Protein ID | Pro_DTO377G3_2|g5003.t1 |
Gene name | |
Location | scaffold_11:294517..296809 |
Strand | - |
Gene length (bp) | 2292 |
Transcript length (bp) | 2292 |
Coding sequence length (bp) | 2292 |
Protein length (aa) | 764 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01902 | Diphthami_syn_2 | Diphthamide synthase | 6.4E-12 | 113 | 282 |
PF01042 | Ribonuc_L-PSP | Endoribonuclease L-PSP | 3.3E-07 | 411 | 465 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5003.t1 MSAAQPSAPGLNVIALISGGKDSLYSILHCIRNGHKVVALANLYPEPRNKTASASPNQRKNDEEEDIDSFMYQTI GHSVIPLYETALQIPLYRQPITGGAVDTARIYGTRATTMDETESLVPLLRRIKQAHPEANAVSAGAILSTYQRTR IESVANRLGLIPIAWLWMYPSLPAPTARTADALAIRQAGLLEDMSAARCDARIIKVASGGLDEGFLWENVSGVGS GGRMMRRCLVKAMSRFAAAEDIRGAVLGEGGEYETLALDGPGFLWKQRIEVGSREEKVGDGGVAFVRLRGARCTA KSAWEIGDGIAPSDIRRPGLLDAVFEGVLGSALELFGSLDDSKSRAMTSTARSPDWPVCEPVHRLSGSTWTISNI VAPEAGPGAGQQMKAIAYKVEKVLKSFAHPKSGSRSTDDIVFATVLLNSMTDFGPMNDIYVSLFKKPNPPARVTV ACGDRLPSNVKVMVTFVVDLGARERRQALHVQSRSYWAPANIGPYSQALSVPLQNDSRLVYIAGQIPLDPGSMDL ARVEGSSSWIENYRLRAVLALQHLWRIGEAMQVNWWLGAVAFLARGDHANTQAQVAWRLWERMHALPDNEDEDDD DGPQLDAWDIKYGRRTEELTDTPVPSLPQFTALVESHTSIPPFLAVQVDELPRGSDIEWQGLGGLCEQVKLDIKG GTSSTTMDSQYKYTNIEIDAGSSDDTLKQILRSVKEAYCRDSSLSQAVLYTTYPVPEASWPVQVVPCRSVWGREG RRLSAGVVLQQFS* |
Coding | >Pro_DTO377G3_2|g5003.t1 ATGTCTGCAGCACAGCCTTCAGCCCCAGGGCTTAACGTGATTGCCCTAATCTCCGGTGGCAAAGACTCTCTCTAC TCGATCCTCCACTGCATCCGCAACGGCCACAAAGTGGTCGCCTTAGCCAACCTCTACCCAGAACCGCGGAACAAA ACCGCAAGCGCAAGTCCAAACCAACGCAAAAATGACGAAGAAGAAGACATCGATAGCTTCATGTACCAAACCATC GGCCACAGTGTAATCCCTCTCTACGAAACAGCCCTCCAAATCCCCCTCTACCGCCAACCCATCACAGGCGGCGCA GTCGACACAGCCCGTATCTATGGAACCAGAGCCACCACCATGGACGAGACCGAGTCTCTCGTCCCGCTTCTTCGT CGCATAAAACAGGCTCATCCAGAAGCCAACGCCGTATCTGCAGGCGCCATCCTTTCTACTTATCAGCGCACGCGA ATCGAGAGCGTCGCTAACCGCCTGGGTCTGATTCCCATTGCTTGGCTGTGGATGTATCCATCTCTTCCAGCCCCT ACGGCTAGAACGGCCGATGCCCTGGCAATACGCCAGGCGGGGCTGTTGGAGGATATGTCGGCCGCTAGGTGTGAT GCTCGTATTATCAAGGTCGCCTCCGGTGGCCTGGACGAGGGCTTCCTGTGGGAGAATGTCTCTGGTGTTGGGAGT GGCGGCCGCATGATGCGAAGGTGTCTTGTCAAGGCTATGAGTCGGTTTGCAGCTGCGGAAGATATCCGTGGCGCG GTGCTGGGTGAGGGCGGAGAGTATGAGACGCTTGCGCTGGATGGGCCTGGTTTCTTGTGGAAGCAGAGGATCGAG GTCGGTAGTCGGGAGGAGAAGGTTGGTGATGGGGGTGTTGCGTTTGTTAGGTTGAGGGGGGCTAGGTGTACGGCT AAGAGCGCGTGGGAGATTGGCGATGGCATTGCGCCGAGTGATATTAGGCGGCCTGGATTGTTAGATGCGGTTTTT GAGGGCGTGTTAGGATCTGCATTGGAACTTTTTGGCTCGCTTGACGATTCGAAATCGCGGGCGATGACGAGTACT GCTCGGTCGCCAGATTGGCCTGTCTGCGAGCCCGTGCATCGGTTGTCTGGTTCTACGTGGACTATTTCGAATATT GTTGCGCCCGAGGCTGGTCCCGGGGCAGGACAGCAGATGAAAGCGATTGCATACAAGGTCGAGAAAGTGCTCAAG TCCTTTGCCCACCCCAAGTCCGGTTCCCGATCAACAGACGACATTGTTTTCGCTACGGTGCTGCTAAATTCAATG ACCGACTTTGGACCAATGAATGACATCTACGTCTCGCTATTCAAGAAGCCCAATCCCCCCGCGCGAGTGACAGTG GCATGTGGAGACCGTCTCCCGTCTAACGTCAAGGTGATGGTCACATTCGTGGTGGACCTGGGTGCAAGGGAACGG CGCCAGGCCCTGCATGTTCAATCCAGGTCATACTGGGCGCCCGCAAATATTGGACCATATTCGCAAGCGTTGTCA GTTCCGTTGCAGAACGATAGCAGACTTGTGTACATTGCTGGTCAGATTCCTCTAGATCCTGGTTCTATGGACCTG GCGCGAGTCGAGGGGTCAAGTTCATGGATTGAAAATTACCGTCTTCGAGCTGTACTGGCCCTTCAGCATCTCTGG AGAATTGGTGAAGCCATGCAGGTAAACTGGTGGCTCGGTGCGGTGGCCTTCTTGGCTCGTGGCGACCACGCTAAT ACCCAGGCGCAAGTGGCATGGCGCCTCTGGGAAAGAATGCATGCTTTACCTGACAATGAGGACGAGGATGATGAC GATGGGCCACAGCTGGACGCGTGGGATATCAAATATGGCCGTCGCACAGAGGAGCTGACCGATACCCCTGTGCCC AGTCTGCCCCAGTTCACTGCTCTTGTTGAGTCTCACACATCCATTCCACCATTCCTGGCTGTTCAAGTGGATGAA CTACCACGAGGAAGCGATATTGAATGGCAAGGTCTAGGGGGCCTGTGCGAGCAGGTCAAGCTGGACATTAAAGGG GGGACATCTTCCACCACCATGGACAGTCAATACAAGTATACCAATATCGAGATCGACGCGGGTTCGTCGGACGAT ACATTGAAGCAAATATTGAGATCAGTGAAAGAGGCTTACTGTCGAGATTCCAGTCTGTCTCAGGCTGTGTTATAT ACCACATACCCAGTGCCTGAAGCTTCGTGGCCAGTGCAGGTTGTGCCGTGCAGATCAGTATGGGGGCGAGAAGGA CGAAGGTTGAGTGCAGGTGTGGTCCTGCAGCAGTTTAGTTAG |
Transcript | >Pro_DTO377G3_2|g5003.t1 ATGTCTGCAGCACAGCCTTCAGCCCCAGGGCTTAACGTGATTGCCCTAATCTCCGGTGGCAAAGACTCTCTCTAC TCGATCCTCCACTGCATCCGCAACGGCCACAAAGTGGTCGCCTTAGCCAACCTCTACCCAGAACCGCGGAACAAA ACCGCAAGCGCAAGTCCAAACCAACGCAAAAATGACGAAGAAGAAGACATCGATAGCTTCATGTACCAAACCATC GGCCACAGTGTAATCCCTCTCTACGAAACAGCCCTCCAAATCCCCCTCTACCGCCAACCCATCACAGGCGGCGCA GTCGACACAGCCCGTATCTATGGAACCAGAGCCACCACCATGGACGAGACCGAGTCTCTCGTCCCGCTTCTTCGT CGCATAAAACAGGCTCATCCAGAAGCCAACGCCGTATCTGCAGGCGCCATCCTTTCTACTTATCAGCGCACGCGA ATCGAGAGCGTCGCTAACCGCCTGGGTCTGATTCCCATTGCTTGGCTGTGGATGTATCCATCTCTTCCAGCCCCT ACGGCTAGAACGGCCGATGCCCTGGCAATACGCCAGGCGGGGCTGTTGGAGGATATGTCGGCCGCTAGGTGTGAT GCTCGTATTATCAAGGTCGCCTCCGGTGGCCTGGACGAGGGCTTCCTGTGGGAGAATGTCTCTGGTGTTGGGAGT GGCGGCCGCATGATGCGAAGGTGTCTTGTCAAGGCTATGAGTCGGTTTGCAGCTGCGGAAGATATCCGTGGCGCG GTGCTGGGTGAGGGCGGAGAGTATGAGACGCTTGCGCTGGATGGGCCTGGTTTCTTGTGGAAGCAGAGGATCGAG GTCGGTAGTCGGGAGGAGAAGGTTGGTGATGGGGGTGTTGCGTTTGTTAGGTTGAGGGGGGCTAGGTGTACGGCT AAGAGCGCGTGGGAGATTGGCGATGGCATTGCGCCGAGTGATATTAGGCGGCCTGGATTGTTAGATGCGGTTTTT GAGGGCGTGTTAGGATCTGCATTGGAACTTTTTGGCTCGCTTGACGATTCGAAATCGCGGGCGATGACGAGTACT GCTCGGTCGCCAGATTGGCCTGTCTGCGAGCCCGTGCATCGGTTGTCTGGTTCTACGTGGACTATTTCGAATATT GTTGCGCCCGAGGCTGGTCCCGGGGCAGGACAGCAGATGAAAGCGATTGCATACAAGGTCGAGAAAGTGCTCAAG TCCTTTGCCCACCCCAAGTCCGGTTCCCGATCAACAGACGACATTGTTTTCGCTACGGTGCTGCTAAATTCAATG ACCGACTTTGGACCAATGAATGACATCTACGTCTCGCTATTCAAGAAGCCCAATCCCCCCGCGCGAGTGACAGTG GCATGTGGAGACCGTCTCCCGTCTAACGTCAAGGTGATGGTCACATTCGTGGTGGACCTGGGTGCAAGGGAACGG CGCCAGGCCCTGCATGTTCAATCCAGGTCATACTGGGCGCCCGCAAATATTGGACCATATTCGCAAGCGTTGTCA GTTCCGTTGCAGAACGATAGCAGACTTGTGTACATTGCTGGTCAGATTCCTCTAGATCCTGGTTCTATGGACCTG GCGCGAGTCGAGGGGTCAAGTTCATGGATTGAAAATTACCGTCTTCGAGCTGTACTGGCCCTTCAGCATCTCTGG AGAATTGGTGAAGCCATGCAGGTAAACTGGTGGCTCGGTGCGGTGGCCTTCTTGGCTCGTGGCGACCACGCTAAT ACCCAGGCGCAAGTGGCATGGCGCCTCTGGGAAAGAATGCATGCTTTACCTGACAATGAGGACGAGGATGATGAC GATGGGCCACAGCTGGACGCGTGGGATATCAAATATGGCCGTCGCACAGAGGAGCTGACCGATACCCCTGTGCCC AGTCTGCCCCAGTTCACTGCTCTTGTTGAGTCTCACACATCCATTCCACCATTCCTGGCTGTTCAAGTGGATGAA CTACCACGAGGAAGCGATATTGAATGGCAAGGTCTAGGGGGCCTGTGCGAGCAGGTCAAGCTGGACATTAAAGGG GGGACATCTTCCACCACCATGGACAGTCAATACAAGTATACCAATATCGAGATCGACGCGGGTTCGTCGGACGAT ACATTGAAGCAAATATTGAGATCAGTGAAAGAGGCTTACTGTCGAGATTCCAGTCTGTCTCAGGCTGTGTTATAT ACCACATACCCAGTGCCTGAAGCTTCGTGGCCAGTGCAGGTTGTGCCGTGCAGATCAGTATGGGGGCGAGAAGGA CGAAGGTTGAGTGCAGGTGTGGTCCTGCAGCAGTTTAGTTAG |
Gene | >Pro_DTO377G3_2|g5003.t1 ATGTCTGCAGCACAGCCTTCAGCCCCAGGGCTTAACGTGATTGCCCTAATCTCCGGTGGCAAAGACTCTCTCTAC TCGATCCTCCACTGCATCCGCAACGGCCACAAAGTGGTCGCCTTAGCCAACCTCTACCCAGAACCGCGGAACAAA ACCGCAAGCGCAAGTCCAAACCAACGCAAAAATGACGAAGAAGAAGACATCGATAGCTTCATGTACCAAACCATC GGCCACAGTGTAATCCCTCTCTACGAAACAGCCCTCCAAATCCCCCTCTACCGCCAACCCATCACAGGCGGCGCA GTCGACACAGCCCGTATCTATGGAACCAGAGCCACCACCATGGACGAGACCGAGTCTCTCGTCCCGCTTCTTCGT CGCATAAAACAGGCTCATCCAGAAGCCAACGCCGTATCTGCAGGCGCCATCCTTTCTACTTATCAGCGCACGCGA ATCGAGAGCGTCGCTAACCGCCTGGGTCTGATTCCCATTGCTTGGCTGTGGATGTATCCATCTCTTCCAGCCCCT ACGGCTAGAACGGCCGATGCCCTGGCAATACGCCAGGCGGGGCTGTTGGAGGATATGTCGGCCGCTAGGTGTGAT GCTCGTATTATCAAGGTCGCCTCCGGTGGCCTGGACGAGGGCTTCCTGTGGGAGAATGTCTCTGGTGTTGGGAGT GGCGGCCGCATGATGCGAAGGTGTCTTGTCAAGGCTATGAGTCGGTTTGCAGCTGCGGAAGATATCCGTGGCGCG GTGCTGGGTGAGGGCGGAGAGTATGAGACGCTTGCGCTGGATGGGCCTGGTTTCTTGTGGAAGCAGAGGATCGAG GTCGGTAGTCGGGAGGAGAAGGTTGGTGATGGGGGTGTTGCGTTTGTTAGGTTGAGGGGGGCTAGGTGTACGGCT AAGAGCGCGTGGGAGATTGGCGATGGCATTGCGCCGAGTGATATTAGGCGGCCTGGATTGTTAGATGCGGTTTTT GAGGGCGTGTTAGGATCTGCATTGGAACTTTTTGGCTCGCTTGACGATTCGAAATCGCGGGCGATGACGAGTACT GCTCGGTCGCCAGATTGGCCTGTCTGCGAGCCCGTGCATCGGTTGTCTGGTTCTACGTGGACTATTTCGAATATT GTTGCGCCCGAGGCTGGTCCCGGGGCAGGACAGCAGATGAAAGCGATTGCATACAAGGTCGAGAAAGTGCTCAAG TCCTTTGCCCACCCCAAGTCCGGTTCCCGATCAACAGACGACATTGTTTTCGCTACGGTGCTGCTAAATTCAATG ACCGACTTTGGACCAATGAATGACATCTACGTCTCGCTATTCAAGAAGCCCAATCCCCCCGCGCGAGTGACAGTG GCATGTGGAGACCGTCTCCCGTCTAACGTCAAGGTGATGGTCACATTCGTGGTGGACCTGGGTGCAAGGGAACGG CGCCAGGCCCTGCATGTTCAATCCAGGTCATACTGGGCGCCCGCAAATATTGGACCATATTCGCAAGCGTTGTCA GTTCCGTTGCAGAACGATAGCAGACTTGTGTACATTGCTGGTCAGATTCCTCTAGATCCTGGTTCTATGGACCTG GCGCGAGTCGAGGGGTCAAGTTCATGGATTGAAAATTACCGTCTTCGAGCTGTACTGGCCCTTCAGCATCTCTGG AGAATTGGTGAAGCCATGCAGGTAAACTGGTGGCTCGGTGCGGTGGCCTTCTTGGCTCGTGGCGACCACGCTAAT ACCCAGGCGCAAGTGGCATGGCGCCTCTGGGAAAGAATGCATGCTTTACCTGACAATGAGGACGAGGATGATGAC GATGGGCCACAGCTGGACGCGTGGGATATCAAATATGGCCGTCGCACAGAGGAGCTGACCGATACCCCTGTGCCC AGTCTGCCCCAGTTCACTGCTCTTGTTGAGTCTCACACATCCATTCCACCATTCCTGGCTGTTCAAGTGGATGAA CTACCACGAGGAAGCGATATTGAATGGCAAGGTCTAGGGGGCCTGTGCGAGCAGGTCAAGCTGGACATTAAAGGG GGGACATCTTCCACCACCATGGACAGTCAATACAAGTATACCAATATCGAGATCGACGCGGGTTCGTCGGACGAT ACATTGAAGCAAATATTGAGATCAGTGAAAGAGGCTTACTGTCGAGATTCCAGTCTGTCTCAGGCTGTGTTATAT ACCACATACCCAGTGCCTGAAGCTTCGTGGCCAGTGCAGGTTGTGCCGTGCAGATCAGTATGGGGGCGAGAAGGA CGAAGGTTGAGTGCAGGTGTGGTCCTGCAGCAGTTTAGTTAG |