Protein ID | Pro_DTO377G3_2|g5002.t1 |
Gene name | |
Location | scaffold_11:291408..294174 |
Strand | - |
Gene length (bp) | 2766 |
Transcript length (bp) | 2709 |
Coding sequence length (bp) | 2709 |
Protein length (aa) | 903 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 15 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 155 | 174 | 19 |
2 | 189 | 207 | 18 |
3 | 228 | 250 | 22 |
4 | 260 | 279 | 19 |
5 | 547 | 564 | 17 |
6 | 579 | 598 | 19 |
7 | 637 | 659 | 22 |
8 | 685 | 707 | 22 |
9 | 737 | 759 | 22 |
10 | 779 | 798 | 19 |
11 | 817 | 839 | 22 |
12 | 849 | 871 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 31.44 | 19.03 | 43.86 |
5d_25C | Five days - 25 degrees Celsius | 25.70 | 15.32 | 36.07 |
7d_25C | Seven days - 25 degrees Celsius | 29.23 | 17.51 | 40.94 |
10d_25C | Ten days - 25 degrees Celsius | 27.30 | 16.35 | 38.25 |
7d_15C | Seven days - 15 degrees Celsius | 25.44 | 15.15 | 35.73 |
7d_30C | Seven days - 30 degrees Celsius | 20.72 | 12.07 | 29.37 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.421956 | no |
3d_25C | 7d_25C | 0.818739 | no |
3d_25C | 7d_15C | 0.391940 | no |
3d_25C | 7d_30C | 0.057742 | no |
3d_25C | 10d_25C | 0.609995 | no |
5d_25C | 7d_25C | 0.650377 | no |
5d_25C | 7d_15C | 0.977898 | no |
5d_25C | 7d_30C | 0.400307 | no |
5d_25C | 10d_25C | 0.854619 | no |
7d_25C | 7d_15C | 0.617977 | no |
7d_25C | 7d_30C | 0.134694 | no |
7d_25C | 10d_25C | 0.831730 | no |
7d_15C | 7d_30C | 0.429622 | no |
7d_15C | 10d_25C | 0.827040 | no |
7d_30C | 10d_25C | 0.260297 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g5002.t1 MSSPWKEEQEATFRTSTPLDPEAFAEDLRLFNRSPHPYHRSRRLGSCTPSDGDRLHPLSSYSRSSRTTSDSGTEA DDESTGILRGLPAPPLRPRKGLRSGGVGLTEVDDWLPSLQPWPSFVRPILRTSRRSSEEELEEEAFEERLRFRRQ RRVEVLRRLLEAALLLSVGGVVLYQDRARSLAWEWRKELAAHALVVLGLYASYPLAVRASQGRSWRIWRIWSTKR TYFSIPASFDPAPLLYPILIPIFVSLSLSNHLPPLIMPNIILSLSSLPTPVIPFQNRANGFDNLHWMVSMIPILV SEHFSSDHTVPKPLTLRGLDAESLILLFPLHQALIPTLDFLLTTSILPAELQLLTTALINLYLFAASPQMEILKA LLWLGGMCLFASCRHILRWEVSLARIPSWKFRRAPHGAQSPRKFLNMMDHRICEKLSRTAHVPSDDATSDSDGPN GFMFSRPRKTKTMQDNRSFRPSAEPTSAVDQVTTEAIFEKHARIVHRRRHTISTFDEVVREERVHTTPGGRRKKM MGPGLASFLSLTSAQAQVRKWLYAFYVYVLSLIIILGPIRKYVAEHALQGQDPFGWAIGYLLGNFSKIRFWVLML NLEYWIELPPRPDADNLSASCFLGSVEHIRQATFGAAVTRLLLSGYCALVLLTGLAIVVKLSSVAEVDTRRKIFH GMMVVMFLPAIFVDPAFCAMALALVLSIFLLLDLFRASQLPPISRPLTYFLAPYVDGRDHRGPVIISHIFLLIGC SIPLWLSLSDLPRTGLGPWAGWEVPSRDVSMASGVICVGMGDAAASLIGRRYGRLKWFWGGGKSLEGSIAFVVAV TCGLIAVRAWLVLGGWPVSGLESAAVTAFSAHFWAWTLLKAVLAAAGTSATEAILTGCNDNVVVPVVLWLLVRGL GV* |
Coding | >Pro_DTO377G3_2|g5002.t1 ATGAGTTCGCCGTGGAAAGAAGAACAAGAAGCGACGTTTCGCACCAGTACACCTCTGGACCCCGAAGCGTTCGCC GAAGACCTCCGACTATTTAATCGCTCCCCCCATCCATACCACAGAAGTCGACGCCTCGGATCATGCACTCCCTCC GACGGCGACCGTCTCCACCCGCTCTCCTCCTACTCCAGGTCCTCACGAACAACCAGCGACAGTGGCACAGAGGCA GACGATGAAAGCACCGGTATTCTAAGGGGATTACCTGCCCCGCCCCTCCGTCCTCGAAAAGGCCTACGGTCTGGT GGGGTGGGTCTCACTGAGGTCGATGACTGGCTGCCAAGTCTGCAACCGTGGCCGTCATTTGTGCGGCCTATTTTG CGGACGTCGCGGCGGAGCTCGGAGGAAGAACTTGAGGAAGAGGCCTTTGAGGAGAGACTGAGGTTCAGGCGCCAG AGACGGGTGGAGGTTCTCCGGCGGTTGTTGGAGGCTGCGCTTTTGTTGTCTGTGGGTGGCGTGGTCTTGTACCAA GACCGGGCGCGCTCCTTAGCTTGGGAATGGAGAAAGGAGCTTGCTGCTCATGCCCTCGTGGTCTTGGGTCTCTAT GCCAGCTATCCGCTCGCTGTTCGAGCATCGCAAGGCCGAAGCTGGCGCATCTGGCGCATCTGGTCCACGAAACGG ACATACTTCTCAATACCCGCGAGCTTCGATCCGGCCCCCCTTCTCTATCCGATTCTTATCCCCATCTTCGTCTCG TTATCGCTGTCCAACCATCTCCCGCCACTTATCATGCCTAATATCATCCTCAGCCTCTCCTCTTTACCAACGCCT GTTATACCGTTCCAGAACCGGGCGAATGGATTTGATAACCTCCATTGGATGGTCTCTATGATTCCCATCCTCGTT TCCGAACATTTCTCCTCGGACCATACTGTACCCAAACCATTGACGCTTCGCGGGCTCGACGCAGAGTCTTTAATA CTTCTTTTCCCTTTGCATCAAGCGTTGATACCCACTTTAGACTTTTTGTTGACGACCAGCATTCTTCCCGCTGAG CTGCAGCTTTTGACAACTGCTTTGATCAACTTGTACTTGTTTGCGGCCTCTCCCCAGATGGAGATACTCAAAGCC TTGTTATGGCTTGGAGGCATGTGTTTGTTTGCTTCTTGTCGACATATACTGCGTTGGGAGGTTTCTTTGGCTAGA ATTCCCAGCTGGAAATTCCGCCGCGCCCCACATGGCGCGCAATCTCCCCGCAAATTCTTGAACATGATGGACCAT CGAATTTGTGAGAAGTTGAGTAGAACGGCGCACGTTCCATCGGACGATGCTACATCGGACAGCGATGGCCCTAAT GGCTTCATGTTTTCAAGGCCGCGCAAGACGAAGACCATGCAGGATAATCGCTCTTTCCGCCCATCGGCAGAGCCG ACATCTGCAGTCGACCAGGTCACGACGGAGGCGATTTTCGAGAAGCATGCTCGTATTGTGCATCGACGACGCCAT ACCATATCTACATTCGACGAAGTCGTTCGAGAGGAACGTGTCCACACCACCCCCGGTGGTAGACGCAAGAAAATG ATGGGTCCTGGCCTGGCCTCCTTCCTCTCGCTCACTTCAGCCCAGGCACAGGTCCGAAAATGGTTGTACGCATTT TACGTGTATGTTCTGTCGCTGATTATCATTCTTGGGCCTATTCGAAAATACGTAGCAGAGCACGCACTACAAGGC CAGGATCCGTTCGGTTGGGCTATCGGCTACCTGCTGGGAAACTTCTCGAAAATTCGCTTTTGGGTGCTTATGTTG AACCTTGAATACTGGATCGAACTGCCACCCCGCCCTGATGCAGATAATCTGAGTGCCTCCTGCTTCCTTGGGTCG GTCGAACATATTCGCCAGGCTACTTTTGGAGCTGCCGTGACCCGTCTACTACTCAGTGGATACTGCGCGTTGGTA CTACTGACAGGCCTGGCTATTGTGGTTAAGCTCAGCTCTGTTGCCGAGGTTGATACGCGCCGCAAGATTTTCCAC GGCATGATGGTGGTTATGTTCCTTCCCGCGATTTTTGTGGATCCAGCCTTCTGCGCCATGGCGCTAGCCTTGGTC CTCTCCATATTCCTTCTACTTGACCTATTCCGCGCATCTCAACTACCTCCAATTTCGCGACCGCTTACCTACTTT CTGGCCCCGTATGTTGACGGCCGTGATCACCGTGGCCCGGTCATCATCTCGCATATCTTCTTGCTAATTGGATGT TCGATACCCCTTTGGCTGTCGCTTTCCGATCTCCCTCGGACTGGCCTGGGCCCCTGGGCCGGTTGGGAGGTACCG TCACGGGATGTAAGCATGGCCAGCGGAGTTATCTGTGTTGGCATGGGCGACGCGGCTGCATCCCTCATTGGCCGA CGGTACGGCCGGCTGAAATGGTTCTGGGGAGGCGGCAAATCACTTGAAGGCAGCATTGCTTTCGTTGTAGCTGTC ACCTGCGGGCTGATCGCGGTTCGTGCCTGGTTGGTGCTCGGTGGCTGGCCCGTGTCTGGGCTCGAATCGGCTGCA GTGACAGCTTTCTCCGCTCACTTCTGGGCCTGGACTTTGCTCAAGGCGGTTCTGGCGGCAGCCGGAACGAGCGCC ACCGAAGCAATCCTTACCGGTTGTAATGACAATGTCGTGGTCCCAGTGGTGTTATGGCTGCTGGTGCGGGGTCTT GGCGTCTGA |
Transcript | >Pro_DTO377G3_2|g5002.t1 ATGAGTTCGCCGTGGAAAGAAGAACAAGAAGCGACGTTTCGCACCAGTACACCTCTGGACCCCGAAGCGTTCGCC GAAGACCTCCGACTATTTAATCGCTCCCCCCATCCATACCACAGAAGTCGACGCCTCGGATCATGCACTCCCTCC GACGGCGACCGTCTCCACCCGCTCTCCTCCTACTCCAGGTCCTCACGAACAACCAGCGACAGTGGCACAGAGGCA GACGATGAAAGCACCGGTATTCTAAGGGGATTACCTGCCCCGCCCCTCCGTCCTCGAAAAGGCCTACGGTCTGGT GGGGTGGGTCTCACTGAGGTCGATGACTGGCTGCCAAGTCTGCAACCGTGGCCGTCATTTGTGCGGCCTATTTTG CGGACGTCGCGGCGGAGCTCGGAGGAAGAACTTGAGGAAGAGGCCTTTGAGGAGAGACTGAGGTTCAGGCGCCAG AGACGGGTGGAGGTTCTCCGGCGGTTGTTGGAGGCTGCGCTTTTGTTGTCTGTGGGTGGCGTGGTCTTGTACCAA GACCGGGCGCGCTCCTTAGCTTGGGAATGGAGAAAGGAGCTTGCTGCTCATGCCCTCGTGGTCTTGGGTCTCTAT GCCAGCTATCCGCTCGCTGTTCGAGCATCGCAAGGCCGAAGCTGGCGCATCTGGCGCATCTGGTCCACGAAACGG ACATACTTCTCAATACCCGCGAGCTTCGATCCGGCCCCCCTTCTCTATCCGATTCTTATCCCCATCTTCGTCTCG TTATCGCTGTCCAACCATCTCCCGCCACTTATCATGCCTAATATCATCCTCAGCCTCTCCTCTTTACCAACGCCT GTTATACCGTTCCAGAACCGGGCGAATGGATTTGATAACCTCCATTGGATGGTCTCTATGATTCCCATCCTCGTT TCCGAACATTTCTCCTCGGACCATACTGTACCCAAACCATTGACGCTTCGCGGGCTCGACGCAGAGTCTTTAATA CTTCTTTTCCCTTTGCATCAAGCGTTGATACCCACTTTAGACTTTTTGTTGACGACCAGCATTCTTCCCGCTGAG CTGCAGCTTTTGACAACTGCTTTGATCAACTTGTACTTGTTTGCGGCCTCTCCCCAGATGGAGATACTCAAAGCC TTGTTATGGCTTGGAGGCATGTGTTTGTTTGCTTCTTGTCGACATATACTGCGTTGGGAGGTTTCTTTGGCTAGA ATTCCCAGCTGGAAATTCCGCCGCGCCCCACATGGCGCGCAATCTCCCCGCAAATTCTTGAACATGATGGACCAT CGAATTTGTGAGAAGTTGAGTAGAACGGCGCACGTTCCATCGGACGATGCTACATCGGACAGCGATGGCCCTAAT GGCTTCATGTTTTCAAGGCCGCGCAAGACGAAGACCATGCAGGATAATCGCTCTTTCCGCCCATCGGCAGAGCCG ACATCTGCAGTCGACCAGGTCACGACGGAGGCGATTTTCGAGAAGCATGCTCGTATTGTGCATCGACGACGCCAT ACCATATCTACATTCGACGAAGTCGTTCGAGAGGAACGTGTCCACACCACCCCCGGTGGTAGACGCAAGAAAATG ATGGGTCCTGGCCTGGCCTCCTTCCTCTCGCTCACTTCAGCCCAGGCACAGGTCCGAAAATGGTTGTACGCATTT TACGTGTATGTTCTGTCGCTGATTATCATTCTTGGGCCTATTCGAAAATACGTAGCAGAGCACGCACTACAAGGC CAGGATCCGTTCGGTTGGGCTATCGGCTACCTGCTGGGAAACTTCTCGAAAATTCGCTTTTGGGTGCTTATGTTG AACCTTGAATACTGGATCGAACTGCCACCCCGCCCTGATGCAGATAATCTGAGTGCCTCCTGCTTCCTTGGGTCG GTCGAACATATTCGCCAGGCTACTTTTGGAGCTGCCGTGACCCGTCTACTACTCAGTGGATACTGCGCGTTGGTA CTACTGACAGGCCTGGCTATTGTGGTTAAGCTCAGCTCTGTTGCCGAGGTTGATACGCGCCGCAAGATTTTCCAC GGCATGATGGTGGTTATGTTCCTTCCCGCGATTTTTGTGGATCCAGCCTTCTGCGCCATGGCGCTAGCCTTGGTC CTCTCCATATTCCTTCTACTTGACCTATTCCGCGCATCTCAACTACCTCCAATTTCGCGACCGCTTACCTACTTT CTGGCCCCGTATGTTGACGGCCGTGATCACCGTGGCCCGGTCATCATCTCGCATATCTTCTTGCTAATTGGATGT TCGATACCCCTTTGGCTGTCGCTTTCCGATCTCCCTCGGACTGGCCTGGGCCCCTGGGCCGGTTGGGAGGTACCG TCACGGGATGTAAGCATGGCCAGCGGAGTTATCTGTGTTGGCATGGGCGACGCGGCTGCATCCCTCATTGGCCGA CGGTACGGCCGGCTGAAATGGTTCTGGGGAGGCGGCAAATCACTTGAAGGCAGCATTGCTTTCGTTGTAGCTGTC ACCTGCGGGCTGATCGCGGTTCGTGCCTGGTTGGTGCTCGGTGGCTGGCCCGTGTCTGGGCTCGAATCGGCTGCA GTGACAGCTTTCTCCGCTCACTTCTGGGCCTGGACTTTGCTCAAGGCGGTTCTGGCGGCAGCCGGAACGAGCGCC ACCGAAGCAATCCTTACCGGTTGTAATGACAATGTCGTGGTCCCAGTGGTGTTATGGCTGCTGGTGCGGGGTCTT GGCGTCTGA |
Gene | >Pro_DTO377G3_2|g5002.t1 ATGAGTTCGCCGTGGAAAGAAGAACAAGAAGCGACGTTTCGCACCAGTACACCTCTGGACCCCGAAGCGTTCGCC GAAGACCTCCGACTATTTAATCGCTCCCCCCATCCATACCACAGAAGTCGACGCCTCGGATCATGCACTCCCTCC GACGGCGACCGTCTCCACCCGCTCTCCTCCTACTCCAGGTCCTCACGAACAACCAGCGACAGTGGCACAGAGGCA GACGATGAAAGCACCGGTATTCTAAGGGGATTACCTGCCCCGCCCCTCCGTCCTCGAAAAGGCCTACGGTCTGGT GGGGTGGGTCTCACTGAGGTCGATGACTGGCTGCCAAGTCTGCAACCGTGGCCGTCATTTGTGCGGCCTATTTTG CGGACGTCGCGGCGGAGCTCGGAGGAAGAACTTGAGGAAGAGGCCTTTGAGGAGAGACTGAGGTTCAGGCGCCAG AGACGGGTGGAGGTTCTCCGGCGGTTGTTGGAGGCTGCGCTTTTGTTGTCTGTGGGTGGCGTGGTCTTGTACCAA GACCGGGCGCGCTCCTTAGCTTGGGAATGGAGAAAGGGTATGGGGAAAACTGATATTGCTACCAAAAATCTGGGG CGCGCTAATTGATATACAGAGCTTGCTGCTCATGCCCTCGTGGTCTTGGGTCTCTATGCCAGCTATCCGCTCGCT GTTCGAGCATCGCAAGGCCGAAGCTGGCGCATCTGGCGCATCTGGTCCACGAAACGGACATACTTCTCAATACCC GCGAGCTTCGATCCGGCCCCCCTTCTCTATCCGATTCTTATCCCCATCTTCGTCTCGTTATCGCTGTCCAACCAT CTCCCGCCACTTATCATGCCTAATATCATCCTCAGCCTCTCCTCTTTACCAACGCCTGTTATACCGTTCCAGAAC CGGGCGAATGGATTTGATAACCTCCATTGGATGGTCTCTATGATTCCCATCCTCGTTTCCGAACATTTCTCCTCG GACCATACTGTACCCAAACCATTGACGCTTCGCGGGCTCGACGCAGAGTCTTTAATACTTCTTTTCCCTTTGCAT CAAGCGTTGATACCCACTTTAGACTTTTTGTTGACGACCAGCATTCTTCCCGCTGAGCTGCAGCTTTTGACAACT GCTTTGATCAACTTGTACTTGTTTGCGGCCTCTCCCCAGATGGAGATACTCAAAGCCTTGTTATGGCTTGGAGGC ATGTGTTTGTTTGCTTCTTGTCGACATATACTGCGTTGGGAGGTTTCTTTGGCTAGAATTCCCAGCTGGAAATTC CGCCGCGCCCCACATGGCGCGCAATCTCCCCGCAAATTCTTGAACATGATGGACCATCGAATTTGTGAGAAGTTG AGTAGAACGGCGCACGTTCCATCGGACGATGCTACATCGGACAGCGATGGCCCTAATGGCTTCATGTTTTCAAGG CCGCGCAAGACGAAGACCATGCAGGATAATCGCTCTTTCCGCCCATCGGCAGAGCCGACATCTGCAGTCGACCAG GTCACGACGGAGGCGATTTTCGAGAAGCATGCTCGTATTGTGCATCGACGACGCCATACCATATCTACATTCGAC GAAGTCGTTCGAGAGGAACGTGTCCACACCACCCCCGGTGGTAGACGCAAGAAAATGATGGGTCCTGGCCTGGCC TCCTTCCTCTCGCTCACTTCAGCCCAGGCACAGGTCCGAAAATGGTTGTACGCATTTTACGTGTATGTTCTGTCG CTGATTATCATTCTTGGGCCTATTCGAAAATACGTAGCAGAGCACGCACTACAAGGCCAGGATCCGTTCGGTTGG GCTATCGGCTACCTGCTGGGAAACTTCTCGAAAATTCGCTTTTGGGTGCTTATGTTGAACCTTGAATACTGGATC GAACTGCCACCCCGCCCTGATGCAGATAATCTGAGTGCCTCCTGCTTCCTTGGGTCGGTCGAACATATTCGCCAG GCTACTTTTGGAGCTGCCGTGACCCGTCTACTACTCAGTGGATACTGCGCGTTGGTACTACTGACAGGCCTGGCT ATTGTGGTTAAGCTCAGCTCTGTTGCCGAGGTTGATACGCGCCGCAAGATTTTCCACGGCATGATGGTGGTTATG TTCCTTCCCGCGATTTTTGTGGATCCAGCCTTCTGCGCCATGGCGCTAGCCTTGGTCCTCTCCATATTCCTTCTA CTTGACCTATTCCGCGCATCTCAACTACCTCCAATTTCGCGACCGCTTACCTACTTTCTGGCCCCGTATGTTGAC GGCCGTGATCACCGTGGCCCGGTCATCATCTCGCATATCTTCTTGCTAATTGGATGTTCGATACCCCTTTGGCTG TCGCTTTCCGATCTCCCTCGGACTGGCCTGGGCCCCTGGGCCGGTTGGGAGGTACCGTCACGGGATGTAAGCATG GCCAGCGGAGTTATCTGTGTTGGCATGGGCGACGCGGCTGCATCCCTCATTGGCCGACGGTACGGCCGGCTGAAA TGGTTCTGGGGAGGCGGCAAATCACTTGAAGGCAGCATTGCTTTCGTTGTAGCTGTCACCTGCGGGCTGATCGCG GTTCGTGCCTGGTTGGTGCTCGGTGGCTGGCCCGTGTCTGGGCTCGAATCGGCTGCAGTGACAGCTTTCTCCGCT CACTTCTGGGCCTGGACTTTGCTCAAGGCGGTTCTGGCGGCAGCCGGAACGAGCGCCACCGAAGCAATCCTTACC GGTTGTAATGACAATGTCGTGGTCCCAGTGGTGTTATGGCTGCTGGTGCGGGGTCTTGGCGTCTGA |