Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g5013.t1
Gene name
Locationscaffold_11:332339..333002
Strand-
Gene length (bp)663
Transcript length (bp)663
Coding sequence length (bp)663
Protein length (aa) 221

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03358 FMN_red NADPH-dependent FMN reductase 3.7E-29 5 164
PF02525 Flavodoxin_2 Flavodoxin-like fold 6.3E-08 43 125

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g5013.t1
MPPKRVAIVTSSTRSPRLNPTITQYVYDVLISDPTIPTNHSKATDTDPRHITFEILDLAKQSLPLYDESVIPAGL
PAEDPTPHYSKAHTRAWSAVVRQYDAFIFVTPQYNWSIPASLKNALDYLYFEWKGKPAGIVSYGGRGGGKAADHL
RGILTGLHMRVVGTAPALPVKFTGFPVGTLSEEEEKVELDERDLVGWREAGVEGMMRNLGMELVCELDKE*
Coding >Pro_DTO377G3_2|g5013.t1
ATGCCTCCCAAACGTGTCGCGATAGTCACCAGCAGCACCCGCAGCCCCCGGCTCAACCCCACGATAACGCAGTAC
GTCTATGACGTCCTCATCTCCGACCCGACAATCCCAACAAACCACAGCAAAGCAACCGACACAGACCCGCGCCAC
ATAACCTTCGAAATCCTCGACCTGGCAAAGCAGTCGCTACCCCTCTACGACGAATCCGTCATCCCCGCCGGCCTG
CCCGCCGAAGACCCCACCCCGCACTACAGCAAAGCGCACACGCGGGCGTGGTCCGCGGTGGTGCGCCAGTACGAT
GCTTTTATCTTCGTCACGCCGCAGTATAACTGGAGTATCCCTGCGAGTCTGAAGAACGCGCTCGATTATCTCTAC
TTCGAGTGGAAGGGGAAGCCGGCGGGGATTGTTTCGTATGGAGGGCGGGGTGGTGGGAAGGCGGCGGATCATCTG
CGTGGTATCTTGACCGGCTTGCACATGAGGGTGGTTGGCACGGCGCCTGCATTGCCGGTCAAGTTTACTGGGTTT
CCTGTTGGGACGTTGTCGGAGGAGGAAGAGAAGGTGGAGCTAGATGAGAGGGATCTTGTTGGATGGAGGGAAGCT
GGGGTTGAGGGGATGATGCGAAACTTGGGAATGGAATTGGTTTGTGAATTGGATAAGGAGTGA
Transcript >Pro_DTO377G3_2|g5013.t1
ATGCCTCCCAAACGTGTCGCGATAGTCACCAGCAGCACCCGCAGCCCCCGGCTCAACCCCACGATAACGCAGTAC
GTCTATGACGTCCTCATCTCCGACCCGACAATCCCAACAAACCACAGCAAAGCAACCGACACAGACCCGCGCCAC
ATAACCTTCGAAATCCTCGACCTGGCAAAGCAGTCGCTACCCCTCTACGACGAATCCGTCATCCCCGCCGGCCTG
CCCGCCGAAGACCCCACCCCGCACTACAGCAAAGCGCACACGCGGGCGTGGTCCGCGGTGGTGCGCCAGTACGAT
GCTTTTATCTTCGTCACGCCGCAGTATAACTGGAGTATCCCTGCGAGTCTGAAGAACGCGCTCGATTATCTCTAC
TTCGAGTGGAAGGGGAAGCCGGCGGGGATTGTTTCGTATGGAGGGCGGGGTGGTGGGAAGGCGGCGGATCATCTG
CGTGGTATCTTGACCGGCTTGCACATGAGGGTGGTTGGCACGGCGCCTGCATTGCCGGTCAAGTTTACTGGGTTT
CCTGTTGGGACGTTGTCGGAGGAGGAAGAGAAGGTGGAGCTAGATGAGAGGGATCTTGTTGGATGGAGGGAAGCT
GGGGTTGAGGGGATGATGCGAAACTTGGGAATGGAATTGGTTTGTGAATTGGATAAGGAGTGA
Gene >Pro_DTO377G3_2|g5013.t1
ATGCCTCCCAAACGTGTCGCGATAGTCACCAGCAGCACCCGCAGCCCCCGGCTCAACCCCACGATAACGCAGTAC
GTCTATGACGTCCTCATCTCCGACCCGACAATCCCAACAAACCACAGCAAAGCAACCGACACAGACCCGCGCCAC
ATAACCTTCGAAATCCTCGACCTGGCAAAGCAGTCGCTACCCCTCTACGACGAATCCGTCATCCCCGCCGGCCTG
CCCGCCGAAGACCCCACCCCGCACTACAGCAAAGCGCACACGCGGGCGTGGTCCGCGGTGGTGCGCCAGTACGAT
GCTTTTATCTTCGTCACGCCGCAGTATAACTGGAGTATCCCTGCGAGTCTGAAGAACGCGCTCGATTATCTCTAC
TTCGAGTGGAAGGGGAAGCCGGCGGGGATTGTTTCGTATGGAGGGCGGGGTGGTGGGAAGGCGGCGGATCATCTG
CGTGGTATCTTGACCGGCTTGCACATGAGGGTGGTTGGCACGGCGCCTGCATTGCCGGTCAAGTTTACTGGGTTT
CCTGTTGGGACGTTGTCGGAGGAGGAAGAGAAGGTGGAGCTAGATGAGAGGGATCTTGTTGGATGGAGGGAAGCT
GGGGTTGAGGGGATGATGCGAAACTTGGGAATGGAATTGGTTTGTGAATTGGATAAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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