Protein ID | Pro_DTO377G3_2|g5116.t1 |
Gene name | |
Location | scaffold_11:618626..620001 |
Strand | + |
Gene length (bp) | 1375 |
Transcript length (bp) | 1311 |
Coding sequence length (bp) | 1311 |
Protein length (aa) | 437 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00134 | Cyclin_N | Cyclin, N-terminal domain | 8.1E-36 | 62 | 189 |
PF02984 | Cyclin_C | Cyclin, C-terminal domain | 8.3E-13 | 192 | 297 |
Orthofinder run ID | 2 |
Orthogroup | 2420 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5116.t1 MDYHRNYRPCPTFFVEEEYGMESRIRQERQAKQEHAKQMARERQYVMADELSNLTSEQLRDDVLSHMLEMDNQTL PDVESIDIQTEIQWFMRPYLLDFLIEAHTAFQLLPSTLFLAINLLDRYCSKRVVYKRHYQLVGCAALLIAAKYND KKDRVPTIKELKSMCCSLYDDDMFTQMEWHVLQTLGWSIGHPTVDAFLQHAVLDDAYDPEVEHMALYILEIALFH RDFVAKLSSELARAALALSRCILNRPQPRHTHWSSQYDSMTLVALSQQLHQPSTVVARKYASAHYSRVSKVMEHF LNRQASLATYARCTPPVETPIESKPYNGEIGLATPQKSQQLTAIPHGYLTPPITPDNEALVHAHAQMANHDMSRG MATGHHGCSPSPAPSAEMQYMNSEAYQQQQEAMYMAQQAALQQFPLAPTHMGMCQTYQGGM* |
Coding | >Pro_DTO377G3_2|g5116.t1 ATGGATTACCATCGCAACTACCGTCCTTGTCCCACGTTCTTCGTGGAAGAAGAGTACGGCATGGAAAGTCGCATT CGGCAAGAACGGCAAGCGAAACAGGAGCATGCCAAGCAGATGGCTCGTGAGCGTCAATACGTCATGGCGGATGAG CTATCTAATCTCACAAGCGAGCAGCTTCGGGACGATGTCCTGAGTCACATGTTGGAAATGGATAACCAAACCCTG CCCGACGTCGAGTCCATTGACATCCAAACCGAGATCCAGTGGTTTATGCGACCGTACCTTCTTGACTTCTTGATC GAGGCCCACACTGCGTTCCAGCTCCTCCCATCCACCTTGTTCTTGGCAATCAATCTTTTAGACCGATACTGCTCC AAGCGTGTGGTCTACAAGCGTCACTACCAGTTGGTCGGCTGTGCAGCTCTACTCATCGCGGCCAAGTACAATGAC AAGAAGGATCGCGTCCCCACTATCAAGGAGTTGAAGTCGATGTGCTGCTCTCTTTACGACGACGATATGTTCACC CAGATGGAATGGCATGTCCTCCAAACTCTTGGCTGGTCCATTGGACACCCAACTGTGGATGCTTTCTTGCAGCAC GCCGTCTTGGATGATGCTTACGACCCCGAGGTGGAACACATGGCTCTGTACATCCTGGAGATTGCCTTGTTCCAC CGGGACTTTGTCGCCAAGCTATCGTCTGAGCTTGCCCGTGCCGCTCTTGCATTGTCACGTTGCATTCTTAACCGG CCTCAGCCCCGTCATACCCATTGGTCATCGCAGTATGACTCGATGACTCTCGTTGCCTTGTCTCAACAGTTGCAC CAGCCCTCCACCGTGGTCGCCCGCAAGTACGCTTCCGCTCACTACTCTCGGGTCTCCAAGGTCATGGAACACTTC CTCAACCGCCAGGCTTCGTTGGCAACCTACGCCCGTTGCACCCCTCCGGTCGAGACTCCTATCGAGTCCAAGCCG TACAATGGGGAGATTGGTCTTGCCACCCCTCAGAAGTCCCAGCAGTTGACAGCTATTCCTCACGGTTACCTCACT CCTCCCATCACCCCGGACAACGAGGCGCTTGTGCATGCCCATGCACAAATGGCGAATCACGATATGAGCCGCGGA ATGGCCACTGGTCACCATGGCTGTTCCCCTTCCCCCGCACCATCCGCTGAGATGCAATACATGAACAGTGAAGCA TACCAGCAACAGCAGGAGGCTATGTACATGGCGCAGCAAGCAGCACTCCAACAGTTCCCTCTGGCACCTACCCAT ATGGGAATGTGCCAGACATATCAGGGTGGGATGTAA |
Transcript | >Pro_DTO377G3_2|g5116.t1 ATGGATTACCATCGCAACTACCGTCCTTGTCCCACGTTCTTCGTGGAAGAAGAGTACGGCATGGAAAGTCGCATT CGGCAAGAACGGCAAGCGAAACAGGAGCATGCCAAGCAGATGGCTCGTGAGCGTCAATACGTCATGGCGGATGAG CTATCTAATCTCACAAGCGAGCAGCTTCGGGACGATGTCCTGAGTCACATGTTGGAAATGGATAACCAAACCCTG CCCGACGTCGAGTCCATTGACATCCAAACCGAGATCCAGTGGTTTATGCGACCGTACCTTCTTGACTTCTTGATC GAGGCCCACACTGCGTTCCAGCTCCTCCCATCCACCTTGTTCTTGGCAATCAATCTTTTAGACCGATACTGCTCC AAGCGTGTGGTCTACAAGCGTCACTACCAGTTGGTCGGCTGTGCAGCTCTACTCATCGCGGCCAAGTACAATGAC AAGAAGGATCGCGTCCCCACTATCAAGGAGTTGAAGTCGATGTGCTGCTCTCTTTACGACGACGATATGTTCACC CAGATGGAATGGCATGTCCTCCAAACTCTTGGCTGGTCCATTGGACACCCAACTGTGGATGCTTTCTTGCAGCAC GCCGTCTTGGATGATGCTTACGACCCCGAGGTGGAACACATGGCTCTGTACATCCTGGAGATTGCCTTGTTCCAC CGGGACTTTGTCGCCAAGCTATCGTCTGAGCTTGCCCGTGCCGCTCTTGCATTGTCACGTTGCATTCTTAACCGG CCTCAGCCCCGTCATACCCATTGGTCATCGCAGTATGACTCGATGACTCTCGTTGCCTTGTCTCAACAGTTGCAC CAGCCCTCCACCGTGGTCGCCCGCAAGTACGCTTCCGCTCACTACTCTCGGGTCTCCAAGGTCATGGAACACTTC CTCAACCGCCAGGCTTCGTTGGCAACCTACGCCCGTTGCACCCCTCCGGTCGAGACTCCTATCGAGTCCAAGCCG TACAATGGGGAGATTGGTCTTGCCACCCCTCAGAAGTCCCAGCAGTTGACAGCTATTCCTCACGGTTACCTCACT CCTCCCATCACCCCGGACAACGAGGCGCTTGTGCATGCCCATGCACAAATGGCGAATCACGATATGAGCCGCGGA ATGGCCACTGGTCACCATGGCTGTTCCCCTTCCCCCGCACCATCCGCTGAGATGCAATACATGAACAGTGAAGCA TACCAGCAACAGCAGGAGGCTATGTACATGGCGCAGCAAGCAGCACTCCAACAGTTCCCTCTGGCACCTACCCAT ATGGGAATGTGCCAGACATATCAGGGTGGGATGTAA |
Gene | >Pro_DTO377G3_2|g5116.t1 ATGGATTACCATCGCAACTACCGTCCTTGTCCCACGTTCTTCGTGGAAGAAGAGTACGGCATGGAAAGTCGCATT CGGCAAGAACGGCAAGCGAAACAGGAGCATGCCAAGCAGATGGCTCGTGAGCGTCAATACGTCATGGCGGATGAG CTATCTAATCTCACAAGCGAGCAGCTTCGGGACGATGTCCTGAGTCACATGTTGGAAATGGATGTGAGTGACCAG ACCCTTGGTTTCTCTCCAAGGCTATACGTTGTTAACCTAGTCTCCGCCATAGAACCAAACCCTGCCCGACGTCGA GTCCATTGACATCCAAACCGAGATCCAGTGGTTTATGCGACCGTACCTTCTTGACTTCTTGATCGAGGCCCACAC TGCGTTCCAGCTCCTCCCATCCACCTTGTTCTTGGCAATCAATCTTTTAGACCGATACTGCTCCAAGCGTGTGGT CTACAAGCGTCACTACCAGTTGGTCGGCTGTGCAGCTCTACTCATCGCGGCCAAGTACAATGACAAGAAGGATCG CGTCCCCACTATCAAGGAGTTGAAGTCGATGTGCTGCTCTCTTTACGACGACGATATGTTCACCCAGATGGAATG GCATGTCCTCCAAACTCTTGGCTGGTCCATTGGACACCCAACTGTGGATGCTTTCTTGCAGCACGCCGTCTTGGA TGATGCTTACGACCCCGAGGTGGAACACATGGCTCTGTACATCCTGGAGATTGCCTTGTTCCACCGGGACTTTGT CGCCAAGCTATCGTCTGAGCTTGCCCGTGCCGCTCTTGCATTGTCACGTTGCATTCTTAACCGGCCTCAGCCCCG TCATACCCATTGGTCATCGCAGTATGACTCGATGACTCTCGTTGCCTTGTCTCAACAGTTGCACCAGCCCTCCAC CGTGGTCGCCCGCAAGTACGCTTCCGCTCACTACTCTCGGGTCTCCAAGGTCATGGAACACTTCCTCAACCGCCA GGCTTCGTTGGCAACCTACGCCCGTTGCACCCCTCCGGTCGAGACTCCTATCGAGTCCAAGCCGTACAATGGGGA GATTGGTCTTGCCACCCCTCAGAAGTCCCAGCAGTTGACAGCTATTCCTCACGGTTACCTCACTCCTCCCATCAC CCCGGACAACGAGGCGCTTGTGCATGCCCATGCACAAATGGCGAATCACGATATGAGCCGCGGAATGGCCACTGG TCACCATGGCTGTTCCCCTTCCCCCGCACCATCCGCTGAGATGCAATACATGAACAGTGAAGCATACCAGCAACA GCAGGAGGCTATGTACATGGCGCAGCAAGCAGCACTCCAACAGTTCCCTCTGGCACCTACCCATATGGGAATGTG CCAGACATATCAGGGTGGGATGTAA |