Protein ID | Pro_DTO377G3_2|g4971.t1 |
Gene name | |
Location | scaffold_11:210370..211903 |
Strand | + |
Gene length (bp) | 1533 |
Transcript length (bp) | 1308 |
Coding sequence length (bp) | 1308 |
Protein length (aa) | 436 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01569 | PAP2 | PAP2 superfamily | 1.6E-29 | 126 | 273 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 68 | 90 | 22 |
3 | 119 | 141 | 22 |
Orthofinder run ID | 2 |
Orthogroup | 5325 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4971.t1 MEIPAKLPFSKRRLRPRVVISYIFDYVIIIACVAGFAILNTIEPFHQHFSLTNISIQYPYAVHERIPMPYALCIS GAFPLVLIILYTLFIDGLFSHHKPHDAASGKRKLRGPHRWKDRLWELNCGILGLLLAQGLAFVITQALKNACGKP RPDLIDRCQPRAGSKDLFPGLSNSTICTGDPALLTDGFRSWPSGHSSSSFAGLVYISLWLGGKLHVMDNRGEAWK SLVIMAPLLAATLVAVSRIMDARHHPFDVITGSMLGIVCGFVAYRQYFPPLTEPWRKGRAYPIRTWGTEPSGPET VRLKGFRQDSSTALRNPEEERMDPPDIPRSEHARPDTSTYIHASNPYPSNVYNRRPHDLDLDGGAWSSSEDDLSS GYEMRHGHTMGQNPGPDHNAHQYDPSNAYVSQTQPLTANAGIHVPDAMAGPGRPLTNIPM* |
Coding | >Pro_DTO377G3_2|g4971.t1 ATGGAAATCCCCGCAAAACTCCCCTTCTCCAAGCGGCGGCTGCGACCGCGTGTTGTTATCTCCTACATCTTTGAC TATGTGATCATTATTGCCTGCGTTGCCGGCTTCGCCATTCTCAACACGATCGAGCCCTTCCACCAACACTTCTCC CTCACCAACATCTCCATCCAATATCCTTACGCCGTACATGAACGTATTCCCATGCCTTACGCCCTCTGCATCTCC GGTGCTTTCCCACTCGTTCTCATCATCCTCTACACCTTGTTTATCGATGGCTTGTTTTCGCACCATAAGCCACAT GACGCGGCGTCTGGGAAGCGGAAGCTAAGAGGTCCGCATCGCTGGAAGGACAGACTTTGGGAGCTCAATTGTGGT ATTTTGGGTCTGTTGCTGGCTCAGGGACTCGCGTTCGTCATTACACAGGCGCTGAAGAACGCATGCGGCAAACCG AGACCTGATCTTATTGATCGTTGTCAACCACGCGCTGGTAGCAAAGACCTTTTCCCAGGATTGTCAAACTCAACG ATTTGTACCGGTGATCCCGCGTTGTTAACAGACGGGTTTCGGTCGTGGCCATCTGGTCACAGTAGTTCCTCCTTC GCCGGTCTCGTCTACATATCGCTCTGGCTAGGTGGGAAGTTGCACGTTATGGACAATCGCGGTGAGGCCTGGAAA TCCCTTGTCATCATGGCTCCTCTACTAGCTGCAACCCTCGTGGCCGTATCGCGTATCATGGACGCGCGTCACCAC CCCTTCGATGTGATTACGGGGTCGATGCTTGGAATCGTCTGCGGCTTTGTCGCATATCGCCAGTATTTCCCACCG CTCACCGAACCCTGGCGCAAGGGCCGCGCCTACCCAATCCGAACCTGGGGGACCGAACCTTCAGGACCGGAGACA GTTCGACTCAAGGGCTTCAGGCAAGATAGCTCGACTGCTCTCCGCAACCCCGAAGAAGAGCGCATGGACCCGCCA GATATCCCCAGATCGGAACATGCCCGACCCGACACCTCTACCTATATTCATGCCTCCAACCCGTATCCATCGAAT GTTTACAATCGCCGACCACACGACCTTGATCTTGACGGCGGTGCTTGGTCGTCGAGTGAGGACGACCTTAGCAGC GGGTATGAAATGCGACATGGTCATACGATGGGGCAGAATCCCGGCCCCGACCACAATGCGCATCAATATGACCCC AGTAATGCATATGTGTCGCAGACACAGCCGCTGACGGCCAATGCGGGAATCCATGTCCCTGACGCGATGGCGGGT CCGGGGCGTCCGTTGACGAACATCCCCATGTAA |
Transcript | >Pro_DTO377G3_2|g4971.t1 ATGGAAATCCCCGCAAAACTCCCCTTCTCCAAGCGGCGGCTGCGACCGCGTGTTGTTATCTCCTACATCTTTGAC TATGTGATCATTATTGCCTGCGTTGCCGGCTTCGCCATTCTCAACACGATCGAGCCCTTCCACCAACACTTCTCC CTCACCAACATCTCCATCCAATATCCTTACGCCGTACATGAACGTATTCCCATGCCTTACGCCCTCTGCATCTCC GGTGCTTTCCCACTCGTTCTCATCATCCTCTACACCTTGTTTATCGATGGCTTGTTTTCGCACCATAAGCCACAT GACGCGGCGTCTGGGAAGCGGAAGCTAAGAGGTCCGCATCGCTGGAAGGACAGACTTTGGGAGCTCAATTGTGGT ATTTTGGGTCTGTTGCTGGCTCAGGGACTCGCGTTCGTCATTACACAGGCGCTGAAGAACGCATGCGGCAAACCG AGACCTGATCTTATTGATCGTTGTCAACCACGCGCTGGTAGCAAAGACCTTTTCCCAGGATTGTCAAACTCAACG ATTTGTACCGGTGATCCCGCGTTGTTAACAGACGGGTTTCGGTCGTGGCCATCTGGTCACAGTAGTTCCTCCTTC GCCGGTCTCGTCTACATATCGCTCTGGCTAGGTGGGAAGTTGCACGTTATGGACAATCGCGGTGAGGCCTGGAAA TCCCTTGTCATCATGGCTCCTCTACTAGCTGCAACCCTCGTGGCCGTATCGCGTATCATGGACGCGCGTCACCAC CCCTTCGATGTGATTACGGGGTCGATGCTTGGAATCGTCTGCGGCTTTGTCGCATATCGCCAGTATTTCCCACCG CTCACCGAACCCTGGCGCAAGGGCCGCGCCTACCCAATCCGAACCTGGGGGACCGAACCTTCAGGACCGGAGACA GTTCGACTCAAGGGCTTCAGGCAAGATAGCTCGACTGCTCTCCGCAACCCCGAAGAAGAGCGCATGGACCCGCCA GATATCCCCAGATCGGAACATGCCCGACCCGACACCTCTACCTATATTCATGCCTCCAACCCGTATCCATCGAAT GTTTACAATCGCCGACCACACGACCTTGATCTTGACGGCGGTGCTTGGTCGTCGAGTGAGGACGACCTTAGCAGC GGGTATGAAATGCGACATGGTCATACGATGGGGCAGAATCCCGGCCCCGACCACAATGCGCATCAATATGACCCC AGTAATGCATATGTGTCGCAGACACAGCCGCTGACGGCCAATGCGGGAATCCATGTCCCTGACGCGATGGCGGGT CCGGGGCGTCCGTTGACGAACATCCCCATGTAA |
Gene | >Pro_DTO377G3_2|g4971.t1 ATGGAAATCCCCGCAAAACTCCCCTTCTCCAAGCGGCGGCTGCGACCGCGTGTTGTTATCTCGTGTGTCGACTTT CCCCAGGTCTCCCCGCAAATCCAACTAACAATTCCACAGCTACATCTTTGACTATGTGATCATTATGTACGTGCA TCAATTCCTCTCTTTACTCCGTACTAACCATGGAAATAGTGCCTGCGTTGCCGGCTTCGCCATTCTCAACACGAT CGAGCCCTTCCACCAACACTTCTCCCTCACCAACATCTCCATCCAATATCCTTACGCCGTACATGAACGTATTCC CATGCCTTACGCCCTCTGCATCTCCGGTGCTTTCCCACTCGTTCTCATCATCCTCTACACCTTGTTTATCGATGG CTTGTTTTCGCACCATAAGCCACATGACGCGGCGTCTGGGAAGCGGAAGCTAAGAGGTCCGCATCGCTGGAAGGA CAGACTTTGGGAGCTCAATTGTGGTATTTTGGGTCTGTTGCTGGCTCAGGGACTCGCGTTCGTCATTACACAGGC GCTGAAGAACGCATGCGGCAAACCGAGACCTGATCTTATTGATCGTTGTCAACCACGCGCTGGTAGCAAAGACCT TTTCCCAGGATTGTCAAACTCAACGATTTGTACCGGTGATCCCGCGTTGTTAACAGACGGGTTTCGGTCGTGGCC ATCTGGTATGCGATATGACCCAGTACTGCTTTTCAGAGTCGCACGTGCTAACCTTAAAAATTCATCCAGGTCACA GTAGTTGTGTGTATACCTTTTGCGATTCTCCTAGTCTTTCATATTACTAACACAGTCCGATCAATAGCCTCCTTC GCCGGTCTCGTCTACATATCGCTCTGGCTAGGTGGGAAGTTGCACGTTATGGACAATCGCGGTGAGGCCTGGAAA TCCCTTGTCATCATGGCTCCTCTACTAGCTGCAACCCTCGTGGCCGTATCGCGTATCATGGACGCGCGTCACCAC CCCTTCGATGTGATTACGGGGTCGATGCTTGGAATCGTCTGCGGCTTTGTCGCATATCGCCAGTATTTCCCACCG CTCACCGAACCCTGGCGCAAGGGCCGCGCCTACCCAATCCGAACCTGGGGGACCGAACCTTCAGGACCGGAGACA GTTCGACTCAAGGGCTTCAGGCAAGATAGCTCGACTGCTCTCCGCAACCCCGAAGAAGAGCGCATGGACCCGCCA GATATCCCCAGATCGGAACATGCCCGACCCGACACCTCTACCTATATTCATGCCTCCAACCCGTATCCATCGAAT GTTTACAATCGCCGACCACACGACCTTGATCTTGACGGCGGTGCTTGGTCGTCGAGTGAGGACGACCTTAGCAGC GGGTATGAAATGCGACATGGTCATACGATGGGGCAGAATCCCGGCCCCGACCACAATGCGCATCAATATGACCCC AGTAATGCATATGTGTCGCAGACACAGCCGCTGACGGCCAATGCGGGAATCCATGTCCCTGACGCGATGGCGGGT CCGGGGCGTCCGTTGACGAACATCCCCATGTAA |