGAC
ACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCTTGAGGATGATGTAGTC
GAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG
Gene >Pro_DTO377G3_2|g5150.t1
ATGCGGTTAGCAACGCGGCTAGCATTTCCCATCGCAGCCTTTACGGCTATTGCTGCGACCCAGAACATTCCGCAA
TGTGCAGTATGAGATCTCTCCAATGATGAAACCGAGTCACGGCTGATAATGACCGCTAGGCCGACTGTCTGGCCG
CGGGTCTCAAGAATTCGACATGTACCGCGACAGACGTCGACTGCATATGCGCCGACAAGACACTGATGGCCAATG
TCGAGGCTTGCTCACTGGGAGCCTGCACCGTCATTGAAGGACTTGGTATGCCCTGGAATTCTACTCCTTGTAATA
CTGATTGACTAGGCTGACTCCATATCCCCAGAGTCCCAAAATGCCACGGCTACGCTCTGCCACTGGCCGGTCCGG
GACAAGAGTCTTATCGCTCCCATCGCGACAGCCGTTACCGGTACCTTGGCTCTCGCTTTTATCAGCATCAGAGTG
GTTGACTGTGCTGCTAAGAAGGAGTTCAAGTGGGCTGACCTGTGCGCGGTCCTTGCATTTGTGAGTGTGCCACGG
TGTGATCATGGAAGTTAGGAGTCTGGCAGCTAACCAGCAGATTAGATCTTTTCGTTACCTATGGACATATTTGAA
TTCTTCAGTGTGTTTGTCCTCGTTAACTTGAGTTATAGGTTTGTGCTAACAGCAAAGCAGTGATGGGTTCAGGGA
TGGGAAAGGACGTTTGGACCTTGACGGAAAAACAAATCACGAACACAGCGAAGGCAAGTATCATTAGGCAAAAAA
TGAGTTCCAGACTGGAGAACTAACAGCGTGGATAGTATACCTGGGTAACCCAAGTATCGTATATCCCTGCAATTA
TCCTGACCAAGGTGACCATCGTCTGCTTTTTCCTACATATCTTCCCGGGCCCCAGATTCCGACTGCTATGCCAGG
GGACTATCGTCCACTGCTTTCTGTTCATGATTTCGACTTTTATCACTGAAATTCTTACTTGCATTCCGGTCGAAG
AGGCCTGGTCAGGCTGGAAGGGCGAAAGTACAGCCCTATGCTATAATAGCAACTCCTTCTGGTGGGCGCATTCGG
TACGTCGACTTTTATCACTTGATTGATTGGATTGAGATACCAACTGACTGACCCTAGGCAATCAACATCGCTACC
GATCTATGGATCATCGGCCTGCCCATTCCAATGCTCTTCGGACTCCAGCTCAAGACGAGTAAGAAGATCTACCTG
GTTCTGATGTTCAGCATCGGTATCGTGTAAGTAGAACCCAACCGTCAACTCCTGCGACTCACTTCTCACAACTTG
ATAGAATCACGGTAATTAGTATTGTCAGGTTCTCAGGTCTGCTAAAGTACTCTACGACATCAAACTTAACATGTA
AGGCCGACGCCTTTCCTGCTCAGTGTGTTTACTTCTATTTCGTGCCCAAGCTAACCAACGTGCACAAGACAACAA
CGTCATGGTAGCAACATACAGTGTCATCGAGTGTAACGTTTCGATTATGTGCTGCTGCATGCCTACCCTACTTTC
CACCCTTCGCCGAGTCTTCCCCACGATATTCGGTAGTACCAATCGCTCTTACAATTACAACTACAATTACAACAA
TACTCCCTTTTTGGACACCAATGGGATCCAAAAGTCTGTTACACATAAGGTGACATACACGACTCCCGATGGGCT
TGAGGATGATGTAGTCGAGTTGGTGGATAGAGGCGAGGATTACCCACGGAGGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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