Protein ID | Pro_DTO377G3_2|g5037.t1 |
Gene name | |
Location | scaffold_11:387266..390527 |
Strand | + |
Gene length (bp) | 3261 |
Transcript length (bp) | 3261 |
Coding sequence length (bp) | 3261 |
Protein length (aa) | 1087 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02891 | zf-MIZ | MIZ/SP-RING zinc finger | 4.2E-09 | 940 | 987 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0046914 | transition metal ion binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Zinc finger, MIZ-type |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5037.t1 MVSPKSRSLASADHIEESNTTASLFLGGVRRHWMGPQANAPENSAARKPRVEVDPPVPPKSLPSETVLMSPVTPG ETLTQPPARGPVDAAKKPDTRPTALPSPVLSTNSHPSPVNADAIISDRPSTLPPISTQLTAQRGDDERMAVQPPP SGLTASQRVTQSSRMGADRPPDSPSLTDTRTGTSTQQHAVSGSRPSPLQNVGAGIAAIPNETWEQWSAQLNALVD DLSAKGALPPAHLSQTTIVRPRINLLQQAINRKDAFYLVIHQLYCRYSTDASTLGQIRVPNAGMKLLRLILDDNA KMHDGATNGFAHFPASPQQLMHTNWYIQVLSGVPEFLARLANEWHGILHQARHPPLVSHLWQSLACPSQILMSVM FTCVARHLHHDKDMDALLKLFWKDLEAFEKCRDSRLPGTTQQALNWKFVQEYRSFPPKYLPQTPQTPSSHSAPPP RPQNRAMPQATPGVPSYPRSSVAGVSQPATNSPAPSPIGAPLQQLPSNSPRGQVVGPAAGPYQSGVNPQMQNTPQ SHYNPIPQGQGPRQEHGWWYPGSPHMNQQQHMYLHTNPHMNPQMQMHIQTSIGQVASSPRHQSLPGSHGQQIPSQ QLHGRTMTPISPANPSLQSSALTPTQSAQLLHAPSSISTTPTTTSHMAQHPMPPQRPNNHHNRQHSTALQSSASP VTRAAQGQHHQPSLNSAFFPVPGYRAPMTVNPNPTRLGLHLVDLRDPMKRLVKQGSDGNDIETDLFTYLKTFVVH PTIVNVDQPIYTWNFSFTHDERQKFPHIAHGKQSQHSVWTFRPGCRTIRLRCIRLPGNPDTVAEKTWCTANTFWP SVFYISVNDKELYVRRKVHNGKDLPLDITEYIKTGENSVRLDMILGQDECKTSKFVFGVEVMEVAEFDQILSLIQ SVPAAESRAAIKKRLAPTTDDDDLAVVTDNLTIDLVDPFMARIFDIPVRSRYCFHHECFDRDTFIRTRNSVSGPT PMVDNWRCPICKGDARPQFLVVDQFLVDVHAQLARTNGLDGIRAIQIKVDGTWTPKYDTDEISPVTDNPFSPKRK AEGSLGPVPVRPRNNVSHGSHSPAVRTQEHTVIELD* |
Coding | >Pro_DTO377G3_2|g5037.t1 ATGGTATCACCTAAATCGCGATCGCTCGCTAGTGCAGATCATATTGAGGAGTCCAACACTACTGCCAGTCTGTTC TTAGGCGGCGTGCGGAGACACTGGATGGGCCCGCAGGCTAACGCCCCGGAGAATTCGGCCGCGCGAAAACCTCGC GTTGAGGTTGATCCTCCAGTCCCTCCCAAATCCCTTCCCAGCGAGACTGTCTTAATGTCCCCCGTCACGCCTGGT GAGACCCTAACCCAACCTCCCGCACGTGGTCCTGTTGATGCGGCAAAAAAGCCCGACACGCGACCGACGGCTCTT CCCTCACCGGTTCTCAGTACAAATTCTCACCCAAGTCCCGTCAACGCCGATGCGATCATCTCAGATAGACCTTCC ACGCTGCCGCCAATCTCTACACAACTCACGGCACAGCGTGGCGATGATGAGCGCATGGCGGTCCAACCTCCTCCG AGCGGGCTCACCGCGTCACAACGCGTGACCCAGTCCTCTCGAATGGGAGCGGATCGCCCCCCAGACTCCCCCTCG CTCACAGACACACGCACAGGTACTAGCACACAGCAACACGCAGTGTCAGGGTCACGACCTAGTCCGCTCCAGAAT GTGGGAGCTGGGATTGCGGCTATCCCCAATGAGACATGGGAACAATGGTCTGCTCAATTGAATGCCTTGGTGGAC GATTTGTCTGCAAAGGGAGCATTACCCCCTGCTCACTTGAGCCAGACCACTATTGTTCGGCCTCGGATTAACCTG TTGCAGCAGGCCATTAATCGTAAGGATGCTTTCTATTTGGTGATACATCAATTGTACTGCCGATATAGCACGGAT GCAAGCACATTGGGTCAAATTAGAGTCCCCAACGCGGGCATGAAATTGCTCAGGCTTATTCTGGATGATAATGCA AAGATGCATGATGGCGCTACCAATGGATTTGCCCATTTCCCGGCATCTCCACAGCAGTTGATGCACACAAACTGG TACATTCAGGTGCTGTCTGGTGTTCCTGAGTTTTTAGCACGGCTTGCGAATGAATGGCATGGAATCTTGCACCAG GCTCGTCATCCCCCGTTGGTATCTCACCTTTGGCAGTCACTCGCTTGTCCATCTCAGATTTTGATGTCGGTGATG TTCACGTGTGTTGCACGGCACCTTCACCATGACAAAGACATGGATGCCCTGCTGAAGTTATTTTGGAAAGATTTG GAAGCTTTTGAGAAGTGTAGGGACTCTAGACTTCCCGGGACCACTCAGCAGGCTCTCAACTGGAAATTCGTCCAA GAGTATCGCAGCTTCCCGCCTAAATACCTACCACAAACACCACAAACACCATCCTCCCACTCTGCACCACCTCCT AGACCTCAGAATCGAGCCATGCCTCAAGCTACTCCAGGAGTACCTTCCTATCCCAGATCTTCGGTTGCTGGTGTC AGTCAACCTGCCACAAATTCACCTGCTCCAAGCCCAATTGGTGCACCTTTGCAGCAGCTTCCCTCAAATTCCCCC CGGGGTCAGGTTGTTGGACCGGCTGCTGGGCCCTATCAATCTGGCGTAAACCCACAAATGCAGAATACCCCGCAA TCTCATTACAATCCCATACCACAGGGGCAAGGGCCGAGACAGGAACACGGATGGTGGTATCCGGGGAGTCCACAT ATGAATCAGCAACAGCATATGTATCTGCATACAAATCCACATATGAACCCACAGATGCAAATGCACATACAGACA TCGATCGGACAAGTAGCATCTTCTCCGAGGCACCAATCACTGCCAGGCTCACATGGTCAACAAATACCTAGTCAA CAATTACACGGTCGAACAATGACTCCAATATCGCCTGCTAACCCCTCCCTCCAATCAAGTGCTCTCACCCCTACA CAGTCAGCGCAATTGCTCCATGCTCCATCGTCCATATCCACGACGCCGACTACAACAAGCCACATGGCCCAGCAC CCGATGCCACCACAAAGGCCTAATAACCATCATAACCGACAACATTCGACGGCTTTGCAGTCGTCTGCTTCACCG GTCACACGTGCGGCTCAGGGACAGCATCACCAGCCTTCGCTTAACTCTGCTTTCTTCCCGGTACCTGGCTACAGA GCACCTATGACGGTGAATCCAAATCCAACGCGTCTCGGTCTACATCTGGTTGATCTTCGCGATCCTATGAAGAGG CTGGTAAAACAGGGTTCGGATGGTAATGACATCGAGACTGATTTGTTTACCTATCTCAAAACATTCGTTGTACAC CCAACCATCGTCAACGTTGACCAGCCAATCTACACATGGAATTTCTCTTTCACGCATGATGAGCGCCAAAAGTTC CCACACATAGCTCACGGGAAACAGAGCCAACATTCGGTTTGGACCTTTAGGCCCGGTTGCCGGACTATTCGCCTG CGATGCATTCGTCTTCCTGGCAATCCGGACACTGTGGCGGAGAAGACCTGGTGTACTGCGAACACTTTCTGGCCC AGTGTCTTCTATATTAGCGTGAACGACAAAGAGCTCTATGTGCGCCGAAAGGTTCACAACGGAAAAGATCTGCCT TTGGACATTACCGAGTACATCAAAACAGGCGAAAACAGCGTACGGCTCGATATGATCTTAGGACAGGATGAGTGT AAGACCTCCAAATTCGTCTTCGGGGTGGAGGTCATGGAGGTTGCCGAGTTCGACCAGATACTCAGCCTGATCCAA TCCGTCCCAGCTGCCGAATCTCGTGCAGCCATCAAAAAGCGTCTTGCTCCTACCACCGATGACGATGATTTGGCC GTGGTCACCGACAACCTCACGATCGACCTGGTGGACCCTTTCATGGCACGCATCTTCGATATTCCCGTTCGCTCG CGCTATTGCTTCCACCACGAATGCTTCGACCGTGACACTTTTATAAGAACCAGAAATTCCGTATCCGGCCCGACA CCGATGGTCGATAACTGGCGCTGCCCGATCTGCAAGGGAGATGCACGCCCGCAGTTCTTGGTCGTTGATCAGTTC CTTGTCGATGTCCACGCCCAGCTTGCTAGAACGAACGGACTCGATGGGATTAGAGCAATCCAGATCAAAGTCGAT GGAACCTGGACCCCCAAGTACGACACTGATGAGATCTCGCCTGTGACAGACAACCCCTTCTCTCCGAAGCGCAAG GCTGAAGGCTCTTTGGGCCCTGTTCCCGTACGCCCTAGGAACAATGTATCTCATGGCAGTCACAGCCCGGCTGTT CGCACCCAAGAACATACGGTTATTGAATTGGACTAA |
Transcript | >Pro_DTO377G3_2|g5037.t1 ATGGTATCACCTAAATCGCGATCGCTCGCTAGTGCAGATCATATTGAGGAGTCCAACACTACTGCCAGTCTGTTC TTAGGCGGCGTGCGGAGACACTGGATGGGCCCGCAGGCTAACGCCCCGGAGAATTCGGCCGCGCGAAAACCTCGC GTTGAGGTTGATCCTCCAGTCCCTCCCAAATCCCTTCCCAGCGAGACTGTCTTAATGTCCCCCGTCACGCCTGGT GAGACCCTAACCCAACCTCCCGCACGTGGTCCTGTTGATGCGGCAAAAAAGCCCGACACGCGACCGACGGCTCTT CCCTCACCGGTTCTCAGTACAAATTCTCACCCAAGTCCCGTCAACGCCGATGCGATCATCTCAGATAGACCTTCC ACGCTGCCGCCAATCTCTACACAACTCACGGCACAGCGTGGCGATGATGAGCGCATGGCGGTCCAACCTCCTCCG AGCGGGCTCACCGCGTCACAACGCGTGACCCAGTCCTCTCGAATGGGAGCGGATCGCCCCCCAGACTCCCCCTCG CTCACAGACACACGCACAGGTACTAGCACACAGCAACACGCAGTGTCAGGGTCACGACCTAGTCCGCTCCAGAAT GTGGGAGCTGGGATTGCGGCTATCCCCAATGAGACATGGGAACAATGGTCTGCTCAATTGAATGCCTTGGTGGAC GATTTGTCTGCAAAGGGAGCATTACCCCCTGCTCACTTGAGCCAGACCACTATTGTTCGGCCTCGGATTAACCTG TTGCAGCAGGCCATTAATCGTAAGGATGCTTTCTATTTGGTGATACATCAATTGTACTGCCGATATAGCACGGAT GCAAGCACATTGGGTCAAATTAGAGTCCCCAACGCGGGCATGAAATTGCTCAGGCTTATTCTGGATGATAATGCA AAGATGCATGATGGCGCTACCAATGGATTTGCCCATTTCCCGGCATCTCCACAGCAGTTGATGCACACAAACTGG TACATTCAGGTGCTGTCTGGTGTTCCTGAGTTTTTAGCACGGCTTGCGAATGAATGGCATGGAATCTTGCACCAG GCTCGTCATCCCCCGTTGGTATCTCACCTTTGGCAGTCACTCGCTTGTCCATCTCAGATTTTGATGTCGGTGATG TTCACGTGTGTTGCACGGCACCTTCACCATGACAAAGACATGGATGCCCTGCTGAAGTTATTTTGGAAAGATTTG GAAGCTTTTGAGAAGTGTAGGGACTCTAGACTTCCCGGGACCACTCAGCAGGCTCTCAACTGGAAATTCGTCCAA GAGTATCGCAGCTTCCCGCCTAAATACCTACCACAAACACCACAAACACCATCCTCCCACTCTGCACCACCTCCT AGACCTCAGAATCGAGCCATGCCTCAAGCTACTCCAGGAGTACCTTCCTATCCCAGATCTTCGGTTGCTGGTGTC AGTCAACCTGCCACAAATTCACCTGCTCCAAGCCCAATTGGTGCACCTTTGCAGCAGCTTCCCTCAAATTCCCCC CGGGGTCAGGTTGTTGGACCGGCTGCTGGGCCCTATCAATCTGGCGTAAACCCACAAATGCAGAATACCCCGCAA TCTCATTACAATCCCATACCACAGGGGCAAGGGCCGAGACAGGAACACGGATGGTGGTATCCGGGGAGTCCACAT ATGAATCAGCAACAGCATATGTATCTGCATACAAATCCACATATGAACCCACAGATGCAAATGCACATACAGACA TCGATCGGACAAGTAGCATCTTCTCCGAGGCACCAATCACTGCCAGGCTCACATGGTCAACAAATACCTAGTCAA CAATTACACGGTCGAACAATGACTCCAATATCGCCTGCTAACCCCTCCCTCCAATCAAGTGCTCTCACCCCTACA CAGTCAGCGCAATTGCTCCATGCTCCATCGTCCATATCCACGACGCCGACTACAACAAGCCACATGGCCCAGCAC CCGATGCCACCACAAAGGCCTAATAACCATCATAACCGACAACATTCGACGGCTTTGCAGTCGTCTGCTTCACCG GTCACACGTGCGGCTCAGGGACAGCATCACCAGCCTTCGCTTAACTCTGCTTTCTTCCCGGTACCTGGCTACAGA GCACCTATGACGGTGAATCCAAATCCAACGCGTCTCGGTCTACATCTGGTTGATCTTCGCGATCCTATGAAGAGG CTGGTAAAACAGGGTTCGGATGGTAATGACATCGAGACTGATTTGTTTACCTATCTCAAAACATTCGTTGTACAC CCAACCATCGTCAACGTTGACCAGCCAATCTACACATGGAATTTCTCTTTCACGCATGATGAGCGCCAAAAGTTC CCACACATAGCTCACGGGAAACAGAGCCAACATTCGGTTTGGACCTTTAGGCCCGGTTGCCGGACTATTCGCCTG CGATGCATTCGTCTTCCTGGCAATCCGGACACTGTGGCGGAGAAGACCTGGTGTACTGCGAACACTTTCTGGCCC AGTGTCTTCTATATTAGCGTGAACGACAAAGAGCTCTATGTGCGCCGAAAGGTTCACAACGGAAAAGATCTGCCT TTGGACATTACCGAGTACATCAAAACAGGCGAAAACAGCGTACGGCTCGATATGATCTTAGGACAGGATGAGTGT AAGACCTCCAAATTCGTCTTCGGGGTGGAGGTCATGGAGGTTGCCGAGTTCGACCAGATACTCAGCCTGATCCAA TCCGTCCCAGCTGCCGAATCTCGTGCAGCCATCAAAAAGCGTCTTGCTCCTACCACCGATGACGATGATTTGGCC GTGGTCACCGACAACCTCACGATCGACCTGGTGGACCCTTTCATGGCACGCATCTTCGATATTCCCGTTCGCTCG CGCTATTGCTTCCACCACGAATGCTTCGACCGTGACACTTTTATAAGAACCAGAAATTCCGTATCCGGCCCGACA CCGATGGTCGATAACTGGCGCTGCCCGATCTGCAAGGGAGATGCACGCCCGCAGTTCTTGGTCGTTGATCAGTTC CTTGTCGATGTCCACGCCCAGCTTGCTAGAACGAACGGACTCGATGGGATTAGAGCAATCCAGATCAAAGTCGAT GGAACCTGGACCCCCAAGTACGACACTGATGAGATCTCGCCTGTGACAGACAACCCCTTCTCTCCGAAGCGCAAG GCTGAAGGCTCTTTGGGCCCTGTTCCCGTACGCCCTAGGAACAATGTATCTCATGGCAGTCACAGCCCGGCTGTT CGCACCCAAGAACATACGGTTATTGAATTGGACTAA |
Gene | >Pro_DTO377G3_2|g5037.t1 ATGGTATCACCTAAATCGCGATCGCTCGCTAGTGCAGATCATATTGAGGAGTCCAACACTACTGCCAGTCTGTTC TTAGGCGGCGTGCGGAGACACTGGATGGGCCCGCAGGCTAACGCCCCGGAGAATTCGGCCGCGCGAAAACCTCGC GTTGAGGTTGATCCTCCAGTCCCTCCCAAATCCCTTCCCAGCGAGACTGTCTTAATGTCCCCCGTCACGCCTGGT GAGACCCTAACCCAACCTCCCGCACGTGGTCCTGTTGATGCGGCAAAAAAGCCCGACACGCGACCGACGGCTCTT CCCTCACCGGTTCTCAGTACAAATTCTCACCCAAGTCCCGTCAACGCCGATGCGATCATCTCAGATAGACCTTCC ACGCTGCCGCCAATCTCTACACAACTCACGGCACAGCGTGGCGATGATGAGCGCATGGCGGTCCAACCTCCTCCG AGCGGGCTCACCGCGTCACAACGCGTGACCCAGTCCTCTCGAATGGGAGCGGATCGCCCCCCAGACTCCCCCTCG CTCACAGACACACGCACAGGTACTAGCACACAGCAACACGCAGTGTCAGGGTCACGACCTAGTCCGCTCCAGAAT GTGGGAGCTGGGATTGCGGCTATCCCCAATGAGACATGGGAACAATGGTCTGCTCAATTGAATGCCTTGGTGGAC GATTTGTCTGCAAAGGGAGCATTACCCCCTGCTCACTTGAGCCAGACCACTATTGTTCGGCCTCGGATTAACCTG TTGCAGCAGGCCATTAATCGTAAGGATGCTTTCTATTTGGTGATACATCAATTGTACTGCCGATATAGCACGGAT GCAAGCACATTGGGTCAAATTAGAGTCCCCAACGCGGGCATGAAATTGCTCAGGCTTATTCTGGATGATAATGCA AAGATGCATGATGGCGCTACCAATGGATTTGCCCATTTCCCGGCATCTCCACAGCAGTTGATGCACACAAACTGG TACATTCAGGTGCTGTCTGGTGTTCCTGAGTTTTTAGCACGGCTTGCGAATGAATGGCATGGAATCTTGCACCAG GCTCGTCATCCCCCGTTGGTATCTCACCTTTGGCAGTCACTCGCTTGTCCATCTCAGATTTTGATGTCGGTGATG TTCACGTGTGTTGCACGGCACCTTCACCATGACAAAGACATGGATGCCCTGCTGAAGTTATTTTGGAAAGATTTG GAAGCTTTTGAGAAGTGTAGGGACTCTAGACTTCCCGGGACCACTCAGCAGGCTCTCAACTGGAAATTCGTCCAA GAGTATCGCAGCTTCCCGCCTAAATACCTACCACAAACACCACAAACACCATCCTCCCACTCTGCACCACCTCCT AGACCTCAGAATCGAGCCATGCCTCAAGCTACTCCAGGAGTACCTTCCTATCCCAGATCTTCGGTTGCTGGTGTC AGTCAACCTGCCACAAATTCACCTGCTCCAAGCCCAATTGGTGCACCTTTGCAGCAGCTTCCCTCAAATTCCCCC CGGGGTCAGGTTGTTGGACCGGCTGCTGGGCCCTATCAATCTGGCGTAAACCCACAAATGCAGAATACCCCGCAA TCTCATTACAATCCCATACCACAGGGGCAAGGGCCGAGACAGGAACACGGATGGTGGTATCCGGGGAGTCCACAT ATGAATCAGCAACAGCATATGTATCTGCATACAAATCCACATATGAACCCACAGATGCAAATGCACATACAGACA TCGATCGGACAAGTAGCATCTTCTCCGAGGCACCAATCACTGCCAGGCTCACATGGTCAACAAATACCTAGTCAA CAATTACACGGTCGAACAATGACTCCAATATCGCCTGCTAACCCCTCCCTCCAATCAAGTGCTCTCACCCCTACA CAGTCAGCGCAATTGCTCCATGCTCCATCGTCCATATCCACGACGCCGACTACAACAAGCCACATGGCCCAGCAC CCGATGCCACCACAAAGGCCTAATAACCATCATAACCGACAACATTCGACGGCTTTGCAGTCGTCTGCTTCACCG GTCACACGTGCGGCTCAGGGACAGCATCACCAGCCTTCGCTTAACTCTGCTTTCTTCCCGGTACCTGGCTACAGA GCACCTATGACGGTGAATCCAAATCCAACGCGTCTCGGTCTACATCTGGTTGATCTTCGCGATCCTATGAAGAGG CTGGTAAAACAGGGTTCGGATGGTAATGACATCGAGACTGATTTGTTTACCTATCTCAAAACATTCGTTGTACAC CCAACCATCGTCAACGTTGACCAGCCAATCTACACATGGAATTTCTCTTTCACGCATGATGAGCGCCAAAAGTTC CCACACATAGCTCACGGGAAACAGAGCCAACATTCGGTTTGGACCTTTAGGCCCGGTTGCCGGACTATTCGCCTG CGATGCATTCGTCTTCCTGGCAATCCGGACACTGTGGCGGAGAAGACCTGGTGTACTGCGAACACTTTCTGGCCC AGTGTCTTCTATATTAGCGTGAACGACAAAGAGCTCTATGTGCGCCGAAAGGTTCACAACGGAAAAGATCTGCCT TTGGACATTACCGAGTACATCAAAACAGGCGAAAACAGCGTACGGCTCGATATGATCTTAGGACAGGATGAGTGT AAGACCTCCAAATTCGTCTTCGGGGTGGAGGTCATGGAGGTTGCCGAGTTCGACCAGATACTCAGCCTGATCCAA TCCGTCCCAGCTGCCGAATCTCGTGCAGCCATCAAAAAGCGTCTTGCTCCTACCACCGATGACGATGATTTGGCC GTGGTCACCGACAACCTCACGATCGACCTGGTGGACCCTTTCATGGCACGCATCTTCGATATTCCCGTTCGCTCG CGCTATTGCTTCCACCACGAATGCTTCGACCGTGACACTTTTATAAGAACCAGAAATTCCGTATCCGGCCCGACA CCGATGGTCGATAACTGGCGCTGCCCGATCTGCAAGGGAGATGCACGCCCGCAGTTCTTGGTCGTTGATCAGTTC CTTGTCGATGTCCACGCCCAGCTTGCTAGAACGAACGGACTCGATGGGATTAGAGCAATCCAGATCAAAGTCGAT GGAACCTGGACCCCCAAGTACGACACTGATGAGATCTCGCCTGTGACAGACAACCCCTTCTCTCCGAAGCGCAAG GCTGAAGGCTCTTTGGGCCCTGTTCCCGTACGCCCTAGGAACAATGTATCTCATGGCAGTCACAGCCCGGCTGTT CGCACCCAAGAACATACGGTTATTGAATTGGACTAA |