Protein ID | Pro_DTO377G3_2|g4987.t1 |
Gene name | |
Location | scaffold_11:240445..242793 |
Strand | + |
Gene length (bp) | 2348 |
Transcript length (bp) | 1956 |
Coding sequence length (bp) | 1956 |
Protein length (aa) | 652 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00790 | VHS | VHS domain | 4.6E-43 | 15 | 157 |
PF02883 | Alpha_adaptinC2 | Adaptin C-terminal domain | 1.3E-24 | 541 | 645 |
PF03127 | GAT | GAT domain | 5.6E-22 | 240 | 316 |
PF18308 | GGA_N-GAT | N-terminal extension of GAT domain | 5.1E-06 | 189 | 219 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035091 | phosphatidylinositol binding | Yes |
GO:0016192 | vesicle-mediated transport | Yes |
GO:0043130 | ubiquitin binding | Yes |
GO:0006886 | intracellular protein transport | Yes |
GO:0005488 | binding | No |
GO:0046907 | intracellular transport | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0015031 | protein transport | No |
GO:0051234 | establishment of localization | No |
GO:0005543 | phospholipid binding | No |
GO:0051641 | cellular localization | No |
GO:0008289 | lipid binding | No |
GO:0045184 | establishment of protein localization | No |
GO:0005515 | protein binding | No |
GO:0071702 | organic substance transport | No |
GO:0003674 | molecular_function | No |
GO:0070727 | cellular macromolecule localization | No |
GO:0051649 | establishment of localization in cell | No |
GO:0032182 | ubiquitin-like protein binding | No |
GO:0051179 | localization | No |
GO:0008104 | protein localization | No |
GO:0071705 | nitrogen compound transport | No |
GO:0033036 | macromolecule localization | No |
GO:0009987 | cellular process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4987.t1 MAARDRFGVYAEPGASPLQRAIRNACDPQNYEPNLALNLEVADLINSKKGNAPREAALDIVHLINSRNQNVALLA LALLDIAVKNCGYPFHLQIGTKEFLNELVRRFPERPPIRPSRVQHRILESIEEWRQTICQTSRYKDDLGFIRDMH RLLLYKGYMFPEVRREDAAVLNPSDNLRSADEMEEEEREAQSAKLQELIRRGTPADLQEANRLMKVMAGFDNRHK TDYRAKAAEEVVKVQQKAKILEEMLQNQKPGEPLPEGEVFEELASALQSAHPKIQKMCEEESDDPEAVHKLLEIN DSIHRTIERYKLVKKGDLDAASQIPKGTLGTTTGVSTNANNELSLIDFDPEPEPSSNGNEAGPSHGGSSLENDLL GLSLGGQTPSPGGGISLGPSMNFASMPASPTPPVPSQPQQHAPTAFKPNYDILASLNSSRPVSQSPTPVMGVSPQ AQSRATPPPAADPFASLVSASPRAASGPFQPPAQSQPAPAPSSLLDLMGGTSPSPQPPRQAAPVEDDEWDFASAL PASNALPSTNKIQVLNSQLQVDFAARRVPTQPRQIHVVAIFSNTTSQRIGDLHFQVAVEKSYTLQLRPQSGRDIA PQQQNGVQQEMLIDGVDAGKGNSVKIRFKVSYKLGGEAREEQGMVPPLGIA* |
Coding | >Pro_DTO377G3_2|g4987.t1 ATGGCGGCCAGGGACCGCTTCGGGGTCTACGCTGAGCCAGGCGCTTCGCCGTTGCAGCGGGCAATCCGAAATGCC TGCGATCCTCAAAACTACGAACCGAACCTGGCCCTGAACCTTGAAGTTGCGGATCTAATCAACTCCAAGAAAGGC AATGCGCCGCGAGAAGCCGCATTGGATATAGTTCATCTCATCAATTCCCGGAATCAGAATGTCGCATTGTTGGCG TTGGCGCTACTCGATATTGCCGTCAAGAACTGCGGATATCCATTCCATCTCCAAATCGGTACAAAGGAGTTTCTG AATGAATTGGTTCGCAGGTTCCCCGAGCGGCCACCCATACGGCCCTCCAGGGTCCAACACCGCATTTTGGAGTCG ATCGAGGAGTGGCGCCAGACTATCTGCCAGACATCGCGCTATAAGGATGACCTAGGCTTCATTCGGGACATGCAC CGTCTGTTGCTTTATAAGGGATATATGTTCCCGGAGGTCCGTCGAGAAGATGCTGCGGTCTTGAATCCAAGTGAT AACCTCCGCTCAGCAGATGAGATGGAAGAGGAAGAGAGGGAAGCGCAGTCTGCCAAACTCCAGGAGTTGATTCGG AGAGGCACTCCCGCCGATCTACAGGAAGCGAACCGGCTCATGAAGGTTATGGCAGGATTCGACAATCGGCATAAA ACCGATTATCGAGCAAAGGCTGCGGAGGAGGTTGTTAAGGTGCAACAAAAAGCCAAGATTCTGGAAGAGATGCTG CAGAATCAAAAGCCCGGGGAACCTCTCCCAGAAGGCGAAGTTTTCGAGGAACTTGCGAGTGCTTTGCAAAGCGCT CACCCCAAAATCCAGAAAATGTGCGAGGAAGAATCGGATGATCCCGAGGCCGTCCACAAGCTATTGGAGATCAAC GACAGCATACATCGCACAATCGAGCGGTATAAGCTAGTTAAGAAAGGTGATCTGGATGCTGCATCTCAGATTCCC AAGGGTACACTGGGCACCACGACTGGAGTTTCAACAAATGCAAACAACGAGCTCTCTCTTATCGATTTCGACCCG GAGCCTGAACCCAGCTCCAACGGTAACGAGGCCGGGCCATCCCACGGTGGGAGCTCCTTGGAGAATGATCTACTC GGTCTTTCATTAGGCGGACAAACTCCCTCCCCCGGAGGTGGTATCTCTCTCGGACCTTCCATGAACTTCGCGTCC ATGCCAGCAAGCCCAACGCCGCCTGTTCCATCACAACCTCAGCAGCATGCGCCAACAGCCTTCAAACCCAATTAT GATATCCTTGCTTCTCTGAACAGTTCGCGACCTGTCTCTCAATCTCCCACGCCCGTCATGGGGGTCTCGCCCCAA GCCCAGTCCAGAGCGACCCCGCCACCAGCGGCTGATCCATTTGCATCGCTCGTCTCTGCTAGCCCACGGGCAGCA TCTGGTCCCTTTCAACCACCGGCGCAAAGCCAACCTGCTCCCGCTCCATCGTCATTGCTTGACCTGATGGGAGGC ACGAGTCCGTCTCCTCAACCGCCGCGGCAGGCCGCTCCAGTGGAAGATGATGAGTGGGATTTCGCATCCGCATTG CCAGCGAGCAATGCGCTTCCATCGACCAATAAGATTCAAGTCCTTAACTCTCAGCTCCAAGTTGACTTCGCTGCG CGCCGGGTGCCGACGCAGCCACGCCAGATCCACGTTGTAGCTATATTTTCAAACACAACTAGTCAGCGTATTGGA GATCTCCATTTCCAGGTCGCTGTGGAGAAGTCCTACACGCTACAGCTTCGGCCGCAATCAGGCCGAGATATTGCA CCCCAGCAGCAAAATGGTGTCCAACAGGAGATGCTCATTGACGGAGTTGATGCTGGGAAGGGCAACTCGGTCAAG ATTCGATTCAAGGTGTCTTACAAGCTTGGAGGCGAGGCCCGAGAGGAACAGGGGATGGTGCCGCCGCTGGGAATC GCGTAA |
Transcript | >Pro_DTO377G3_2|g4987.t1 ATGGCGGCCAGGGACCGCTTCGGGGTCTACGCTGAGCCAGGCGCTTCGCCGTTGCAGCGGGCAATCCGAAATGCC TGCGATCCTCAAAACTACGAACCGAACCTGGCCCTGAACCTTGAAGTTGCGGATCTAATCAACTCCAAGAAAGGC AATGCGCCGCGAGAAGCCGCATTGGATATAGTTCATCTCATCAATTCCCGGAATCAGAATGTCGCATTGTTGGCG TTGGCGCTACTCGATATTGCCGTCAAGAACTGCGGATATCCATTCCATCTCCAAATCGGTACAAAGGAGTTTCTG AATGAATTGGTTCGCAGGTTCCCCGAGCGGCCACCCATACGGCCCTCCAGGGTCCAACACCGCATTTTGGAGTCG ATCGAGGAGTGGCGCCAGACTATCTGCCAGACATCGCGCTATAAGGATGACCTAGGCTTCATTCGGGACATGCAC CGTCTGTTGCTTTATAAGGGATATATGTTCCCGGAGGTCCGTCGAGAAGATGCTGCGGTCTTGAATCCAAGTGAT AACCTCCGCTCAGCAGATGAGATGGAAGAGGAAGAGAGGGAAGCGCAGTCTGCCAAACTCCAGGAGTTGATTCGG AGAGGCACTCCCGCCGATCTACAGGAAGCGAACCGGCTCATGAAGGTTATGGCAGGATTCGACAATCGGCATAAA ACCGATTATCGAGCAAAGGCTGCGGAGGAGGTTGTTAAGGTGCAACAAAAAGCCAAGATTCTGGAAGAGATGCTG CAGAATCAAAAGCCCGGGGAACCTCTCCCAGAAGGCGAAGTTTTCGAGGAACTTGCGAGTGCTTTGCAAAGCGCT CACCCCAAAATCCAGAAAATGTGCGAGGAAGAATCGGATGATCCCGAGGCCGTCCACAAGCTATTGGAGATCAAC GACAGCATACATCGCACAATCGAGCGGTATAAGCTAGTTAAGAAAGGTGATCTGGATGCTGCATCTCAGATTCCC AAGGGTACACTGGGCACCACGACTGGAGTTTCAACAAATGCAAACAACGAGCTCTCTCTTATCGATTTCGACCCG GAGCCTGAACCCAGCTCCAACGGTAACGAGGCCGGGCCATCCCACGGTGGGAGCTCCTTGGAGAATGATCTACTC GGTCTTTCATTAGGCGGACAAACTCCCTCCCCCGGAGGTGGTATCTCTCTCGGACCTTCCATGAACTTCGCGTCC ATGCCAGCAAGCCCAACGCCGCCTGTTCCATCACAACCTCAGCAGCATGCGCCAACAGCCTTCAAACCCAATTAT GATATCCTTGCTTCTCTGAACAGTTCGCGACCTGTCTCTCAATCTCCCACGCCCGTCATGGGGGTCTCGCCCCAA GCCCAGTCCAGAGCGACCCCGCCACCAGCGGCTGATCCATTTGCATCGCTCGTCTCTGCTAGCCCACGGGCAGCA TCTGGTCCCTTTCAACCACCGGCGCAAAGCCAACCTGCTCCCGCTCCATCGTCATTGCTTGACCTGATGGGAGGC ACGAGTCCGTCTCCTCAACCGCCGCGGCAGGCCGCTCCAGTGGAAGATGATGAGTGGGATTTCGCATCCGCATTG CCAGCGAGCAATGCGCTTCCATCGACCAATAAGATTCAAGTCCTTAACTCTCAGCTCCAAGTTGACTTCGCTGCG CGCCGGGTGCCGACGCAGCCACGCCAGATCCACGTTGTAGCTATATTTTCAAACACAACTAGTCAGCGTATTGGA GATCTCCATTTCCAGGTCGCTGTGGAGAAGTCCTACACGCTACAGCTTCGGCCGCAATCAGGCCGAGATATTGCA CCCCAGCAGCAAAATGGTGTCCAACAGGAGATGCTCATTGACGGAGTTGATGCTGGGAAGGGCAACTCGGTCAAG ATTCGATTCAAGGTGTCTTACAAGCTTGGAGGCGAGGCCCGAGAGGAACAGGGGATGGTGCCGCCGCTGGGAATC GCGTAA |
Gene | >Pro_DTO377G3_2|g4987.t1 ATGGCGGCCAGGGACCGCTTCGGGGTCTACGCTGAGCCAGGCGCTTCGCCGTTGCAGCGGGCAATCCGTGAGTTC AGTGTTGAAATAAATGTGGCACAAATGATTCATACTGAGACTTATCTACAGGAAATGCCTGCGATCCTCAAAACT ACGAACCGAACCTGGCCCTGAACCTTGAAGTTGCGGATCTAATCAACTCCAAGAAAGGCAATGCGTAAGCGAAAC ACCCAATGTTGTATGGCTCACACTCATGGATTCACTTCTCAGGCCGCGAGAAGCCGCATTGGATATAGTTCATCT CATCAATTCCCGGAATCAGAATGTCGCATTGTTGGCGTTGGCGGTACGTGAGCTCAAGTGACAGCCGAGGCGGGG GAGACTGACAACCGCGGTTTCTAGCTACTCGATATTGCCGTCAAGAACTGCGGATATCCATTCCATCTCCAAATC GGTACAAAGGAGTTTCTGAATGAATTGGTTCGCAGGTTCCCCGAGCGGCCACCCATACGGCCCTCCAGGGTCCAA CACCGCATTTTGGAGTCGATCGAGGAGTGGCGCCAGACTATCTGCCAGACATCGCGCTATAAGGATGACCTAGGC TTCATTCGGGACATGCACCGTCTGTTGCTTTATAAGGGATATATGTTCCCGGAGGTCCGTCGAGAAGATGCTGCG GTCTTGAATCCAAGTGATGTATGTGGCCCCCACATGGTATTTTCGGAGTCAAATTAACGTTGGCTAGAACCTCCG CTCAGCAGATGAGATGGAAGAGGAAGAGAGGGAAGCGCAGTCTGCCAAACTCCAGGAGTTGATTCGGAGAGGCAC TCCCGCCGATCTACAGGAAGCGAACCGGCTCATGAAGGTTATGGCAGGATTCGACAATCGGCATAAAACCGATTA TCGAGCAAAGGCTGCGGAGGAGGTTGTTAAGGTGCAACAAAAAGCCAAGATTCTGGAAGAGATGCTGCAGAATCA AAAGCCCGGGGAACCTCTCCCAGAAGGCGAAGTTTTCGAGGTAGGTGATAAAACGTCCCGTGTGTTGTTTGCCGG TTGATAGGTCTCTGACGATTGTACCAGGAACTTGCGAGTGCTTTGCAAAGCGCTCACCCCAAAATCCAGAAAATG TGCGAGGAAGAATCGGATGATCCCGAGGCCGTCCACAAGCTATTGGAGATCAACGACAGCATACATCGCACAATC GAGCGGTATAAGCTAGTTAAGAAAGGTGATCTGGATGCTGCATCTCAGATTCCCAAGGGTACACTGGGCACCACG ACTGGAGTTTCAACAAATGCAAACAACGAGCTCTCTCTTATCGATTTCGACCCGGAGCCTGAACCCAGCTCCAAC GGTAACGAGGCCGGGCCATCCCACGGTGGGAGCTCCTTGGAGAATGATCTACTCGGTCTTTCATTAGGCGGACAA ACTCCCTCCCCCGGAGGTGGTATCTCTCTCGGACCTTCCAGTAAGTACCTCGGCGCAATATACCCCAAAGCACCA TCACTGACCAATATTAAAGTGAACTTCGCGTCCATGCCAGCAAGCCCAACGCCGCCTGTTCCATCACAACCTCAG CAGCATGCGCCAACAGCCTTCAAACCCAATTATGATATCCTTGCTTCTCTGAACAGTTCGCGACCTGTCTCTCAA TCTCCCACGCCCGTCATGGGGGTCTCGCCCCAAGCCCAGTCCAGAGCGACCCCGCCACCAGCGGCTGATCCATTT GCATCGCTCGTCTCTGCTAGCCCACGGGCAGCATCTGGTCCCTTTCAACCACCGGCGCAAAGCCAACCTGCTCCC GCTCCATCGTCATTGCTTGACCTGATGGGAGGCACGAGTCCGTCTCCTCAACCGCCGCGGCAGGCCGCTCCAGTG GAAGATGATGAGTGGGATTTCGCATCCGCATTGCCAGCGAGCAATGCGCTTCCATCGACCAATAAGATTCAAGTC CTTAACTCTCAGCTCCAAGTTGACTTCGCTGCGCGCCGGGTGCCGACGCAGCCACGCCAGATCCACGTTGTAGCT ATATTTTCAAACACAACTAGTCAGCGTATTGGAGATCTCCATTTCCAGGTCGCTGTGGAGAAGGTAAGCTATTTG CTACTAACGCAGTCCAGTTTTGGATGAGTTTGCTGACGATGAATTAGTCCTACACGCTACAGCTTCGGCCGCAAT CAGGCCGAGATATTGCACCCCAGCAGCAAAATGGTGTCCAACAGGAGATGCTCATTGACGGAGTTGATGCTGGGA AGGGCAACTCGGTCAAGATTCGATTCAAGGTGTCTTACAAGCTTGGAGGCGAGGCCCGAGAGGAACAGGGGATGG TGCCGCCGCTGGGAATCGCGTAA |