Protein ID | Pro_DTO377G3_2|g5117.t1 |
Gene name | |
Location | scaffold_11:624585..627602 |
Strand | - |
Gene length (bp) | 3017 |
Transcript length (bp) | 2958 |
Coding sequence length (bp) | 2958 |
Protein length (aa) | 986 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00580 | UvrD-helicase | UvrD/REP helicase N-terminal domain | 1.7E-60 | 8 | 263 |
PF13361 | UvrD_C | UvrD-like helicase C-terminal domain | 3.9E-60 | 270 | 638 |
PF13245 | AAA_19 | AAA domain | 3.5E-31 | 12 | 249 |
PF13538 | UvrD_C_2 | UvrD-like helicase C-terminal domain | 1.6E-13 | 583 | 637 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016787 | hydrolase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0003824 | catalytic activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
GO:0003674 | molecular_function | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 33 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5117.t1 MDPILDGLNHAQREAVTSSGSILQVLAPPGSGKTKTLTARVAYLLSHHGYQPQDVICCTFTIKASREMRERLAKL IGEKLESRLILGTFHSICRRYLVKYGYLIGLRKGFGIADSDDTRAIIRRTIKRLKSSIEVKAAQGRISRHKAHGL SPDALADRAKAEELELVDIYRDYESALAASNLLDYDDLLLRCGDLLRDHPECVSNVQAVLVDEFQDTNIIQYELM NLFASKNRRITIVGDPDQSIYGFRSAEIQNLKRMQHRYSNTTVVLLEDNYRSAGSILNAAQEVIEQDTSRPAKAL LATHSFGTLPVLRRLPNPNAEAQWMVLEIKRCAAMTGGLLRMSDFAVLLRSASLSTQIETAFGRAGIPYKMVGGR KFFDRTEVKILLNYMRVVSHTGHSDALMNIVNVPPRRIGDETIKQLTSGAEKAKIPLWDFIKDVIQGRRSTEKKL QKAAEQGLCVLINLIEASRQKLQECEDASAPRVLIEFIAERLSFQEYLIRAYPLDEDSRWANVKELMHQASEVAA FEEEVDKEMDLPEIEGVQQQQAHPGEEALTRFLANVALATEITTKEEAKEGNQPQEKVTISTIHAAKGLEWPVVF VPAVYNGSIPHSRAEVIEEERRLLYVAMTRAQALLYLSVPIRQPRLGEGEAGATTLTPFLPPKLTKSRFRSTGPS LHEKVVYAIADILRRPRPSLDDIYKGLEFLPSTLDDRWTPEGEEDRSKFDGTSTSHDASGEPNPKRRRADMNQGP KSTTYISSTGYTMNNSTGFTIPPTGLSGFTSARDYIAANPEPPAESASKADADADAAGTNRPKPLSSASRKDGLT QASISNFFAGPGSSQKREPVLPRYPQPPSQNQRSGARSIVPSTLSSHRVQPRPLIPTRPTLEPTDPNGYTWLATP SKPTTLKAARMSKTQEQNGNSTSAGGTAGADEVKPESSTGFQPVSTFHSTTMSMIQQAPRRTLGIRRSMNGWQDR MKREGGGQAS* |
Coding | >Pro_DTO377G3_2|g5117.t1 ATGGATCCGATTTTAGACGGCTTGAATCATGCCCAGCGGGAAGCCGTCACTTCATCTGGCTCAATCCTGCAAGTG CTCGCACCGCCGGGCTCGGGTAAGACAAAAACATTGACCGCACGCGTCGCGTACCTCCTCTCGCACCACGGATAC CAACCGCAAGATGTTATATGCTGCACATTCACCATCAAGGCCAGCCGTGAGATGCGGGAGCGGCTCGCAAAACTC ATTGGAGAAAAACTCGAATCGCGCTTGATTCTCGGCACCTTTCATTCCATCTGTCGCCGCTACTTGGTCAAGTAC GGATACTTGATCGGCCTGCGGAAGGGGTTTGGCATTGCGGATTCGGATGATACCCGCGCAATTATCAGAAGAACC ATTAAACGACTGAAGTCTAGCATTGAAGTCAAGGCGGCGCAAGGCCGAATTTCTCGACATAAAGCACATGGACTC AGTCCTGATGCCCTGGCTGACAGAGCCAAAGCAGAGGAGTTGGAGCTTGTTGATATCTATCGTGACTACGAATCA GCGCTGGCCGCCTCCAATCTCTTGGATTATGATGACCTCCTTCTGCGGTGTGGGGATCTGCTCCGAGACCACCCA GAATGTGTCTCAAATGTGCAGGCCGTCTTGGTGGATGAGTTCCAGGACACCAACATCATACAATATGAACTGATG AACCTCTTCGCATCTAAGAACCGACGGATCACCATCGTCGGAGATCCGGATCAAAGCATCTACGGGTTTCGTTCT GCGGAGATCCAGAATCTCAAGCGGATGCAGCACCGATATTCAAACACGACGGTTGTACTGTTGGAAGACAATTAC CGCTCTGCAGGTTCTATCTTGAATGCAGCCCAAGAAGTGATTGAGCAGGATACGAGCCGGCCTGCAAAGGCATTG CTAGCTACGCACTCCTTCGGAACCTTGCCCGTGCTAAGAAGACTCCCAAATCCCAACGCAGAGGCGCAGTGGATG GTACTTGAGATCAAGCGATGTGCAGCGATGACCGGCGGTCTACTGCGCATGTCTGACTTTGCTGTCCTGCTTCGG TCGGCTTCGCTGTCTACACAAATCGAAACAGCTTTTGGAAGGGCGGGTATACCGTACAAGATGGTTGGAGGCAGA AAATTCTTTGACCGAACTGAAGTCAAGATTCTTCTCAATTATATGAGGGTGGTGAGCCATACGGGACATTCGGAC GCGTTGATGAATATTGTGAATGTTCCGCCACGAAGAATTGGCGATGAGACAATCAAGCAATTGACTAGCGGTGCG GAGAAGGCCAAAATTCCTCTATGGGACTTCATCAAGGATGTCATCCAAGGGCGTCGTTCGACTGAGAAGAAACTA CAAAAAGCTGCAGAGCAGGGACTCTGCGTTCTAATCAATTTGATTGAAGCCTCTAGACAGAAGTTGCAAGAGTGC GAGGATGCATCCGCTCCACGTGTTCTGATTGAGTTCATTGCCGAACGCCTCTCATTCCAAGAATATCTCATCAGA GCATATCCCCTAGACGAAGACAGTCGCTGGGCGAATGTTAAAGAATTGATGCATCAAGCCAGTGAAGTCGCAGCA TTCGAGGAGGAGGTTGATAAAGAAATGGATCTCCCTGAAATCGAAGGTGTGCAACAACAGCAGGCACATCCTGGC GAGGAGGCTCTCACTCGGTTCCTGGCGAATGTCGCCTTGGCTACGGAGATTACAACCAAAGAAGAAGCCAAAGAG GGAAACCAACCGCAAGAGAAAGTCACGATTTCAACTATCCACGCTGCTAAGGGCCTGGAGTGGCCAGTCGTATTT GTTCCTGCAGTGTACAACGGGAGCATTCCTCACTCGCGTGCTGAGGTAATAGAAGAAGAGAGACGATTGCTGTAT GTCGCGATGACAAGAGCGCAGGCCCTGTTATACCTGAGTGTTCCTATTCGACAACCGCGGTTAGGAGAAGGAGAA GCTGGTGCCACCACTTTGACGCCATTCCTTCCTCCCAAATTGACCAAATCGCGCTTCCGGTCAACGGGGCCGTCT CTCCATGAGAAGGTGGTGTATGCAATTGCCGATATTCTGCGTCGCCCGCGGCCATCTTTAGACGACATTTACAAG GGGCTCGAGTTTCTTCCATCGACGCTGGACGACCGATGGACACCCGAGGGCGAGGAGGACCGCAGCAAATTCGAT GGCACATCTACCTCTCACGACGCGTCTGGCGAGCCCAATCCAAAGCGTCGGCGGGCAGACATGAACCAGGGTCCA AAATCGACCACCTACATCTCATCGACCGGGTATACCATGAACAACTCGACAGGGTTTACGATTCCTCCAACTGGT CTATCGGGTTTTACGTCTGCCCGGGATTACATAGCGGCCAACCCCGAACCCCCCGCGGAGTCAGCCTCAAAGGCT GATGCAGATGCAGATGCAGCTGGGACAAACAGACCGAAACCGCTCAGCAGCGCAAGCCGTAAAGACGGACTCACA CAGGCAAGCATATCCAACTTTTTTGCAGGCCCAGGATCCTCCCAGAAGAGAGAACCAGTTCTGCCTCGCTATCCA CAGCCACCATCGCAGAACCAACGCTCAGGAGCAAGAAGCATTGTCCCATCTACCCTCTCCTCTCACCGTGTTCAG CCACGACCACTTATTCCAACAAGGCCGACCCTGGAGCCCACGGACCCGAATGGTTACACGTGGCTGGCAACTCCA TCCAAACCAACAACCCTGAAAGCTGCCAGGATGTCGAAGACGCAGGAACAGAACGGCAATAGTACATCCGCAGGC GGAACAGCCGGGGCAGACGAGGTGAAACCCGAGAGCTCCACCGGGTTCCAGCCGGTGTCGACGTTTCACAGCACG ACGATGTCAATGATCCAACAAGCACCGCGACGGACGTTGGGAATTCGGCGGAGCATGAACGGGTGGCAAGACCGG ATGAAGCGCGAGGGCGGTGGACAGGCGAGCTGA |
Transcript | >Pro_DTO377G3_2|g5117.t1 ATGGATCCGATTTTAGACGGCTTGAATCATGCCCAGCGGGAAGCCGTCACTTCATCTGGCTCAATCCTGCAAGTG CTCGCACCGCCGGGCTCGGGTAAGACAAAAACATTGACCGCACGCGTCGCGTACCTCCTCTCGCACCACGGATAC CAACCGCAAGATGTTATATGCTGCACATTCACCATCAAGGCCAGCCGTGAGATGCGGGAGCGGCTCGCAAAACTC ATTGGAGAAAAACTCGAATCGCGCTTGATTCTCGGCACCTTTCATTCCATCTGTCGCCGCTACTTGGTCAAGTAC GGATACTTGATCGGCCTGCGGAAGGGGTTTGGCATTGCGGATTCGGATGATACCCGCGCAATTATCAGAAGAACC ATTAAACGACTGAAGTCTAGCATTGAAGTCAAGGCGGCGCAAGGCCGAATTTCTCGACATAAAGCACATGGACTC AGTCCTGATGCCCTGGCTGACAGAGCCAAAGCAGAGGAGTTGGAGCTTGTTGATATCTATCGTGACTACGAATCA GCGCTGGCCGCCTCCAATCTCTTGGATTATGATGACCTCCTTCTGCGGTGTGGGGATCTGCTCCGAGACCACCCA GAATGTGTCTCAAATGTGCAGGCCGTCTTGGTGGATGAGTTCCAGGACACCAACATCATACAATATGAACTGATG AACCTCTTCGCATCTAAGAACCGACGGATCACCATCGTCGGAGATCCGGATCAAAGCATCTACGGGTTTCGTTCT GCGGAGATCCAGAATCTCAAGCGGATGCAGCACCGATATTCAAACACGACGGTTGTACTGTTGGAAGACAATTAC CGCTCTGCAGGTTCTATCTTGAATGCAGCCCAAGAAGTGATTGAGCAGGATACGAGCCGGCCTGCAAAGGCATTG CTAGCTACGCACTCCTTCGGAACCTTGCCCGTGCTAAGAAGACTCCCAAATCCCAACGCAGAGGCGCAGTGGATG GTACTTGAGATCAAGCGATGTGCAGCGATGACCGGCGGTCTACTGCGCATGTCTGACTTTGCTGTCCTGCTTCGG TCGGCTTCGCTGTCTACACAAATCGAAACAGCTTTTGGAAGGGCGGGTATACCGTACAAGATGGTTGGAGGCAGA AAATTCTTTGACCGAACTGAAGTCAAGATTCTTCTCAATTATATGAGGGTGGTGAGCCATACGGGACATTCGGAC GCGTTGATGAATATTGTGAATGTTCCGCCACGAAGAATTGGCGATGAGACAATCAAGCAATTGACTAGCGGTGCG GAGAAGGCCAAAATTCCTCTATGGGACTTCATCAAGGATGTCATCCAAGGGCGTCGTTCGACTGAGAAGAAACTA CAAAAAGCTGCAGAGCAGGGACTCTGCGTTCTAATCAATTTGATTGAAGCCTCTAGACAGAAGTTGCAAGAGTGC GAGGATGCATCCGCTCCACGTGTTCTGATTGAGTTCATTGCCGAACGCCTCTCATTCCAAGAATATCTCATCAGA GCATATCCCCTAGACGAAGACAGTCGCTGGGCGAATGTTAAAGAATTGATGCATCAAGCCAGTGAAGTCGCAGCA TTCGAGGAGGAGGTTGATAAAGAAATGGATCTCCCTGAAATCGAAGGTGTGCAACAACAGCAGGCACATCCTGGC GAGGAGGCTCTCACTCGGTTCCTGGCGAATGTCGCCTTGGCTACGGAGATTACAACCAAAGAAGAAGCCAAAGAG GGAAACCAACCGCAAGAGAAAGTCACGATTTCAACTATCCACGCTGCTAAGGGCCTGGAGTGGCCAGTCGTATTT GTTCCTGCAGTGTACAACGGGAGCATTCCTCACTCGCGTGCTGAGGTAATAGAAGAAGAGAGACGATTGCTGTAT GTCGCGATGACAAGAGCGCAGGCCCTGTTATACCTGAGTGTTCCTATTCGACAACCGCGGTTAGGAGAAGGAGAA GCTGGTGCCACCACTTTGACGCCATTCCTTCCTCCCAAATTGACCAAATCGCGCTTCCGGTCAACGGGGCCGTCT CTCCATGAGAAGGTGGTGTATGCAATTGCCGATATTCTGCGTCGCCCGCGGCCATCTTTAGACGACATTTACAAG GGGCTCGAGTTTCTTCCATCGACGCTGGACGACCGATGGACACCCGAGGGCGAGGAGGACCGCAGCAAATTCGAT GGCACATCTACCTCTCACGACGCGTCTGGCGAGCCCAATCCAAAGCGTCGGCGGGCAGACATGAACCAGGGTCCA AAATCGACCACCTACATCTCATCGACCGGGTATACCATGAACAACTCGACAGGGTTTACGATTCCTCCAACTGGT CTATCGGGTTTTACGTCTGCCCGGGATTACATAGCGGCCAACCCCGAACCCCCCGCGGAGTCAGCCTCAAAGGCT GATGCAGATGCAGATGCAGCTGGGACAAACAGACCGAAACCGCTCAGCAGCGCAAGCCGTAAAGACGGACTCACA CAGGCAAGCATATCCAACTTTTTTGCAGGCCCAGGATCCTCCCAGAAGAGAGAACCAGTTCTGCCTCGCTATCCA CAGCCACCATCGCAGAACCAACGCTCAGGAGCAAGAAGCATTGTCCCATCTACCCTCTCCTCTCACCGTGTTCAG CCACGACCACTTATTCCAACAAGGCCGACCCTGGAGCCCACGGACCCGAATGGTTACACGTGGCTGGCAACTCCA TCCAAACCAACAACCCTGAAAGCTGCCAGGATGTCGAAGACGCAGGAACAGAACGGCAATAGTACATCCGCAGGC GGAACAGCCGGGGCAGACGAGGTGAAACCCGAGAGCTCCACCGGGTTCCAGCCGGTGTCGACGTTTCACAGCACG ACGATGTCAATGATCCAACAAGCACCGCGACGGACGTTGGGAATTCGGCGGAGCATGAACGGGTGGCAAGACCGG ATGAAGCGCGAGGGCGGTGGACAGGCGAGCTGA |
Gene | >Pro_DTO377G3_2|g5117.t1 ATGGATCCGATTTTAGACGGCTTGAATCATGCCCAGCGGGAAGCCGTCACTTCATCTGGCTCAATCCTGCAAGTG CTCGCACCGCCGGGCTCGGGTAAGACAAAAACATTGACCGCACGCGTCGCGTACCTCCTCTCGCACCACGGATAC CAACCGCAAGATGTTATATGCTGCACATTCACCATCAAGGCCAGCCGTGAGATGCGGGAGCGGCTCGCAAAACTC ATTGGAGAAAAACTCGAATCGCGCTTGATTCTCGGCACCTTTCATTCCATCTGTCGCCGCTACTTGGTCAAGTAC GGATACTTGATCGGCCTGCGGAAGGGGTTTGGCATTGCGGATTCGGATGATACCCGCGCAATTATCAGAGTATGA GTAGTACTTTTAAATTATATCAATTTGTTTCTATTCTCTAATTGTCACTACAGAGAACCATTAAACGACTGAAGT CTAGCATTGAAGTCAAGGCGGCGCAAGGCCGAATTTCTCGACATAAAGCACATGGACTCAGTCCTGATGCCCTGG CTGACAGAGCCAAAGCAGAGGAGTTGGAGCTTGTTGATATCTATCGTGACTACGAATCAGCGCTGGCCGCCTCCA ATCTCTTGGATTATGATGACCTCCTTCTGCGGTGTGGGGATCTGCTCCGAGACCACCCAGAATGTGTCTCAAATG TGCAGGCCGTCTTGGTGGATGAGTTCCAGGACACCAACATCATACAATATGAACTGATGAACCTCTTCGCATCTA AGAACCGACGGATCACCATCGTCGGAGATCCGGATCAAAGCATCTACGGGTTTCGTTCTGCGGAGATCCAGAATC TCAAGCGGATGCAGCACCGATATTCAAACACGACGGTTGTACTGTTGGAAGACAATTACCGCTCTGCAGGTTCTA TCTTGAATGCAGCCCAAGAAGTGATTGAGCAGGATACGAGCCGGCCTGCAAAGGCATTGCTAGCTACGCACTCCT TCGGAACCTTGCCCGTGCTAAGAAGACTCCCAAATCCCAACGCAGAGGCGCAGTGGATGGTACTTGAGATCAAGC GATGTGCAGCGATGACCGGCGGTCTACTGCGCATGTCTGACTTTGCTGTCCTGCTTCGGTCGGCTTCGCTGTCTA CACAAATCGAAACAGCTTTTGGAAGGGCGGGTATACCGTACAAGATGGTTGGAGGCAGAAAATTCTTTGACCGAA CTGAAGTCAAGATTCTTCTCAATTATATGAGGGTGGTGAGCCATACGGGACATTCGGACGCGTTGATGAATATTG TGAATGTTCCGCCACGAAGAATTGGCGATGAGACAATCAAGCAATTGACTAGCGGTGCGGAGAAGGCCAAAATTC CTCTATGGGACTTCATCAAGGATGTCATCCAAGGGCGTCGTTCGACTGAGAAGAAACTACAAAAAGCTGCAGAGC AGGGACTCTGCGTTCTAATCAATTTGATTGAAGCCTCTAGACAGAAGTTGCAAGAGTGCGAGGATGCATCCGCTC CACGTGTTCTGATTGAGTTCATTGCCGAACGCCTCTCATTCCAAGAATATCTCATCAGAGCATATCCCCTAGACG AAGACAGTCGCTGGGCGAATGTTAAAGAATTGATGCATCAAGCCAGTGAAGTCGCAGCATTCGAGGAGGAGGTTG ATAAAGAAATGGATCTCCCTGAAATCGAAGGTGTGCAACAACAGCAGGCACATCCTGGCGAGGAGGCTCTCACTC GGTTCCTGGCGAATGTCGCCTTGGCTACGGAGATTACAACCAAAGAAGAAGCCAAAGAGGGAAACCAACCGCAAG AGAAAGTCACGATTTCAACTATCCACGCTGCTAAGGGCCTGGAGTGGCCAGTCGTATTTGTTCCTGCAGTGTACA ACGGGAGCATTCCTCACTCGCGTGCTGAGGTAATAGAAGAAGAGAGACGATTGCTGTATGTCGCGATGACAAGAG CGCAGGCCCTGTTATACCTGAGTGTTCCTATTCGACAACCGCGGTTAGGAGAAGGAGAAGCTGGTGCCACCACTT TGACGCCATTCCTTCCTCCCAAATTGACCAAATCGCGCTTCCGGTCAACGGGGCCGTCTCTCCATGAGAAGGTGG TGTATGCAATTGCCGATATTCTGCGTCGCCCGCGGCCATCTTTAGACGACATTTACAAGGGGCTCGAGTTTCTTC CATCGACGCTGGACGACCGATGGACACCCGAGGGCGAGGAGGACCGCAGCAAATTCGATGGCACATCTACCTCTC ACGACGCGTCTGGCGAGCCCAATCCAAAGCGTCGGCGGGCAGACATGAACCAGGGTCCAAAATCGACCACCTACA TCTCATCGACCGGGTATACCATGAACAACTCGACAGGGTTTACGATTCCTCCAACTGGTCTATCGGGTTTTACGT CTGCCCGGGATTACATAGCGGCCAACCCCGAACCCCCCGCGGAGTCAGCCTCAAAGGCTGATGCAGATGCAGATG CAGCTGGGACAAACAGACCGAAACCGCTCAGCAGCGCAAGCCGTAAAGACGGACTCACACAGGCAAGCATATCCA ACTTTTTTGCAGGCCCAGGATCCTCCCAGAAGAGAGAACCAGTTCTGCCTCGCTATCCACAGCCACCATCGCAGA ACCAACGCTCAGGAGCAAGAAGCATTGTCCCATCTACCCTCTCCTCTCACCGTGTTCAGCCACGACCACTTATTC CAACAAGGCCGACCCTGGAGCCCACGGACCCGAATGGTTACACGTGGCTGGCAACTCCATCCAAACCAACAACCC TGAAAGCTGCCAGGATGTCGAAGACGCAGGAACAGAACGGCAATAGTACATCCGCAGGCGGAACAGCCGGGGCAG ACGAGGTGAAACCCGAGAGCTCCACCGGGTTCCAGCCGGTGTCGACGTTTCACAGCACGACGATGTCAATGATCC AACAAGCACCGCGACGGACGTTGGGAATTCGGCGGAGCATGAACGGGTGGCAAGACCGGATGAAGCGCGAGGGCG GTGGACAGGCGAGCTGA |