Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5139.t1
Gene name
Locationscaffold_12:339..2923
Strand+
Gene length (bp)2584
Transcript length (bp)1944
Coding sequence length (bp)1944
Protein length (aa) 648

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.6E-03 148 178
PF01476 LysM LysM domain 1.8E-01 431 464

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup495
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g9582.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g10339.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g10354.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g10332.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g10343.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g9711.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g9744.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g10175.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g6281.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g7445.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g9707.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8889.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g10030.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g10142.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g10283.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g10299.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g10304.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g8520.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g9987.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g9670.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g6242.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g7185.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g9812.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g8716.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5025.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g10358.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g10345.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g9658.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g9363.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9785.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g9620.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g9907.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g7158.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g6667.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g5139.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5139.t1
MQDDANPPTFCYLSPMNGTTGEPESDPCGNCGLGIMRAQLDNAVGWIDRLASQYLSSASSCGVTVPPLAEPTPVF
LSNSKTMVSNTSTTLTYTGSYMPVPTSSTCDEFAEANSVATDQLLMVNGLLGGCTNWPGNLTSLCVQATCQPYLV
RRNDTCISVSRAHKITLTQLLSWNPTIDPVCANWPTKIDHVICVGNNVGYVKPSTSFEASTTATAVSIPTNAVDG
SNTKCAKWYSVGNNDNCASITVQNGISLDDFEFLNPELNANCTNLFLDYSYCVQAVGDIATYSGYATTTTKYTSL
TADPAITWANLPTATRPVYNLTTTTSSYPLASGSLDGCFATFNNNMGALGCWEAASIFGVSVTNFLLWNPSILNG
QNYTIYNCKLTNETRYCGSFYNQTLASTSTMVWASVPTDAPANSTTECLDWYETVDGDDCDSICRSYDIPFTSLY
EWNPSVGSDCTNLWMNTPYCVMGHGWSTVGYNMSTTSSSTSATSSTGAPPAPTQSGIVVHCLEWYVAQTNDSCTA
IASAYSIILAQFNAWNPAVGENCAGLWVDEAYCVKAPTTAITTHSTAVTTSTRATMTPLAPTQAGIPSECNAYDV
AQHGDGCEVFASRNNITVDQLYTWNPALNNVCENFWLNEAYCIGVSS*
Coding >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGACGCCAACCCTCCTACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGC
GATCCATGCGGGAATTGCGGTCTGGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTT
GCTAGCCAATACCTCTCCTCTGCATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTT
CTCAGTAATTCCAAAACTATGGTCAGCAACACTTCTACAACTTTAACATACACAGGATCATATATGCCTGTTCCA
ACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTCGGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTA
CTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAGCCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTC
CGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCATAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCA
ACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGATTGACCATGTGATTTGTGTGGGCAATAATGTGGGATAT
GTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGCAACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGA
TCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAATAATGACAATTGCGCCTCGATCACTGTCCAGAATGGG
ATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGACTACTCC
TATTGTGTACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTC
ACAGCTGATCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACT
TCATCATATCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGA
TGTTGGGAAGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGG
CAGAACTACACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTTG
GCCTCAACCTCCACGATGGTTTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGAT
TGGTATGAAACTGTAGACGGCGATGACTGTGACTCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTAT
GAATGGAATCCAAGTGTTGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGTATTGTGTAATGGGACATGGC
TGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCCT
GCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGCG
ATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGAAAACTGCGCCGGC
CTTTGGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACC
TCTACCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTG
GCTCAGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTATACCTGGAAT
CCGGCTTTGAACAATGTTTGCGAAAATTTCTGGTTGAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG
Transcript >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGACGCCAACCCTCCTACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGC
GATCCATGCGGGAATTGCGGTCTGGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTT
GCTAGCCAATACCTCTCCTCTGCATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTT
CTCAGTAATTCCAAAACTATGGTCAGCAACACTTCTACAACTTTAACATACACAGGATCATATATGCCTGTTCCA
ACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTCGGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTA
CTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAGCCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTC
CGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCATAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCA
ACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGATTGACCATGTGATTTGTGTGGGCAATAATGTGGGATAT
GTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGCAACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGA
TCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAATAATGACAATTGCGCCTCGATCACTGTCCAGAATGGG
ATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGACTACTCC
TATTGTGTACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTC
ACAGCTGATCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACT
TCATCATATCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGA
TGTTGGGAAGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGG
CAGAACTACACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTTG
GCCTCAACCTCCACGATGGTTTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGAT
TGGTATGAAACTGTAGACGGCGATGACTGTGACTCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTAT
GAATGGAATCCAAGTGTTGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGTATTGTGTAATGGGACATGGC
TGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCCT
GCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGCG
ATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGAAAACTGCGCCGGC
CTTTGGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACC
TCTACCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTG
GCTCAGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTATACCTGGAAT
CCGGCTTTGAACAATGTTTGCGAAAATTTCTGGTTGAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG
Gene >Pro_DTO377G3_2|g5139.t1
ATGCAAGATGAGTGCGTTGGTTGCCTCCAATTGCAAGATATATCTTTGCTTATGAATATACAGCGCCAACCCTCC
TACATTTTGTTACCTTTCGCCTATGAACGGCACCACCGGTGAGCCCGAAAGCGATCCATGCGGGAATTGCGGTCT
GGGAATTATGAGAGCACAGCTCGATAATGCAGTGGGGTGGATTGACCGGCTTGCTAGCCAATACCTCTCCTCTGC
ATCTTCGTGTGGTGTCACAGTACCGCCGTTAGCTGAGCCTACGCCCGTATTTCTCAGTAATTCCAAGTATGCATC
CCTCCTTGATAGAGTAAGGCTTCACTGACTAAATATTTCCTTGATCAAAAGAACTATGGTCAGCAACACTTCTAC
AACTTTAACATACACAGGATCATATATGCCTGTTCCAACTAGCAGCACTTGTGATGAATTTGCAGAGGCAAACTC
GGTTGCAACTGATCAGCTTTTAATGGTCAATGGACTACTTGGTGGCTGTACAAATTGGCCAGGAAACCTTACGAG
CCTGTGTGTGCAGGCAACTTGTCAGCCCTACCTGGTCCGACGAAATGATACCTGCATCAGTGTTTCACGTGCTCA
TAAGATTACGCTCACACAGCTTCTTTCGTGGAATCCAACAATCGATCCTGTCTGTGCTAATTGGCCCACCAAGAT
TGACCATGTGATTTGTGTGGGCAATAATGTGGGATATGTTAAGCCGAGTACATCTTTCGAAGCTTCTACCACTGC
AACTGCTGTTTCCATTCCTACCAACGCCGTCGATGGATCTAATACCAAGTGTGCGAAATGGTATAGTGTTGGGAA
TAATGGTGCGTTATCTTGCGCTTCACTATGAGCATTACTAATGATCTAGACAATTGCGCCTCGATCACTGTCCAG
AATGGGATTAGTCTGGATGACTTTGAGTTCCTCAACCCTGAACTCAACGCGAACTGCACAAACCTCTTTCTCGGT
AAGTGTTCCCTAGTTTCCTTCCTCTTGTGTTTCTGGATGGGCTCATTTCCGTTCCGTAGACTACTCCTATTGTGT
ACAGGCTGTCGGTGATATAGCCACCTACTCCGGATATGCCACAACCACAACCAAGTACACAAGCCTCACAGCTGA
TCCAGCCATAACTTGGGCCAATCTTCCCACGGCGACTCGGCCCGTTTACAACCTAACTACGACAACTTCATCATA
TCCACTGGCCTCGGGCTCTTTGGACGGATGTTTTGCCACTTTCAATAACAACATGGGTGCGCTTGGATGTTGGGA
AGCGGCGTCCATATTTGGTGTCAGTGTGACAAACTTCCTGCTATGGAACCCTAGTATCTTGAACGGGCAGAACTA
CACAATTTATAATTGCAAGCTGACAAATGAGACACGATACTGTGGTTCATTCTACAACCAAACTTGTGAGTCTTT
TTCTTTGCAACGAAAAGAGTCAAACACCATACTTATATTCTTCTTCTATCCAGTGGCCTCAACCTCCACGATGGT
TTGGGCTTCAGTTCCGACTGATGCCCCGGCTAATTCTACAACTGAATGTCTCGATTGGTATGAAACTGTAGACGG
TCAGTCCACGTCGACCCACGAGTCAGCGATAAAATACTAAATCAGGAGGACCTGACTACAGGCGATGACTGTGAC
TCAATTTGCCGGTCATACGACATTCCTTTCACGTCACTGTATGAATGGAATCCAAGTGTTGGTATGTTGCATCAG
TGAAGGTTGTGTCTTCTTTGCTTCTTACATATTTTTAGGGTCTGATTGCACTAACCTTTGGATGAATACCCCGGT
AAGAAACAACGTCATGGCCGTCAAACCGAAACAGAGCTTATACGAATATGTCTAGTATTGTGTAATGGGACATGG
CTGGTCTACCGTCGGCTATAACATGAGCACCACTTCATCTAGCACTTCCGCAACTTCTTCCACCGGGGCCCCCCC
TGCCCCGACGCAGTCTGGCATTGTTGTCCATTGCCTGGAGTGGTACGTGGCTCAGACAAACGACTCTTGCACGGC
GATTGCATCAGCATATAGCATCATACTTGCCCAGTTCAACGCATGGAATCCGGCTGTCGGAGGTAAATATTCTCG
AATCATCCTCTATCCCTGCCGACTACATAAGTACCTTGTACTCACACAGAATCACAGAAAACTGCGCCGGCCTTT
GGGTAGATGAAGCATACTGTGTGAAAGCCCCCACCACTGCTATAACGACCCACTCTACTGCGGTGACTACCTCTA
CCCGAGCAACTATGACGCCACTAGCACCAACCCAGGCAGGAATTCCCTCTGAATGCAACGCATACGATGTGGCTC
AGCACGGTGATGGATGCGAAGTGTTCGCTTCTCGTAACAATATCACAGTTGATCAGCTTTGTGAGTAGACTCCAT
TTACGGAATAATGTTGAAGCTCGACATTAACTATTCGCATAGATACCTGGAATCCGGCTTTGAACAATGTTTGCG
AAAAGTAAGTTGTTGAACCCTTCTGGTTCACTTGGGTGGAATACTAATAATGTTCTTTGAAAACAGTTTCTGGTT
GAACGAAGCTTACTGCATCGGTGTCTCGTCTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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