© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g5000.t1 |
| Gene name | |
| Location | scaffold_11:283687..285591 |
| Strand | - |
| Gene length (bp) | 1904 |
| Transcript length (bp) | 1623 |
| Coding sequence length (bp) | 1623 |
| Protein length (aa) | 541 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.2E-93 | 53 | 487 |
| PF00324 | AA_permease | Amino acid permease | 3.6E-18 | 66 | 458 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 89 | 111 | 22 |
| 3 | 132 | 154 | 22 |
| 4 | 174 | 195 | 21 |
| 5 | 202 | 224 | 22 |
| 6 | 244 | 266 | 22 |
| 7 | 279 | 301 | 22 |
| 8 | 331 | 350 | 19 |
| 9 | 374 | 396 | 22 |
| 10 | 406 | 428 | 22 |
| 11 | 441 | 463 | 22 |
| 12 | 483 | 505 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g5000.t1 MAERVDPVVEASDKSPVFATKSAGDDGLRRADGISGLYEGNIFEATPDSRRHIGVFSAALLIFNRVIGTGIFATP STILALTGSVGLSLFMWVIGTVIALAGTAVYLEWGTAIPRNGGEKNYLEYVYTKPKFLATAMFAAYAVLLGWAAS NSVVFGQYILNAAEVEVGRWNQRGVGMACLTAAFLIHSVALKWGIRLQNALGVIKLIVVVFIIVSGWAALGGHTK AETPHNFKNAFEGTKGSGYGIVMSLYNVIWSFIGYSNANYALSETKNPTRTLKIAAPVAIISVGILYMFVNIAYF AAVSKEEMLGSGSIVAAVFFRNMFGKQAERAMSVLVALSAFGNVLSVIFSQGRIVQELGREGVLPFSKIWASNWP FHSPAAGLLEHYIVSVIIMLAPPPGDAYNFLLNLISYPLSIVNFFVAAGLVHIYLTKEKNYPNWKPGIRATLPVT IFFMLSNLYLAVAPYVPPSDGQNVYEQLPYYLHCVVALALFAAGAIYYVVWAVLLPRIGKYVLVKESVVDADGWS RSVFTRLPQAEAVRS* |
| Coding | >Pro_DTO377G3_2|g5000.t1 ATGGCTGAACGGGTTGACCCTGTTGTTGAGGCTTCTGATAAGTCGCCAGTATTTGCTACAAAGTCGGCCGGAGAT GACGGCCTCCGGCGAGCAGATGGTATTTCGGGATTGTATGAAGGAAATATCTTCGAGGCAACCCCCGACAGCCGT CGTCACATTGGAGTATTCAGTGCTGCCCTCTTAATCTTTAACCGGGTTATTGGTACGGGTATCTTTGCCACACCA AGCACTATCCTTGCATTGACTGGCAGTGTTGGTCTCTCATTGTTCATGTGGGTTATCGGCACTGTAATTGCTCTA GCAGGGACGGCAGTATACCTAGAATGGGGTACTGCAATTCCAAGAAATGGAGGCGAGAAGAACTACCTCGAATAC GTTTATACCAAGCCCAAGTTCCTGGCCACTGCCATGTTCGCCGCCTATGCAGTATTACTCGGATGGGCTGCAAGT AACAGCGTTGTTTTCGGTCAATATATCCTCAACGCAGCAGAAGTTGAGGTTGGACGATGGAACCAGCGTGGAGTT GGCATGGCCTGCCTCACTGCCGCCTTTCTTATCCATTCCGTTGCCCTGAAATGGGGTATTCGGCTTCAGAATGCG CTTGGTGTTATCAAGTTGATTGTCGTCGTGTTTATCATTGTTTCTGGTTGGGCGGCACTTGGTGGCCATACAAAG GCTGAGACGCCGCATAACTTCAAAAATGCGTTTGAAGGCACCAAGGGAAGTGGATATGGCATTGTCATGTCGTTG TACAACGTTATCTGGTCCTTTATTGGCTATTCAAATGCCAACTATGCCTTGAGCGAGACAAAGAACCCAACCCGT ACCTTGAAGATTGCAGCCCCTGTTGCTATCATATCTGTTGGCATTTTGTATATGTTTGTCAACATCGCCTATTTT GCCGCTGTATCGAAAGAAGAAATGCTCGGGTCTGGCAGCATTGTCGCCGCTGTGTTCTTCAGGAACATGTTCGGC AAACAGGCCGAAAGAGCTATGTCGGTCTTGGTGGCTCTCTCTGCCTTTGGCAATGTGTTGTCCGTCATCTTCTCA CAAGGGCGAATTGTCCAAGAGCTCGGCCGTGAAGGTGTTTTGCCCTTTTCCAAGATCTGGGCCAGCAACTGGCCT TTCCACTCGCCAGCCGCTGGCTTGCTTGAACACTATATCGTCTCGGTCATTATCATGCTCGCCCCCCCTCCCGGT GACGCATACAACTTCCTCCTCAATCTCATCTCTTACCCCCTTTCCATTGTCAACTTCTTCGTGGCCGCTGGTCTC GTTCATATCTACCTCACCAAAGAGAAGAACTACCCCAACTGGAAGCCCGGTATTCGTGCTACACTACCAGTCACC ATCTTCTTCATGCTGTCAAACCTGTATCTCGCGGTTGCGCCATATGTGCCCCCAAGCGATGGCCAAAATGTGTAC GAACAGCTACCTTACTACCTGCACTGTGTGGTAGCCCTTGCGCTTTTCGCAGCAGGAGCAATCTACTACGTTGTC TGGGCGGTGTTGTTGCCTCGGATTGGTAAGTATGTGCTTGTCAAGGAGTCCGTCGTGGATGCGGATGGTTGGTCT CGAAGTGTTTTCACACGACTACCACAGGCAGAGGCAGTGCGTTCTTAG |
| Transcript | >Pro_DTO377G3_2|g5000.t1 ATGGCTGAACGGGTTGACCCTGTTGTTGAGGCTTCTGATAAGTCGCCAGTATTTGCTACAAAGTCGGCCGGAGAT GACGGCCTCCGGCGAGCAGATGGTATTTCGGGATTGTATGAAGGAAATATCTTCGAGGCAACCCCCGACAGCCGT CGTCACATTGGAGTATTCAGTGCTGCCCTCTTAATCTTTAACCGGGTTATTGGTACGGGTATCTTTGCCACACCA AGCACTATCCTTGCATTGACTGGCAGTGTTGGTCTCTCATTGTTCATGTGGGTTATCGGCACTGTAATTGCTCTA GCAGGGACGGCAGTATACCTAGAATGGGGTACTGCAATTCCAAGAAATGGAGGCGAGAAGAACTACCTCGAATAC GTTTATACCAAGCCCAAGTTCCTGGCCACTGCCATGTTCGCCGCCTATGCAGTATTACTCGGATGGGCTGCAAGT AACAGCGTTGTTTTCGGTCAATATATCCTCAACGCAGCAGAAGTTGAGGTTGGACGATGGAACCAGCGTGGAGTT GGCATGGCCTGCCTCACTGCCGCCTTTCTTATCCATTCCGTTGCCCTGAAATGGGGTATTCGGCTTCAGAATGCG CTTGGTGTTATCAAGTTGATTGTCGTCGTGTTTATCATTGTTTCTGGTTGGGCGGCACTTGGTGGCCATACAAAG GCTGAGACGCCGCATAACTTCAAAAATGCGTTTGAAGGCACCAAGGGAAGTGGATATGGCATTGTCATGTCGTTG TACAACGTTATCTGGTCCTTTATTGGCTATTCAAATGCCAACTATGCCTTGAGCGAGACAAAGAACCCAACCCGT ACCTTGAAGATTGCAGCCCCTGTTGCTATCATATCTGTTGGCATTTTGTATATGTTTGTCAACATCGCCTATTTT GCCGCTGTATCGAAAGAAGAAATGCTCGGGTCTGGCAGCATTGTCGCCGCTGTGTTCTTCAGGAACATGTTCGGC AAACAGGCCGAAAGAGCTATGTCGGTCTTGGTGGCTCTCTCTGCCTTTGGCAATGTGTTGTCCGTCATCTTCTCA CAAGGGCGAATTGTCCAAGAGCTCGGCCGTGAAGGTGTTTTGCCCTTTTCCAAGATCTGGGCCAGCAACTGGCCT TTCCACTCGCCAGCCGCTGGCTTGCTTGAACACTATATCGTCTCGGTCATTATCATGCTCGCCCCCCCTCCCGGT GACGCATACAACTTCCTCCTCAATCTCATCTCTTACCCCCTTTCCATTGTCAACTTCTTCGTGGCCGCTGGTCTC GTTCATATCTACCTCACCAAAGAGAAGAACTACCCCAACTGGAAGCCCGGTATTCGTGCTACACTACCAGTCACC ATCTTCTTCATGCTGTCAAACCTGTATCTCGCGGTTGCGCCATATGTGCCCCCAAGCGATGGCCAAAATGTGTAC GAACAGCTACCTTACTACCTGCACTGTGTGGTAGCCCTTGCGCTTTTCGCAGCAGGAGCAATCTACTACGTTGTC TGGGCGGTGTTGTTGCCTCGGATTGGTAAGTATGTGCTTGTCAAGGAGTCCGTCGTGGATGCGGATGGTTGGTCT CGAAGTGTTTTCACACGACTACCACAGGCAGAGGCAGTGCGTTCTTAG |
| Gene | >Pro_DTO377G3_2|g5000.t1 ATGGCTGAACGGGTTGACCCTGTTGTTGAGGCTTCTGATAAGTCGCCAGTATTTGCTACAAAGTCGGCCGGAGAT GACGGCCTCCGGCGAGCAGATGGTATTTCGGGATTGTGTATGTTCTTCTCTATATCGAGTGATGGCTGCGTGACA CCTCTAATCGTTCTGCGTTCAGATGAAGGAAATATCTTCGAGGCAACCCCCGACAGCCGTCGTCACATTGGAGTA TTCAGTGCTGCCCTCTTAATCTTTAACCGGGTTATTGGTACGGGTATCTTTGCCACACCAAGCACTATCCTTGCA TTGACTGGCAGTGTTGGTCTCTCATTGTTCATGTGGGTTATCGGCACTGTAATTGCTCTAGCAGGGACGGCAGTA TACCTAGAATGGGGTACTGCAATTCCAAGGTATGTTATTGAACGAAAGTATCAGAGAGAAGACTTGACTGATTAA TCTGGCTGTATAGAAATGGAGGCGAGAAGAACTACCTCGAATACGTTTATACCAAGCCCAAGTTCCTGGCCACTG CCATGTTCGCCGCCTATGCAGTATTACTCGGATGGGCTGCAAGTAACAGCGTTGTTTTCGGTCAATATATCCTCA ACGCAGCAGAAGTTGAGGTTGGACGATGGAACCAGCGTGGAGTTGGCATGGCCTGCCTCACTGCCGCCTTTCTTA TCCATTCCGTTGCCCTGAAATGGGGTATTCGGCTTCAGAATGCGCTTGGTGTTATCAAGTTGATTGTCGTCGTGT TTATCATTGTTTCTGGTTGGGCGGCACTTGGTGGCCATACAAAGGCTGAGACGCCGCATAACTTCAAAAATGCGT TTGAAGGCACCAAGGGAAGTGGATATGGCATTGTCATGTCGTTGTACAACGTTATCTGGTCCTTTATTGGCTATT CAAATGCCAACTATGTAAGAACATGAACATATGAGTTGCGTCTAGATCACATTGCTAATTACATTTACAGGCCTT GAGCGAGACAAAGAACCCAACCCGTACCTTGAAGATTGCAGCCCCTGTTGCTATCATATCTGTTGGCATTTTGTA TATGTTTGTCAACATCGCCTATTTTGCCGCTGTATCGAAAGAAGAAATGCTCGGGTCTGGCAGCATTGTCGCCGC TGTGTTCTTCAGGAACATGTTCGGCAAACAGGCCGAAAGAGCTATGTCGGTCTTGGTGGCTCTCTCTGCCTTTGG CAATGTGTTGTCCGTCATCTTCTCACAAGGGCGAAGTATGTATTCTCACATTCACATTTGAACGGTATACTAATA CGACTTCGATAACAGTTGTCCAAGAGCTCGGCCGTGAAGGTGTTTTGCCCTTTTCCAAGATCTGGGCCAGCAACT GGCCTTTCCACTCGCCAGCCGCTGGCTTGCTTGAACACTATATCGTCTCGGTCATTATCATGCTCGCCCCCCCTC CCGGTGACGCATACAACTTCCTCCTCAAGTATGTGATTTCTGAAGACACCGCAAGATCAATACTGACCAATTCTC CCAGTCTCATCTCTTACCCCCTTTCCATTGTCAACTTCTTCGTGGCCGCTGGTCTCGTTCATATCTACCTCACCA AAGAGAAGAACTACCCCAACTGGAAGCCCGGTATTCGTGCTACACTACCAGTCACCATCTTCTTCATGCTGTCAA ACCTGTATCTCGCGGTTGCGCCATATGTGCCCCCAAGCGATGGCCAAAATGTGTACGAACAGCTACCTTACTACC TGCACTGTGTGGTAGCCCTTGCGCTTTTCGCAGCAGGAGCAATCTACTACGTTGTCTGGGCGGTGTTGTTGCCTC GGATTGGTAAGTATGTGCTTGTCAAGGAGTCCGTCGTGGATGCGGATGGTTGGTCTCGAAGTGTTTTCACACGAC TACCACAGGCAGAGGCAGTGCGTTCTTAG |