Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5032.t1
Gene name
Locationscaffold_11:374895..376113
Strand-
Gene length (bp)1218
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01398 JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease 5.7E-33 32 142
PF13012 MitMem_reg Maintenance of mitochondrial structure and function 2.2E-11 177 293
PF14464 Prok-JAB Prokaryotic homologs of the JAB domain 3.4E-07 41 135

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5032.t1
MDRLNRMLQAAQGMGMGGAAPGGDTPNLIDNSETVHISSLALLKMLRHGRAGVPMEVMGLMLGEFVDEYTVRVVD
VFAMPQSGTGVSVEAVDPVFQTRMMEMLRQTGRPETVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVD
PIQSVKGKVVIDAFRLIQPQTVVMGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAIDYRKTGLEENMLMNLH
KHVWTEALEMSDFHEEGQHNVERMKQLVLLAEGYEKRIKEETELSKDQLKTRYVGKLDPKKHIEDVSQKLIEDNI
VAVSRQMIDKEASVARQSFKEDTNGAAMEVDEDL*
Coding >Pro_DTO377G3_2|g5032.t1
ATGGATCGTCTTAACCGGATGCTCCAGGCCGCTCAAGGCATGGGGATGGGGGGCGCTGCTCCTGGTGGTGATACT
CCAAACCTGATAGATAACTCAGAAACCGTCCACATCTCCTCCTTGGCTCTGCTGAAGATGCTACGACATGGCCGC
GCGGGTGTCCCGATGGAGGTCATGGGCCTGATGCTGGGCGAGTTCGTTGATGAATACACAGTTCGGGTAGTGGAC
GTCTTTGCTATGCCTCAGAGCGGTACTGGAGTCAGTGTTGAAGCAGTGGACCCCGTGTTCCAAACTAGAATGATG
GAAATGCTGCGACAGACGGGACGACCAGAAACTGTTGTTGGCTGGTACCACTCGCATCCCGGTTTCGGCTGCTGG
CTCTCCTCAGTCGATATCAACACTCAGCAATCCTTTGAGCAGCTCACACCGCGTGCGGTTGCCGTTGTCGTCGAT
CCTATCCAGTCAGTGAAGGGCAAGGTCGTCATTGACGCCTTCCGTCTCATCCAACCTCAGACAGTGGTGATGGGT
CAAGAGCCCCGCCAGACTACATCAAACTTGGGCCACCTCAACAAGCCTTCGATCCAGGCTCTGATCCACGGTCTC
AACCGCCACTATTACAGCATTGCAATTGATTACCGTAAGACAGGATTGGAAGAGAACATGTTGATGAACCTTCAC
AAGCATGTATGGACCGAGGCCTTGGAGATGAGTGACTTCCACGAGGAGGGTCAGCACAACGTGGAGCGCATGAAG
CAGCTTGTTCTCCTTGCGGAGGGCTACGAGAAGCGGATCAAAGAAGAGACGGAGCTGAGCAAGGATCAGCTGAAG
ACGAGATACGTTGGCAAGCTTGATCCCAAGAAGCACATCGAGGACGTAAGCCAAAAGTTGATTGAGGATAACATT
GTTGCCGTCTCGCGGCAGATGATTGACAAGGAAGCTTCGGTGGCACGGCAGTCATTCAAGGAAGACACGAACGGT
GCTGCCATGGAAGTTGATGAAGATCTCTAA
Transcript >Pro_DTO377G3_2|g5032.t1
ATGGATCGTCTTAACCGGATGCTCCAGGCCGCTCAAGGCATGGGGATGGGGGGCGCTGCTCCTGGTGGTGATACT
CCAAACCTGATAGATAACTCAGAAACCGTCCACATCTCCTCCTTGGCTCTGCTGAAGATGCTACGACATGGCCGC
GCGGGTGTCCCGATGGAGGTCATGGGCCTGATGCTGGGCGAGTTCGTTGATGAATACACAGTTCGGGTAGTGGAC
GTCTTTGCTATGCCTCAGAGCGGTACTGGAGTCAGTGTTGAAGCAGTGGACCCCGTGTTCCAAACTAGAATGATG
GAAATGCTGCGACAGACGGGACGACCAGAAACTGTTGTTGGCTGGTACCACTCGCATCCCGGTTTCGGCTGCTGG
CTCTCCTCAGTCGATATCAACACTCAGCAATCCTTTGAGCAGCTCACACCGCGTGCGGTTGCCGTTGTCGTCGAT
CCTATCCAGTCAGTGAAGGGCAAGGTCGTCATTGACGCCTTCCGTCTCATCCAACCTCAGACAGTGGTGATGGGT
CAAGAGCCCCGCCAGACTACATCAAACTTGGGCCACCTCAACAAGCCTTCGATCCAGGCTCTGATCCACGGTCTC
AACCGCCACTATTACAGCATTGCAATTGATTACCGTAAGACAGGATTGGAAGAGAACATGTTGATGAACCTTCAC
AAGCATGTATGGACCGAGGCCTTGGAGATGAGTGACTTCCACGAGGAGGGTCAGCACAACGTGGAGCGCATGAAG
CAGCTTGTTCTCCTTGCGGAGGGCTACGAGAAGCGGATCAAAGAAGAGACGGAGCTGAGCAAGGATCAGCTGAAG
ACGAGATACGTTGGCAAGCTTGATCCCAAGAAGCACATCGAGGACGTAAGCCAAAAGTTGATTGAGGATAACATT
GTTGCCGTCTCGCGGCAGATGATTGACAAGGAAGCTTCGGTGGCACGGCAGTCATTCAAGGAAGACACGAACGGT
GCTGCCATGGAAGTTGATGAAGATCTCTAA
Gene >Pro_DTO377G3_2|g5032.t1
ATGGATCGTCTTAACCGGATGCTCCAGGCCGCTCAAGGCATGGGGATGGGGGGCGCTGCTCCTGGTGGTGTAAGT
TGGATAAGACTAATCTCCTTGTTGGAAGGCATTAATGGCAACATCCTAGCCTAGCTTCACCACGTCCCTCTACAT
TGACTAATGAGAGCCGTTGTTTAGGATACTCCAAACCTGATAGATAACTCAGAAACCGTCCACATCTCCTCCTTG
GCTCTGCTGAAGATGCTACGACATGGCCGCGCGGGTGTCCCGATGGAGGTCATGGGCCTGATGCTGGGCGAGTTC
GTTGATGAATACACAGTTCGGGTAGTGGACGTCTTTGCTATGCCTCAGAGCGGTACTGGAGTCAGTGTTGAAGCA
GTGGACCCCGTGTTCCAAACTAGAATGATGGAAATGCTGCGACAGACGGGACGGTAAGCCTATTAGCTGGTATAT
GATAGGGGAGTCCTCCATGCTGATGATTTCGTACAGACCAGAAACTGTTGTTGGCTGGTACCACTCGCATCCCGG
TTTCGGCTGCTGGCTCTCCTCAGTCGATATCAACACTCAGCAATCCTTTGAGCAGCTCACACCGCGTGCGGTTGC
CGTTGTCGTCGATCCTATCCAGTCAGTGAAGGGCAAGGTCGTCATTGACGCCTTCCGTCTCATCCAACCTCAGAC
AGTGGTGATGGGTCAAGAGCCCCGCCAGACTACATCAAACTTGGGCCACCTCAACAAGCCTTCGATCCAGGCTCT
GATCCACGGTCTCAACCGCCACTATTACAGCATTGCAATTGATTACCGTAAGACAGGATTGGAAGAGAACATGTT
GATGAACCTTCACAAGCATGTATGGACCGAGGCCTTGGAGATGAGTGACTTCCACGAGGAGGGTCAGCACAACGT
GGAGCGCATGAAGCAGCTTGTTCTCCTTGCGGAGGGCTACGAGAAGCGGATCAAAGAAGAGACGGAGCTGAGCAA
GGATCAGCTGAAGACGAGATACGTTGGCAAGCTTGATCCCAAGAAGCGTATGTTTTTTCCAAGACCCCCCCAAAA
AACATAGACTGACGCTTTGCAGACATCGAGGACGTAAGCCAAAAGTTGATTGAGGATAACATTGTTGCCGTCTCG
CGGCAGATGATTGACAAGGAAGCTTCGGTGGCACGGCAGTCATTCAAGGAAGACACGAACGGTGCTGCCATGGAA
GTTGATGAAGATCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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