Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g5081.t1
Gene name
Location	scaffold_11:523337..524089
Strand	-
Gene length (bp)	752
Transcript length (bp)	666
Coding sequence length (bp)	666
Protein length (aa)	222

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08229	SHR3_chaperone	ER membrane protein SH3	7.4E-79	6	199

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	61	83	22
3	90	112	22
4	146	164	18

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g5081.t1 MAFKSGSFATFMIVCPTCFFLGIIFSLFPYDYPILWSTVLTPTAHYDYLEAHLRFLHASPPLIPRILHIVIFVGL AGLLTKLYKPSESNMLFDGASLVLYMCGVTVYIANIVKGLRLASAGRYGAELATSTDENEQILGREDSLKVLSAS NTILALVLVGILVLQAGQWYAERKDAQEDESFATSKKTEKESGEATATTSGASTAIAGKSGRQGSQRKKSN*
Coding	>Pro_DTO377G3_2\|g5081.t1 ATGGCCTTCAAAAGCGGCTCGTTCGCGACTTTCATGATTGTCTGCCCGACCTGTTTCTTCTTGGGCATTATCTTC TCCCTCTTCCCTTACGACTACCCGATCTTGTGGTCCACAGTGTTGACACCTACCGCACACTATGACTACCTCGAA GCGCATCTCCGCTTCCTGCACGCCTCGCCCCCGCTCATCCCACGCATCCTGCACATCGTAATTTTCGTCGGCCTA GCCGGCCTCCTCACGAAGCTCTACAAGCCCTCCGAATCAAACATGCTCTTCGACGGCGCCTCGCTGGTTCTCTAC ATGTGCGGCGTGACAGTCTACATCGCCAACATCGTCAAGGGTCTGCGCCTCGCCTCTGCCGGCCGGTACGGCGCC GAGCTGGCTACCTCCACCGACGAGAATGAGCAGATCCTTGGTCGCGAGGACTCGCTCAAGGTTCTTTCCGCTAGC AATACTATTCTGGCCCTCGTCCTCGTTGGCATCCTGGTCCTGCAGGCTGGGCAGTGGTACGCGGAGCGCAAGGAT GCGCAGGAAGATGAATCGTTTGCTACTAGCAAGAAGACTGAGAAGGAGTCTGGCGAGGCGACGGCTACTACTTCC GGTGCGTCGACTGCGATTGCTGGGAAGTCTGGTCGGCAGGGAAGCCAGCGTAAGAAGAGCAATTAA
Transcript	>Pro_DTO377G3_2\|g5081.t1 ATGGCCTTCAAAAGCGGCTCGTTCGCGACTTTCATGATTGTCTGCCCGACCTGTTTCTTCTTGGGCATTATCTTC TCCCTCTTCCCTTACGACTACCCGATCTTGTGGTCCACAGTGTTGACACCTACCGCACACTATGACTACCTCGAA GCGCATCTCCGCTTCCTGCACGCCTCGCCCCCGCTCATCCCACGCATCCTGCACATCGTAATTTTCGTCGGCCTA GCCGGCCTCCTCACGAAGCTCTACAAGCCCTCCGAATCAAACATGCTCTTCGACGGCGCCTCGCTGGTTCTCTAC ATGTGCGGCGTGACAGTCTACATCGCCAACATCGTCAAGGGTCTGCGCCTCGCCTCTGCCGGCCGGTACGGCGCC GAGCTGGCTACCTCCACCGACGAGAATGAGCAGATCCTTGGTCGCGAGGACTCGCTCAAGGTTCTTTCCGCTAGC AATACTATTCTGGCCCTCGTCCTCGTTGGCATCCTGGTCCTGCAGGCTGGGCAGTGGTACGCGGAGCGCAAGGAT GCGCAGGAAGATGAATCGTTTGCTACTAGCAAGAAGACTGAGAAGGAGTCTGGCGAGGCGACGGCTACTACTTCC GGTGCGTCGACTGCGATTGCTGGGAAGTCTGGTCGGCAGGGAAGCCAGCGTAAGAAGAGCAATTAA
Gene	>Pro_DTO377G3_2\|g5081.t1 ATGGCCTTCAAAAGCGGCTCGTTCGCGACTTTCATGATTGTCTGCCGTAAGTCCATCGCATCGCGAGTCCCCGGA CTCCAACGGCAAAGAGGCCACGAGACTGTAATAAACTAACTCAGTCTGCCCAACCAGCGACCTGTTTCTTCTTGG GCATTATCTTCTCCCTCTTCCCTTACGACTACCCGATCTTGTGGTCCACAGTGTTGACACCTACCGCACACTATG ACTACCTCGAAGCGCATCTCCGCTTCCTGCACGCCTCGCCCCCGCTCATCCCACGCATCCTGCACATCGTAATTT TCGTCGGCCTAGCCGGCCTCCTCACGAAGCTCTACAAGCCCTCCGAATCAAACATGCTCTTCGACGGCGCCTCGC TGGTTCTCTACATGTGCGGCGTGACAGTCTACATCGCCAACATCGTCAAGGGTCTGCGCCTCGCCTCTGCCGGCC GGTACGGCGCCGAGCTGGCTACCTCCACCGACGAGAATGAGCAGATCCTTGGTCGCGAGGACTCGCTCAAGGTTC TTTCCGCTAGCAATACTATTCTGGCCCTCGTCCTCGTTGGCATCCTGGTCCTGCAGGCTGGGCAGTGGTACGCGG AGCGCAAGGATGCGCAGGAAGATGAATCGTTTGCTACTAGCAAGAAGACTGAGAAGGAGTCTGGCGAGGCGACGG CTACTACTTCCGGTGCGTCGACTGCGATTGCTGGGAAGTCTGGTCGGCAGGGAAGCCAGCGTAAGAAGAGCAATT AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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