© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g512.t1 |
| Gene name | |
| Location | scaffold_01:1304048..1304858 |
| Strand | + |
| Gene length (bp) | 810 |
| Transcript length (bp) | 810 |
| Coding sequence length (bp) | 810 |
| Protein length (aa) | 270 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05739 | SNARE | SNARE domain | 4.6E-07 | 216 | 267 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 249 | 268 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g512.t1 MTNPSQLFLLADHIKLSLLERERAISLDLEPNSQDGEISWSLESLRESIEALEAEQTRLANSHDSAGAAALKDQL TPLQAQYKDLSIQFYGADGEPSSTNTTQASNPATPDLKQPIPQHPPSKSVRFMDSSAAAAAVQDEIDEEDERNRS NLFRPYRDEPSPRLDHSNMDNLQIYDHHAQTMRDQDDQLDRLGESIGRQHQLSIQIGDELDGHIQLLDGMDGDVE RQQTRLNGARRRIDKIRRKASENWSMMTIIGLIIILVILIVILK* |
| Coding | >Pro_DTO377G3_2|g512.t1 ATGACGAACCCTTCCCAGCTCTTCCTACTCGCCGATCACATCAAATTATCCCTTTTGGAGCGCGAAAGAGCAATC TCACTCGATCTCGAGCCTAATTCCCAAGATGGAGAGATCTCTTGGTCTCTCGAGTCCCTCCGAGAAAGCATAGAG GCACTGGAAGCCGAACAAACCCGGCTAGCAAACTCGCACGACAGCGCAGGCGCCGCCGCCCTGAAAGACCAACTC ACCCCTCTCCAAGCCCAATATAAAGACCTGTCGATCCAGTTTTACGGCGCAGATGGCGAGCCATCGAGCACCAAC ACGACGCAGGCGTCAAATCCCGCTACCCCCGATCTCAAGCAGCCAATTCCCCAACATCCACCTTCCAAATCCGTC CGCTTCATGGACAGCTCCGCAGCAGCGGCAGCCGTGCAAGATGAGATTGACGAGGAAGACGAGCGCAACCGCAGC AACCTCTTCCGTCCATACCGCGATGAGCCATCGCCGCGACTGGATCACTCCAACATGGACAACCTGCAGATTTAC GACCATCACGCTCAAACCATGCGCGACCAGGATGACCAGTTGGATCGGCTGGGTGAATCAATTGGCAGGCAACAT CAGCTGAGTATTCAGATTGGAGATGAGCTGGATGGCCATATTCAACTTCTGGATGGAATGGATGGGGACGTCGAG CGTCAACAGACCCGACTGAACGGTGCGAGACGGCGGATAGATAAGATCCGTCGAAAGGCGAGCGAGAACTGGAGC ATGATGACTATCATTGGATTGATCATTATTCTGGTCATCTTGATTGTGATTCTGAAATGA |
| Transcript | >Pro_DTO377G3_2|g512.t1 ATGACGAACCCTTCCCAGCTCTTCCTACTCGCCGATCACATCAAATTATCCCTTTTGGAGCGCGAAAGAGCAATC TCACTCGATCTCGAGCCTAATTCCCAAGATGGAGAGATCTCTTGGTCTCTCGAGTCCCTCCGAGAAAGCATAGAG GCACTGGAAGCCGAACAAACCCGGCTAGCAAACTCGCACGACAGCGCAGGCGCCGCCGCCCTGAAAGACCAACTC ACCCCTCTCCAAGCCCAATATAAAGACCTGTCGATCCAGTTTTACGGCGCAGATGGCGAGCCATCGAGCACCAAC ACGACGCAGGCGTCAAATCCCGCTACCCCCGATCTCAAGCAGCCAATTCCCCAACATCCACCTTCCAAATCCGTC CGCTTCATGGACAGCTCCGCAGCAGCGGCAGCCGTGCAAGATGAGATTGACGAGGAAGACGAGCGCAACCGCAGC AACCTCTTCCGTCCATACCGCGATGAGCCATCGCCGCGACTGGATCACTCCAACATGGACAACCTGCAGATTTAC GACCATCACGCTCAAACCATGCGCGACCAGGATGACCAGTTGGATCGGCTGGGTGAATCAATTGGCAGGCAACAT CAGCTGAGTATTCAGATTGGAGATGAGCTGGATGGCCATATTCAACTTCTGGATGGAATGGATGGGGACGTCGAG CGTCAACAGACCCGACTGAACGGTGCGAGACGGCGGATAGATAAGATCCGTCGAAAGGCGAGCGAGAACTGGAGC ATGATGACTATCATTGGATTGATCATTATTCTGGTCATCTTGATTGTGATTCTGAAATGA |
| Gene | >Pro_DTO377G3_2|g512.t1 ATGACGAACCCTTCCCAGCTCTTCCTACTCGCCGATCACATCAAATTATCCCTTTTGGAGCGCGAAAGAGCAATC TCACTCGATCTCGAGCCTAATTCCCAAGATGGAGAGATCTCTTGGTCTCTCGAGTCCCTCCGAGAAAGCATAGAG GCACTGGAAGCCGAACAAACCCGGCTAGCAAACTCGCACGACAGCGCAGGCGCCGCCGCCCTGAAAGACCAACTC ACCCCTCTCCAAGCCCAATATAAAGACCTGTCGATCCAGTTTTACGGCGCAGATGGCGAGCCATCGAGCACCAAC ACGACGCAGGCGTCAAATCCCGCTACCCCCGATCTCAAGCAGCCAATTCCCCAACATCCACCTTCCAAATCCGTC CGCTTCATGGACAGCTCCGCAGCAGCGGCAGCCGTGCAAGATGAGATTGACGAGGAAGACGAGCGCAACCGCAGC AACCTCTTCCGTCCATACCGCGATGAGCCATCGCCGCGACTGGATCACTCCAACATGGACAACCTGCAGATTTAC GACCATCACGCTCAAACCATGCGCGACCAGGATGACCAGTTGGATCGGCTGGGTGAATCAATTGGCAGGCAACAT CAGCTGAGTATTCAGATTGGAGATGAGCTGGATGGCCATATTCAACTTCTGGATGGAATGGATGGGGACGTCGAG CGTCAACAGACCCGACTGAACGGTGCGAGACGGCGGATAGATAAGATCCGTCGAAAGGCGAGCGAGAACTGGAGC ATGATGACTATCATTGGATTGATCATTATTCTGGTCATCTTGATTGTGATTCTGAAATGA |