Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4980.t1
Gene name
Locationscaffold_11:226256..227088
Strand-
Gene length (bp)832
Transcript length (bp)663
Coding sequence length (bp)663
Protein length (aa) 221

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00037 Fer4 4Fe-4S binding domain 1.3E-05 118 137
PF00037 Fer4 4Fe-4S binding domain 3.5E-08 154 175
PF12838 Fer4_7 4Fe-4S dicluster domain 7.4E-13 120 174
PF13237 Fer4_10 4Fe-4S dicluster domain 3.9E-07 118 171
PF13187 Fer4_9 4Fe-4S dicluster domain 5.2E-08 120 175
PF12800 Fer4_4 4Fe-4S binding domain 2.8E-04 119 134

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4980.t1
MAATRSVARLIAYRRPTPFGLLGSTANFSSSTYRAATPAGPPQAGFRLPPPKHWDQSSESALDKASKYFLMAEIF
RGMYVVLEQFFRPPYTIFYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT
TRYDIDMTKCIYCGYCQESCPVDAIVETSNAEYATETREELLYNKEKLLSNGDKWEPEIAASARADAPYR*
Coding >Pro_DTO377G3_2|g4980.t1
ATGGCCGCCACCCGCTCGGTCGCGAGGCTAATCGCCTACCGTCGGCCGACCCCCTTCGGATTGCTGGGCTCAACC
GCAAACTTCTCTTCTTCGACGTACCGCGCAGCAACCCCAGCGGGACCCCCTCAGGCCGGGTTCCGCCTGCCCCCG
CCCAAGCACTGGGATCAGAGCTCCGAGTCCGCCTTGGACAAGGCCAGCAAATATTTCCTCATGGCAGAGATCTTC
CGCGGCATGTACGTGGTGCTTGAGCAGTTTTTCAGACCACCTTACACCATCTTCTACCCTTTCGAGAAGGGTCCT
ATCTCCCCCCGTTTCCGTGGCGAACACGCCCTCCGTCGCTATCCCACTGGTGAAGAGCGCTGCATTGCTTGCAAG
CTCTGTGAGGCTATCTGCCCGGCCCAAGCTATTACGATTGAGGCCGAAGAGCGTGAGGATGGAAGCCGCCGCACG
ACCCGTTACGATATTGATATGACCAAGTGCATTTACTGTGGCTACTGCCAGGAGAGCTGCCCTGTGGATGCCATC
GTTGAGACTTCCAACGCCGAGTATGCCACCGAGACCCGCGAGGAGCTTCTGTACAACAAGGAGAAGCTCCTCTCC
AATGGTGATAAGTGGGAGCCTGAGATTGCAGCTAGTGCTCGTGCAGATGCTCCCTACCGATAA
Transcript >Pro_DTO377G3_2|g4980.t1
ATGGCCGCCACCCGCTCGGTCGCGAGGCTAATCGCCTACCGTCGGCCGACCCCCTTCGGATTGCTGGGCTCAACC
GCAAACTTCTCTTCTTCGACGTACCGCGCAGCAACCCCAGCGGGACCCCCTCAGGCCGGGTTCCGCCTGCCCCCG
CCCAAGCACTGGGATCAGAGCTCCGAGTCCGCCTTGGACAAGGCCAGCAAATATTTCCTCATGGCAGAGATCTTC
CGCGGCATGTACGTGGTGCTTGAGCAGTTTTTCAGACCACCTTACACCATCTTCTACCCTTTCGAGAAGGGTCCT
ATCTCCCCCCGTTTCCGTGGCGAACACGCCCTCCGTCGCTATCCCACTGGTGAAGAGCGCTGCATTGCTTGCAAG
CTCTGTGAGGCTATCTGCCCGGCCCAAGCTATTACGATTGAGGCCGAAGAGCGTGAGGATGGAAGCCGCCGCACG
ACCCGTTACGATATTGATATGACCAAGTGCATTTACTGTGGCTACTGCCAGGAGAGCTGCCCTGTGGATGCCATC
GTTGAGACTTCCAACGCCGAGTATGCCACCGAGACCCGCGAGGAGCTTCTGTACAACAAGGAGAAGCTCCTCTCC
AATGGTGATAAGTGGGAGCCTGAGATTGCAGCTAGTGCTCGTGCAGATGCTCCCTACCGATAA
Gene >Pro_DTO377G3_2|g4980.t1
ATGGCCGCCACCCGCTCGGTCGCGAGGCTAATCGCCTACCGTCGGCCGACCCCCTTCGGATTGCTGGGCTCAACC
GCAAACTTCTCTTCTTCGACGTACCGCGCAGCAACCCCAGCGGGACCCCCTCAGGCCGGGTTCCGCCTGCCCCCG
CCCAAGCACTGGGATCAGAGCTCCGAGTCCGCCTTGGACAAGGCCAGCAAATATTTCCTCATGGCAGAGATCTTC
CGCGGCATGTACGTGGTGCTTGAGCAGTTTTTCAGACCACCGTAAGTCCTTGTCCCACTCAACCTTGCCGGCGAT
ACGGATCGCAATCCAAAATCAATGGCATCGAAATATATCAACTAATTGCGTTGCAATGTTCCAGTTACACCATCT
TCTACCCTTTCGAGAAGGGTCCTATCTCCCCCCGTTTCCGTGGCGAACACGCCCTCCGTCGCTATCCCACTGGTG
AAGAGCGCTGCATTGCTTGCAAGCTCTGTGAGGCTATCTGCCCGGCCCAAGCTATTACGATTGAGGCCGAAGAGC
GTGAGGATGGAAGCCGCCGCACGACCCGTTACGATATTGATATGACCAAGTGCATTTACTGTGGCTACTGCCAGG
AGAGCTGCCCTGTGGATGCCATCGTTGAGAGTGAGTTCAACACCCTCAGGTTACATCTCAATTGACATTCAAGCC
GGATTACTAACATTTTTTTCTTACAGCTTCCAACGCCGAGTATGCCACCGAGACCCGCGAGGAGCTTCTGTACAA
CAAGGAGAAGCTCCTCTCCAATGGTGATAAGTGGGAGCCTGAGATTGCAGCTAGTGCTCGTGCAGATGCTCCCTA
CCGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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