Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5139.t1
Gene name
Locationscaffold_12:339..2923
Strand+
Gene length (bp)2584
Transcript length (bp)1944
Coding sequence length (bp)1944
Protein length (aa) 648

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.5E-03 148 178
PF01476 LysM LysM domain 1.7E-01 431 464

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5139.t1
MQDDANPPTFCYLSPMNGTTGEPESDPCGNCGLGIMRAQLDNAVGWIDRLASQYLSSASSCGVTVPPLAEPTPVF
LSNSKTMVSNTSTTLTYTGSYMPVPTSSTCDEFAEANSVATDQLLMVNGLLGGCTNWPGNLTSLCVQATCQPYLV
RRNDTCISVSRAHKITLTQLLSWNPTIDPVCANWPTKIDHVICVGNNVGYVKPSTSFEASTTATAVSIPTNAVDG
SNTKCAKWYSVGNNDNCASITVQNGISLDDFEFLNPELNANCTNLFLDYSYCVQAVGDIATYSGYATTTTKYTSL
TADPAITWANLPTATRPVYNLTTTTSSYPLASGSLDGCFATFNNNMGALGCWEAASIFGVSVTNFLLWNPSILNG
QNYTIYNCKLTNETRYCGSFYNQTLASTSTMVWASVPTDAPANSTTECLDWYETVDGDDCDSICRSYDIPFTSLY
EWNPSVGSDCTNLWMNTPYCVMGHGWSTVGYNMSTTSSSTSATSSTGAPPAPTQSGIVVHCLEWYVAQTNDSCTA
IASAYSIILAQFNAWNPAVGENCAGLWVDEAYCVKAPTTAITTHSTAVTTSTRATMTPLAPTQAGIPSECNAYDV
AQHGDGCEVFASRNNITVDQLYTWNPALNNVCENFWLNEAYCIGVSS*
Coding >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGACGCCAACCCTCCTACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGC
GATCCATGCGGGAATTGCGGTCTGGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTT
GCTAGCCAATACCTCTCCTCTGCATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTT
CTCAGTAATTCCAAAACTATGGTCAGCAACACTTCTACAACTTTAACATACACAGGATCATATATGCCTGTTCCA
ACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTCGGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTA
CTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAGCCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTC
CGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCATAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCA
ACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGATTGACCATGTGATTTGTGTGGGCAATAATGTGGGATAT
GTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGCAACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGA
TCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAATAATGACAATTGCGCCTCGATCACTGTCCAGAATGGG
ATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGACTACTCC
TATTGTGTACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTC
ACAGCTGATCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACT
TCATCATATCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGA
TGTTGGGAAGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGG
CAGAACTACACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTTG
GCCTCAACCTCCACGATGGTTTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGAT
TGGTATGAAACTGTAGACGGCGATGACTGTGACTCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTAT
GAATGGAATCCAAGTGTTGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGTATTGTGTAATGGGACATGGC
TGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCCT
GCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGCG
ATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGAAAACTGCGCCGGC
CTTTGGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACC
TCTACCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTG
GCTCAGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTATACCTGGAAT
CCGGCTTTGAACAATGTTTGCGAAAATTTCTGGTTGAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG
Transcript >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGACGCCAACCCTCCTACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGC
GATCCATGCGGGAATTGCGGTCTGGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTT
GCTAGCCAATACCTCTCCTCTGCATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTT
CTCAGTAATTCCAAAACTATGGTCAGCAACACTTCTACAACTTTAACATACACAGGATCATATATGCCTGTTCCA
ACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTCGGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTA
CTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAGCCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTC
CGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCATAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCA
ACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGATTGACCATGTGATTTGTGTGGGCAATAATGTGGGATAT
GTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGCAACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGA
TCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAATAATGACAATTGCGCCTCGATCACTGTCCAGAATGGG
ATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGACTACTCC
TATTGTGTACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTC
ACAGCTGATCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACT
TCATCATATCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGA
TGTTGGGAAGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGG
CAGAACTACACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTTG
GCCTCAACCTCCACGATGGTTTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGAT
TGGTATGAAACTGTAGACGGCGATGACTGTGACTCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTAT
GAATGGAATCCAAGTGTTGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGTATTGTGTAATGGGACATGGC
TGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCCT
GCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGCG
ATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGAAAACTGCGCCGGC
CTTTGGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACC
TCTACCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTG
GCTCAGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTATACCTGGAAT
CCGGCTTTGAACAATGTTTGCGAAAATTTCTGGTTGAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG
Gene >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGAGTGCGTTGGTTGCCTCCAATTGCAAGATATATCTTTGCTTATGAATATACAGCGCCAACCCTCC
TACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGCGATCCATGCGGGAATTGCGGTCT
GGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTTGCTAGCCAATACCTCTCCTCTGC
ATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTTCTCAGTAATTCCAAGTATGCATC
CCTCCTTGATAGAGTAAGGCTTCACTGACTAAATATTTCCTTGATCAAAAGAACTATGGTCAGCAACACTTCTAC
AACTTTAACATACACAGGATCATATATGCCTGTTCCAACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTC
GGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTACTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAG
CCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTCCGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCA
TAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCAACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGAT
TGACCATGTGATTTGTGTGGGCAATAATGTGGGATATGTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGC
AACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGATCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAA
TAATGGTGCGTTATCTTGCGCTTCACTATGAGCATTACTAATGATCTAGACAATTGCGCCTCGATCACTGTCCAG
AATGGGATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGGT
AAGTGTTCCCTAGTTTCCTTCCTCTTGTGTTTCTGGATGGGCTCATTTCCGTTCCGTAGACTACTCCTATTGTGT
ACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTCACAGCTGA
TCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACTTCATCATA
TCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGATGTTGGGA
AGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGGCAGAACTA
CACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTGTGAGTCTTT
TTCTTTGCAACGAAAAGAGTCAAACACCATACTTATATTCTTCTTCTATCCAGTGGCCTCAACCTCCACGATGGT
TTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGATTGGTATGAAACTGTAGACGG
TCAGTCCACGTCGACCCACGAGTCAGCGATAAAATACTAAATCAGGAGGACCTGACTACAGGCGATGACTGTGAC
TCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTATGAATGGAATCCAAGTGTTGGTATGTTGCATCAG
TGAAGGTTGTGTCTTCTTTGCTTCTTACATATTTTTAGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGGT
AAGAAACAACGTCATGGCCGTCAAACCGAAACAGAGCTTATACGAATATGTCTAGTATTGTGTAATGGGACATGG
CTGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCC
TGCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGC
GATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGGTAAATATTCTCG
AATCATCCTCTATCCCTGCCGACTACATAAGTACCTTGTACTCACACAGAATCACAGAAAACTGCGCCGGCCTTT
GGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACCTCTA
CCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTGGCTC
AGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTGTGAGTAGACTCCAT
TTACGGAATAATGTTGAAGCTCGACATTAACTATTCGCATAGATACCTGGAATCCGGCTTTGAACAATGTTTGCG
AAAAGTAAGTTGTTGAACCCTTCTGGTTCACTTGGGTGGAATACTAATAATGTTCTTTGAAAACAGTTTCTGGTT
GAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail