© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g5075.t1 |
| Gene name | |
| Location | scaffold_11:498958..500764 |
| Strand | - |
| Gene length (bp) | 1806 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.1E-132 | 25 | 491 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-18 | 30 | 312 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 72 | 94 | 22 |
| 3 | 99 | 116 | 17 |
| 4 | 126 | 148 | 22 |
| 5 | 160 | 182 | 22 |
| 6 | 192 | 214 | 22 |
| 7 | 286 | 308 | 22 |
| 8 | 323 | 345 | 22 |
| 9 | 352 | 374 | 22 |
| 10 | 384 | 403 | 19 |
| 11 | 454 | 476 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5075.t1 MGILTLAEDRPTPKSVYNWRVYALAVIASCGSNMIGYTSAFIGTTITLSSFMKEFGLDEMSSTQRSLISENIVSL FIAGAFFGALGTYALGHFIGRKWSLAVAATVFFLGAGLQLGANSARGLGILYAGRVLSGLGTGVASNIIPIYLSE LAPPAIRGRLVGLYELGWQIGGMLGFWINYGVEQHMPEVHEQWIIPFAIQLVPSGLLFIGALWIKESPRWLFLKD RRREAMKNLCWIRQLEADDMYITEEVAAIDQALEHQKTSIGIGFWKPFQALATNKSVMYRLMLGCMLFFWQNGSG INAINYYSPTIFKSIGVDPNTVNLMTGIFGVIKAVMTFVWLLFLVDQFGRRNLLLVGAVTGSICMWVIGAYICVV KPEDNVATSLNGGGIAAIFFFYLWTAVYTPTWNGTPWVINSEFFDPNFRSLAQAATTASNWLFNFLVSRFTEQMF ATMHYGVYFFFASLSFLAFFFAFFLIPETSGVPLEKVDRLFDCKPVWRANKILKAALAEEEEQFRYEVKEASYHE ENTGSIAPTP* |
| Coding | >Pro_DTO377G3_2|g5075.t1 ATGGGCATTCTCACACTTGCTGAGGATCGGCCAACGCCCAAGTCCGTTTACAACTGGCGTGTATATGCACTCGCC GTCATTGCATCATGTGGTTCCAACATGATCGGCTATACCAGTGCCTTCATCGGTACAACTATCACACTCTCCTCC TTCATGAAGGAATTCGGCCTCGACGAGATGTCTTCCACACAAAGGAGTCTGATTAGCGAGAACATCGTCTCACTT TTCATTGCTGGTGCCTTTTTCGGTGCCCTGGGAACATATGCCCTAGGCCACTTCATCGGCCGAAAATGGAGTTTG GCTGTTGCTGCCACGGTATTCTTTCTCGGAGCTGGACTACAACTCGGTGCTAACAGTGCCCGGGGGCTGGGTATC CTCTACGCTGGTCGTGTGCTGTCCGGTTTGGGTACCGGTGTAGCCTCGAATATCATTCCCATATATCTTTCCGAA CTAGCGCCCCCTGCAATCCGAGGACGGCTCGTCGGTCTATATGAGCTTGGCTGGCAGATAGGCGGAATGTTAGGG TTTTGGATTAATTATGGTGTTGAGCAACACATGCCTGAAGTCCACGAGCAATGGATCATTCCCTTTGCTATCCAG CTCGTCCCCTCCGGTCTGCTTTTCATAGGTGCCTTGTGGATCAAAGAATCTCCTCGTTGGCTGTTTCTCAAGGAC CGTCGCCGCGAAGCGATGAAAAATCTTTGCTGGATCCGCCAATTGGAGGCCGATGACATGTACATCACCGAAGAG GTAGCTGCGATCGATCAGGCTCTTGAGCATCAGAAGACTTCCATCGGTATTGGCTTCTGGAAGCCCTTCCAGGCT CTCGCTACTAACAAGAGCGTCATGTACCGTCTTATGCTGGGCTGCATGCTCTTCTTCTGGCAAAACGGCTCCGGG ATCAATGCCATCAACTATTACTCCCCTACCATTTTCAAATCGATCGGTGTCGACCCGAATACCGTTAACCTGATG ACCGGTATCTTCGGTGTCATTAAGGCGGTTATGACCTTCGTGTGGCTCCTGTTCCTGGTCGACCAATTCGGAAGG CGCAATCTGCTCCTTGTTGGTGCTGTGACTGGATCGATCTGTATGTGGGTCATCGGTGCCTATATCTGTGTTGTC AAGCCCGAAGATAATGTCGCCACGTCTCTGAACGGCGGAGGCATTGCGGCCATATTCTTCTTCTACCTGTGGACT GCGGTTTACACCCCTACCTGGAATGGTACCCCTTGGGTTATCAATTCCGAATTCTTCGACCCCAACTTCCGTTCC CTGGCTCAGGCTGCCACGACTGCGAGCAACTGGCTCTTTAATTTCCTCGTCTCTCGCTTCACCGAACAGATGTTC GCCACGATGCACTACGGCGTGTACTTCTTCTTCGCTTCACTGTCATTCCTGGCATTCTTCTTCGCGTTTTTCCTC ATCCCTGAGACCAGTGGTGTTCCTCTTGAGAAGGTCGACCGCCTGTTCGATTGCAAGCCCGTCTGGAGAGCGAAC AAGATACTCAAGGCCGCCCTTGCGGAAGAGGAGGAGCAGTTCCGCTACGAGGTCAAGGAGGCATCGTACCATGAG GAAAACACTGGTTCGATAGCTCCTACGCCTTGA |
| Transcript | >Pro_DTO377G3_2|g5075.t1 ATGGGCATTCTCACACTTGCTGAGGATCGGCCAACGCCCAAGTCCGTTTACAACTGGCGTGTATATGCACTCGCC GTCATTGCATCATGTGGTTCCAACATGATCGGCTATACCAGTGCCTTCATCGGTACAACTATCACACTCTCCTCC TTCATGAAGGAATTCGGCCTCGACGAGATGTCTTCCACACAAAGGAGTCTGATTAGCGAGAACATCGTCTCACTT TTCATTGCTGGTGCCTTTTTCGGTGCCCTGGGAACATATGCCCTAGGCCACTTCATCGGCCGAAAATGGAGTTTG GCTGTTGCTGCCACGGTATTCTTTCTCGGAGCTGGACTACAACTCGGTGCTAACAGTGCCCGGGGGCTGGGTATC CTCTACGCTGGTCGTGTGCTGTCCGGTTTGGGTACCGGTGTAGCCTCGAATATCATTCCCATATATCTTTCCGAA CTAGCGCCCCCTGCAATCCGAGGACGGCTCGTCGGTCTATATGAGCTTGGCTGGCAGATAGGCGGAATGTTAGGG TTTTGGATTAATTATGGTGTTGAGCAACACATGCCTGAAGTCCACGAGCAATGGATCATTCCCTTTGCTATCCAG CTCGTCCCCTCCGGTCTGCTTTTCATAGGTGCCTTGTGGATCAAAGAATCTCCTCGTTGGCTGTTTCTCAAGGAC CGTCGCCGCGAAGCGATGAAAAATCTTTGCTGGATCCGCCAATTGGAGGCCGATGACATGTACATCACCGAAGAG GTAGCTGCGATCGATCAGGCTCTTGAGCATCAGAAGACTTCCATCGGTATTGGCTTCTGGAAGCCCTTCCAGGCT CTCGCTACTAACAAGAGCGTCATGTACCGTCTTATGCTGGGCTGCATGCTCTTCTTCTGGCAAAACGGCTCCGGG ATCAATGCCATCAACTATTACTCCCCTACCATTTTCAAATCGATCGGTGTCGACCCGAATACCGTTAACCTGATG ACCGGTATCTTCGGTGTCATTAAGGCGGTTATGACCTTCGTGTGGCTCCTGTTCCTGGTCGACCAATTCGGAAGG CGCAATCTGCTCCTTGTTGGTGCTGTGACTGGATCGATCTGTATGTGGGTCATCGGTGCCTATATCTGTGTTGTC AAGCCCGAAGATAATGTCGCCACGTCTCTGAACGGCGGAGGCATTGCGGCCATATTCTTCTTCTACCTGTGGACT GCGGTTTACACCCCTACCTGGAATGGTACCCCTTGGGTTATCAATTCCGAATTCTTCGACCCCAACTTCCGTTCC CTGGCTCAGGCTGCCACGACTGCGAGCAACTGGCTCTTTAATTTCCTCGTCTCTCGCTTCACCGAACAGATGTTC GCCACGATGCACTACGGCGTGTACTTCTTCTTCGCTTCACTGTCATTCCTGGCATTCTTCTTCGCGTTTTTCCTC ATCCCTGAGACCAGTGGTGTTCCTCTTGAGAAGGTCGACCGCCTGTTCGATTGCAAGCCCGTCTGGAGAGCGAAC AAGATACTCAAGGCCGCCCTTGCGGAAGAGGAGGAGCAGTTCCGCTACGAGGTCAAGGAGGCATCGTACCATGAG GAAAACACTGGTTCGATAGCTCCTACGCCTTGA |
| Gene | >Pro_DTO377G3_2|g5075.t1 ATGGGCATTCTCACACTTGCTGAGGATCGGCCAACGCCCAAGTCCGTTTACAACTGGCGTGTATATGCACTCGCC GTCATTGCATCATGTGGTTCCAACATGATCGGCTATACCAGTGCCTTCATCGGTACAACTATCACACTCTCCTCC TTCATGAAGGAATTCGGCCTCGACGAGATGTCTTCCACACAAAGGAGTCTGATTAGCGAGAACATCGTCTCACTT TTCATTGCTGGTGCCTTTTTCGGTGCCCTGGGAACATATGCCCTAGGCCACTTCATCGGCCGAAAATGGAGTTTG GCTGTTGCTGCCACGGTATTCTTTCTCGGAGCTGGACTACAACTCGGTGCTAACAGTGCCCGGGGGCTGGGTATC CTCTACGCTGGTCGTGTGCTGTCCGGTTTGGGTACCGGTGTAGCCTCGAATATCATTCCCATATATCTTTCCGAA CTAGCGCCCCCTGCAATCCGAGGACGGCTCGTCGGTCTATATGAGCTTGGCTGGCAGATAGGCGGAATGTTAGGG TTTTGGATTAATGTGAGTCTCCCTGTCTCTCGTTGATCTTTTTTTTCCCCGTGTTATCTTTGCATTCAAAGCTAA CCTAGATATGGTAGTATGGTGTTGAGCAACACATGCCTGAAGTCCACGAGCAATGGATCATTCCCTTTGCTATCC AGCTCGTCCCCTCCGGTCTGCTTTTCATAGGTGCCTTGTGGATCAAAGAATCTCCTCGTTGGCTGTTTCTCAAGG ACCGTCGCCGCGAAGCGATGAAAAATCTTTGCTGGATCCGCCAATTGGAGGCCGATGACATGTACATCACCGAAG AGGTAGCTGCGATCGATCAGGCTCTTGAGCATCAGAAGACTTCCATCGGTATTGGCTTCTGGAAGCCCTTCCAGG CTCTCGCTACTAACAAGAGCGTCATGTACCGTCTTATGCTGGGCTGCATGCTCTTCTTCTGGCAAAACGGCTCCG GGATCAATGCCATCAACTATTACTCCCCTACCATTTTCAAATCGGTATGATTGCGCCTCATCAGATGCATTTCCG ATAATCAATTACTTATGCTAACTCATGTTTCTTAGATCGGTGTCGACCCGAATACCGTTAACCTGATGACCGGTA TCTTCGGTGTCATTAAGGCGGTTATGACCTTCGTGTGGCTCCTGTTCCTGGTCGACCAATTCGGAAGGCGCAATC TGCTCCTTGTTGGTGCTGTGACTGGATCGATCTGTATGTGGGTCATCGGTGCCTATATCTGTGTTGTCAAGCCCG AAGATAATGTCGCCACGTCTCTGAACGGCGGAGGCATTGCGGCCATATTCTTCTTCTACCTGTGGACTGCGGTTT ACACCCCTACCTGGAATGGTACCCCTTGGGTTATCAATTCCGTAAGTCGCTGCTTATTACCATTCTCAATTGAAC ATTTTCCTGACCATTTATTAGGAATTCTTCGACCCCAACTTCCGTTCCCTGGCTCAGGCTGCCACGACTGCGAGC AACTGGCTCTTTAATTTCCTCGTCTCTCGCTTCACCGAACAGATGTTCGCCACGATGCACTACGGCGTGTACTTC TTCTTCGCTTCACTGTCATTCCTGGCATTCTTCTTCGCGTTTTTCCTCATCCCTGAGACCAGTGGTGTTCCTCTT GAGAAGGTCGACCGCCTGTTCGATTGCAAGCCCGTCTGGAGAGCGAACAAGATACTCAAGGCCGCCCTTGCGGAA GAGGAGGAGCAGTTCCGCTACGAGGTCAAGGAGGCATCGTACCATGAGGAAAACACTGGTTCGATAGCTCCTACG CCTTGA |