Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5020.t1
Gene name
Locationscaffold_11:348454..348925
Strand+
Gene length (bp)471
Transcript length (bp)471
Coding sequence length (bp)471
Protein length (aa) 157

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12796 Ank_2 Ankyrin repeats (3 copies) 3.2E-08 2 94
PF13637 Ank_4 Ankyrin repeats (many copies) 6.7E-07 34 84
PF00023 Ank Ankyrin repeat 1.2E-02 33 63

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5020.t1
MHAIQTAGPRVIMLMVVLNKSELDRPILGNNHQTALLFAVRHGSMASIKILLAAGVDVNARDDKGITPLALAAIR
RDEYKVALLLTVKGVDPNPHDKYGHSPYSWALHSGDESVLYVLREYAERTGIPLKGMKTQEEWAAEGDEPWDLHS
RPVYSL*
Coding >Pro_DTO377G3_2|g5020.t1
ATGCACGCAATCCAAACTGCAGGTCCGCGCGTCATCATGCTAATGGTTGTCCTGAACAAATCCGAGCTAGATCGG
CCGATCCTCGGCAATAACCACCAGACGGCTTTGTTATTTGCCGTCAGACATGGAAGTATGGCATCGATAAAGATT
CTTCTTGCTGCCGGTGTTGATGTCAATGCCAGAGATGATAAAGGGATTACTCCATTGGCATTAGCGGCAATTCGC
AGGGATGAATACAAGGTTGCGCTGTTGCTTACTGTTAAAGGAGTCGATCCAAACCCCCACGATAAATATGGGCAC
TCGCCATACTCTTGGGCACTACATTCCGGAGACGAGAGCGTCTTGTATGTTCTCCGAGAGTATGCCGAACGGACG
GGGATCCCTTTGAAGGGAATGAAGACCCAGGAGGAGTGGGCTGCAGAGGGCGACGAACCATGGGATTTACACTCA
CGACCTGTATATTCGTTGTAA
Transcript >Pro_DTO377G3_2|g5020.t1
ATGCACGCAATCCAAACTGCAGGTCCGCGCGTCATCATGCTAATGGTTGTCCTGAACAAATCCGAGCTAGATCGG
CCGATCCTCGGCAATAACCACCAGACGGCTTTGTTATTTGCCGTCAGACATGGAAGTATGGCATCGATAAAGATT
CTTCTTGCTGCCGGTGTTGATGTCAATGCCAGAGATGATAAAGGGATTACTCCATTGGCATTAGCGGCAATTCGC
AGGGATGAATACAAGGTTGCGCTGTTGCTTACTGTTAAAGGAGTCGATCCAAACCCCCACGATAAATATGGGCAC
TCGCCATACTCTTGGGCACTACATTCCGGAGACGAGAGCGTCTTGTATGTTCTCCGAGAGTATGCCGAACGGACG
GGGATCCCTTTGAAGGGAATGAAGACCCAGGAGGAGTGGGCTGCAGAGGGCGACGAACCATGGGATTTACACTCA
CGACCTGTATATTCGTTGTAA
Gene >Pro_DTO377G3_2|g5020.t1
ATGCACGCAATCCAAACTGCAGGTCCGCGCGTCATCATGCTAATGGTTGTCCTGAACAAATCCGAGCTAGATCGG
CCGATCCTCGGCAATAACCACCAGACGGCTTTGTTATTTGCCGTCAGACATGGAAGTATGGCATCGATAAAGATT
CTTCTTGCTGCCGGTGTTGATGTCAATGCCAGAGATGATAAAGGGATTACTCCATTGGCATTAGCGGCAATTCGC
AGGGATGAATACAAGGTTGCGCTGTTGCTTACTGTTAAAGGAGTCGATCCAAACCCCCACGATAAATATGGGCAC
TCGCCATACTCTTGGGCACTACATTCCGGAGACGAGAGCGTCTTGTATGTTCTCCGAGAGTATGCCGAACGGACG
GGGATCCCTTTGAAGGGAATGAAGACCCAGGAGGAGTGGGCTGCAGAGGGCGACGAACCATGGGATTTACACTCA
CGACCTGTATATTCGTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail