© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4990.t1 |
| Gene name | |
| Location | scaffold_11:260452..262135 |
| Strand | - |
| Gene length (bp) | 1683 |
| Transcript length (bp) | 1488 |
| Coding sequence length (bp) | 1488 |
| Protein length (aa) | 496 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.4E-29 | 46 | 450 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.8E-14 | 53 | 402 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 55 | 72 | 17 |
| 3 | 85 | 102 | 17 |
| 4 | 112 | 134 | 22 |
| 5 | 147 | 169 | 22 |
| 6 | 184 | 206 | 22 |
| 7 | 255 | 277 | 22 |
| 8 | 292 | 314 | 22 |
| 9 | 326 | 343 | 17 |
| 10 | 353 | 375 | 22 |
| 11 | 388 | 410 | 22 |
| 12 | 414 | 436 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4990.t1 MASFGAKLRFVATAGVGFFADGYLNLTIGLVVPILGYLYFQDDKVPSVDSDIMKGGLSLGMVVGQLLFGILSDVC GRHTVYGKELLLTIFGTLLVVLLPWNGMSAQSVTAWVAIFRVVTGVGIGADYPLSSSLAAEKSPFGSRAIQVLTV FSNIGLGNISASIVFLILLKAFKGAIANNISHLEWVWRLLLGIGIVPALFTLYARLTITETTPYKQYVCDDAAGQ KRTFKKQWEEFREYFSHWQHAKVLFATSASWFLYDIAYYGINLNQSIILTRIGYAKGATPWITLYHTAVGNIIIQ VAGYLPGFYVGIFLPDCIGRVRQQFWTSIMVCILYAIWAGISTQSANTPTAGLMVIFALSQFLMTVGPNCTTFLL PAEVFPTRVRGTAHGISAASGKCGAILTAFAFGTVEDAIGLEGVLGLFSGIMLLTALVTLLIPETKNHTLEGIEN NGLYRTSGAVTDLPNSSCITYVNVEAGNGEAKTSFGDDQVKKLAV* |
| Coding | >Pro_DTO377G3_2|g4990.t1 ATGGCATCGTTCGGAGCCAAATTGAGGTTTGTAGCCACTGCAGGCGTTGGATTCTTCGCAGATGGCTATCTTAAC CTGACAATTGGACTTGTGGTCCCAATTCTGGGTTACCTATACTTCCAAGATGACAAGGTACCGTCAGTCGACAGC GACATCATGAAAGGTGGTCTGAGCCTGGGAATGGTGGTTGGCCAGCTTCTTTTTGGAATTCTGAGTGATGTTTGT GGTCGCCACACCGTTTACGGCAAAGAACTCCTCCTCACCATATTTGGAACCCTATTGGTAGTCTTGTTGCCTTGG AACGGGATGTCGGCCCAGTCTGTGACGGCATGGGTTGCAATTTTTCGTGTCGTGACCGGAGTTGGAATTGGTGCT GATTATCCATTGTCTTCATCTTTGGCGGCAGAAAAATCACCGTTTGGCTCCCGTGCTATTCAAGTGTTGACTGTC TTTTCGAATATCGGCCTCGGCAATATTTCAGCCAGCATTGTGTTTCTGATCTTGCTCAAGGCATTCAAAGGGGCG ATAGCCAACAACATAAGCCATCTCGAATGGGTCTGGCGTTTGCTATTGGGCATTGGAATTGTGCCAGCGTTGTTC ACTCTTTATGCCCGGCTAACGATCACGGAGACAACACCTTACAAGCAATATGTCTGCGATGACGCTGCCGGGCAG AAACGCACATTCAAGAAGCAGTGGGAAGAATTTCGCGAGTACTTCAGTCACTGGCAACATGCCAAAGTGCTGTTC GCAACATCAGCCTCCTGGTTCTTGTACGACATCGCATACTACGGTATCAATCTCAACCAGAGCATTATCCTGACA AGAATCGGTTATGCCAAGGGAGCAACACCATGGATCACCCTGTACCACACCGCTGTGGGCAATATAATCATCCAG GTAGCAGGGTATCTCCCCGGATTCTACGTCGGAATATTCCTTCCTGATTGCATCGGTCGTGTGCGCCAACAATTC TGGACCAGTATCATGGTGTGTATACTTTATGCCATATGGGCTGGAATCAGCACACAGAGCGCAAACACCCCGACA GCTGGCTTGATGGTTATCTTTGCCCTCTCGCAGTTTTTAATGACGGTTGGTCCCAACTGCACGACGTTCCTGCTT CCCGCCGAAGTGTTCCCAACACGTGTTCGAGGCACAGCACACGGCATATCTGCTGCTTCTGGAAAATGCGGTGCA ATTCTAACTGCATTTGCTTTCGGCACTGTTGAAGATGCAATCGGCTTGGAGGGCGTCCTTGGTTTGTTCTCGGGG ATCATGCTGCTCACTGCTCTTGTAACCTTGCTGATACCCGAGACCAAGAATCATACTCTTGAGGGCATTGAGAAC AATGGGCTCTATAGAACAAGCGGAGCTGTCACCGACCTTCCAAATTCTAGTTGTATTACCTATGTCAACGTTGAA GCTGGGAACGGGGAGGCAAAGACCAGCTTTGGAGATGATCAAGTTAAGAAGTTAGCTGTATAG |
| Transcript | >Pro_DTO377G3_2|g4990.t1 ATGGCATCGTTCGGAGCCAAATTGAGGTTTGTAGCCACTGCAGGCGTTGGATTCTTCGCAGATGGCTATCTTAAC CTGACAATTGGACTTGTGGTCCCAATTCTGGGTTACCTATACTTCCAAGATGACAAGGTACCGTCAGTCGACAGC GACATCATGAAAGGTGGTCTGAGCCTGGGAATGGTGGTTGGCCAGCTTCTTTTTGGAATTCTGAGTGATGTTTGT GGTCGCCACACCGTTTACGGCAAAGAACTCCTCCTCACCATATTTGGAACCCTATTGGTAGTCTTGTTGCCTTGG AACGGGATGTCGGCCCAGTCTGTGACGGCATGGGTTGCAATTTTTCGTGTCGTGACCGGAGTTGGAATTGGTGCT GATTATCCATTGTCTTCATCTTTGGCGGCAGAAAAATCACCGTTTGGCTCCCGTGCTATTCAAGTGTTGACTGTC TTTTCGAATATCGGCCTCGGCAATATTTCAGCCAGCATTGTGTTTCTGATCTTGCTCAAGGCATTCAAAGGGGCG ATAGCCAACAACATAAGCCATCTCGAATGGGTCTGGCGTTTGCTATTGGGCATTGGAATTGTGCCAGCGTTGTTC ACTCTTTATGCCCGGCTAACGATCACGGAGACAACACCTTACAAGCAATATGTCTGCGATGACGCTGCCGGGCAG AAACGCACATTCAAGAAGCAGTGGGAAGAATTTCGCGAGTACTTCAGTCACTGGCAACATGCCAAAGTGCTGTTC GCAACATCAGCCTCCTGGTTCTTGTACGACATCGCATACTACGGTATCAATCTCAACCAGAGCATTATCCTGACA AGAATCGGTTATGCCAAGGGAGCAACACCATGGATCACCCTGTACCACACCGCTGTGGGCAATATAATCATCCAG GTAGCAGGGTATCTCCCCGGATTCTACGTCGGAATATTCCTTCCTGATTGCATCGGTCGTGTGCGCCAACAATTC TGGACCAGTATCATGGTGTGTATACTTTATGCCATATGGGCTGGAATCAGCACACAGAGCGCAAACACCCCGACA GCTGGCTTGATGGTTATCTTTGCCCTCTCGCAGTTTTTAATGACGGTTGGTCCCAACTGCACGACGTTCCTGCTT CCCGCCGAAGTGTTCCCAACACGTGTTCGAGGCACAGCACACGGCATATCTGCTGCTTCTGGAAAATGCGGTGCA ATTCTAACTGCATTTGCTTTCGGCACTGTTGAAGATGCAATCGGCTTGGAGGGCGTCCTTGGTTTGTTCTCGGGG ATCATGCTGCTCACTGCTCTTGTAACCTTGCTGATACCCGAGACCAAGAATCATACTCTTGAGGGCATTGAGAAC AATGGGCTCTATAGAACAAGCGGAGCTGTCACCGACCTTCCAAATTCTAGTTGTATTACCTATGTCAACGTTGAA GCTGGGAACGGGGAGGCAAAGACCAGCTTTGGAGATGATCAAGTTAAGAAGTTAGCTGTATAG |
| Gene | >Pro_DTO377G3_2|g4990.t1 ATGGCATCGTTCGGAGCCAAATTGAGGTTTGTAGCCACTGCAGGCGTTGGATTCTTCGCAGATGGCTATCTTAAC CTGACAATTGGACTTGGTGAGTGGCTTCAATTAATCAATGAGGCCGAAGACTAATGTTACACAGTGGTCCCAATT CTGGGTTACCTATACTTCCAAGATGACAAGGTACCGTCAGTCGACAGCGACATCATGAAAGGTGGTCTGAGCCTG GGAATGGTGGTTGGCCAGCTTCTTTTTGGAATTCTGAGTGATGTTTGTGGTCGCCACACCGTTTACGGCAAAGAA CTCCTCCTCACCATATTTGGAACCCTATTGGTAGTCTTGTTGCCTTGGAACGGGATGTCGGCCCAGTCTGTGACG GCATGGGTTGCAATTTTTCGTGTCGTGACCGGAGTTGGAATTGGTGCTGGTAAGTCTTTTTCCTTTGGAATAGAA GCATGGATCTAACTCGAGAAAGATTATCCATTGTCTTCATCTTTGGCGGCAGAAAAATCACCGTTTGGCTCCCGT GCTATTCAAGTGTTGACTGTCTTTTCGAATATCGGCCTCGGCAATATTTCAGCCAGCATTGTGTTTCTGATCTTG CTCAAGGCATTCAAAGGGGCGATAGCCAACAACATAAGCCATCTCGAATGGGTCTGGCGTTTGCTATTGGGCATT GGAATTGTGCCAGCGTTGTTCACTCTTTATGCCCGGCTAACGATCACGGAGACAACACCTTACAAGCAATGTGAG AGTGCCTCGGTCTTGTGCTTTGAAGATAGCTAATACTGTTTAGATGTCTGCGATGACGCTGCCGGGCAGAAACGC ACATTCAAGAAGCAGTGGGAAGAATTTCGCGAGTACTTCAGTCACTGGCAACATGCCAAAGTGCTGTTCGCAACA TCAGCCTCCTGGTTCTTGTAGTAAGTTAGGTGGACTTGGAAAAAGGAAAAGCCGCAAACTAACGCACACAGCGAC ATCGCATACTACGGTATCAATCTCAACCAGAGCATTATCCTGACAAGAATCGGTTATGCCAAGGGAGCAACACCA TGGATCACCCTGTACCACACCGCTGTGGGCAATATAATCATCCAGGTAGCAGGGTATCTCCCCGGATTCTACGTC GGAATATTCCTTCCTGATTGCATCGGTCGTGTGCGCCAACAATTCTGGACCAGTATCATGGTGTGTATACTTTAT GCCATATGGGCTGGAATCAGCACACAGAGCGCAAACACCCCGACAGCTGGCTTGATGGTTATCTTTGCCCTCTCG CAGTTTTTAATGACGGTTGGTCCCAACTGCACGACGTTCCTGCTTCCCGCCGAAGTGTTCCCAACACGTGTTCGA GGCACAGCACACGGCATATCTGCTGCTTCTGGAAAATGCGGTGCAATTCTAACTGCATTTGCTTTCGGCACTGTT GAAGATGCAATCGGCTTGGAGGGCGTCCTTGGTTTGTTCTCGGGGATCATGCTGCTCACTGCTCTTGTAACCTTG CTGATACCCGAGACCAAGAATCATACTCTTGAGGGCATTGAGAACAATGGGCTCTATAGAACAAGCGGAGCTGTC ACCGACCTTCCAAATTCTAGTTGTATTACCTATGTCAACGTTGAAGCTGGGAACGGGGAGGCAAAGACCAGCTTT GGAGATGATCAAGTTAAGAAGTTAGCTGTATAG |