Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5052.t1
Gene name
Locationscaffold_11:428096..429078
Strand+
Gene length (bp)982
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 4.4E-09 101 141
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 8.0E-06 102 141

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5052.t1
MSSPPTSKRLKTSTTSAPPHMLSQQQIHPFHRVPTFEGIPIPTASLSQQNPGASRKRPPSPTGSSAMMTGQGNPS
GGVIDDSGAIPTVESTPKKKGRTNTPWTAEEEQRLKTMRDAGRSWSEIAKTFPTRTEGSVKKHWYKDMHYAEFAE
DESVKLREAIKEYEANKWKVIGQKVGKPAKACEQYAKEHFKNV*
Coding >Pro_DTO377G3_2|g5052.t1
ATGTCTTCCCCCCCGACATCTAAACGCCTCAAGACGTCAACAACCAGCGCCCCCCCGCATATGCTTTCGCAACAA
CAGATCCATCCATTCCACCGCGTCCCAACCTTTGAAGGCATCCCGATTCCGACTGCTTCTCTATCCCAACAAAAC
CCCGGCGCTTCGCGCAAACGTCCTCCTTCTCCCACGGGATCGTCAGCCATGATGACAGGCCAAGGGAACCCTTCG
GGTGGTGTGATTGATGACTCCGGTGCCATTCCCACGGTTGAGTCTACGCCTAAGAAGAAGGGACGCACCAATACC
CCATGGACCGCAGAGGAGGAGCAAAGGCTGAAGACAATGCGCGACGCCGGGCGCAGTTGGAGTGAAATTGCCAAG
ACTTTCCCGACCCGAACCGAGGGCAGTGTCAAGAAGCATTGGTATAAGGACATGCACTACGCGGAATTTGCCGAA
GATGAGTCTGTGAAGCTTCGGGAGGCGATCAAGGAGTACGAGGCGAACAAGTGGAAGGTGATCGGCCAGAAAGTG
GGCAAGCCTGCCAAAGCTTGCGAACAGTATGCCAAAGAGCATTTCAAGAACGTCTGA
Transcript >Pro_DTO377G3_2|g5052.t1
ATGTCTTCCCCCCCGACATCTAAACGCCTCAAGACGTCAACAACCAGCGCCCCCCCGCATATGCTTTCGCAACAA
CAGATCCATCCATTCCACCGCGTCCCAACCTTTGAAGGCATCCCGATTCCGACTGCTTCTCTATCCCAACAAAAC
CCCGGCGCTTCGCGCAAACGTCCTCCTTCTCCCACGGGATCGTCAGCCATGATGACAGGCCAAGGGAACCCTTCG
GGTGGTGTGATTGATGACTCCGGTGCCATTCCCACGGTTGAGTCTACGCCTAAGAAGAAGGGACGCACCAATACC
CCATGGACCGCAGAGGAGGAGCAAAGGCTGAAGACAATGCGCGACGCCGGGCGCAGTTGGAGTGAAATTGCCAAG
ACTTTCCCGACCCGAACCGAGGGCAGTGTCAAGAAGCATTGGTATAAGGACATGCACTACGCGGAATTTGCCGAA
GATGAGTCTGTGAAGCTTCGGGAGGCGATCAAGGAGTACGAGGCGAACAAGTGGAAGGTGATCGGCCAGAAAGTG
GGCAAGCCTGCCAAAGCTTGCGAACAGTATGCCAAAGAGCATTTCAAGAACGTCTGA
Gene >Pro_DTO377G3_2|g5052.t1
ATGTCGTAAGTCCCTTCGTCTGTGATCTCCGTCCGGCCTCCAGCTGTAGGAGGGAGACTGGGTTGGAACTCAAGT
GCACTTGGTCGCGTTCTTATTATATTGCCTTACCTCATCTTATGTTTCTACTATTCATTAACTTGTTGCCCGATT
AGTTCCCCCCCGACATCTAAACGCCTCAAGACGTCAACAACCAGCGCCCCCCCGCATATGCTTTCGCAACAACAG
ATCCATCCATTCCACCGCGTCCCAACCTTTGAAGGCATCCCGATTCCGACTGCTTCTCTATCCCAACAAAACCCC
GGCGCTTCGCGCAAACGTCCTCCTTCTCCCACGGGATCGTCAGCCATGATGACAGGCCAAGGGAACCCTTCGGGT
GGTGTGATTGATGACTCCGGTGCCATTCCCACGGTTGAGTCTACGCCTAAGAAGAAGGGACGCACCAATACCCCA
TGGACCGCAGAGGAGGAGCAAAGGCTGAAGACAATGCGCGACGCCGGGCGCAGTTGGAGTGAAATTGCCAAGGTG
CGCGCGCGGCTTTTTATAGGCTGAAACTATGGGTTGCTGACCTGGGCCTTTTTTTTCTTACCCGTCGCAGACTTT
CCCGACCCGAACCGAGGGCAGTGTCAAGAAGCATTGGTATAAGGTACGCAATATTAAGCGATTTGGGTAATACCA
CGTCTCGTCTTACTGACACCTTGCGCAGGACATGCACTACGCGGAATTTGCCGAAGATGAGGTATGATCCCGAGT
CCTTTTAATGTCCGTTGTCGCATCCGTTCCTGACGTCGCACAGTCTGTGAAGCTTCGGGAGGCGATCAAGGAGTA
CGAGGCGAACAAGTGGAAGGTGATCGGCCAGAAAGTGGGCAAGCCTGCCAAAGTAAGCACCGGAATCTCCTGCAT
GTCATTGTGCATCGCATCTAATCTCGATATTCTCCGACAGGCTTGCGAACAGTATGCCAAAGAGCATTTCAAGAA
CGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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