Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4956.t1
Gene name
Locationscaffold_11:168163..169918
Strand+
Gene length (bp)1755
Transcript length (bp)1641
Coding sequence length (bp)1641
Protein length (aa) 547

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 6.6E-46 42 486
PF00324 AA_permease Amino acid permease 8.0E-17 66 491

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 76 98 22
3 123 145 22
4 165 184 19
5 191 213 22
6 276 298 22
7 327 349 22
8 382 399 17
9 406 428 22
10 448 470 22
11 477 496 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4956.t1
MAVFSWQSSRDTEKPPKGHAAMDEVRLESALGHKQELPRNFGMWSLTSLGIVIANSWASTGGTIVAALQNGGPMA
VLYGLILVSIFYTTISASLAELASSMPSAGGVYYWSSVLSRNRGRTAGFFTGYLNACAWLLSASSMSSMLGNEGV
AMYLLKYPNVKWKSWQVFIVFQIVNWACCAIVCLGNRFIPVINRLSLILSMCGLVTTIVVLTVMPKDHASNTQVW
TEYHNNTGGWSDGVCFMTGLLNAAFAVGVPDCISHLSEEVPKPEIKVPQGIMLQMLTAFVTSFVYLIALFYSIQD
LDAVFASNIGFFPTAEIYRQATGSNAGAIGLIAVLFLATFPTLIGTFVTGGRMWWSLARDNATPFSNYFAQVHPT
LNCPVRATVAMSALVTCLGCIYIGSTTAFQALISSFIVLSSLSYFGAIFPHVLSGRGNMVPGPFYMGQKLGMAVN
IVSLMYILVTVIFFCFPLVLPATVENMNYTSVIVVGLMALTASWWVFRGRRQYNGPQYSFEAAERLAAFQEGKQG
RRSFIDLVGVSPVGIEHGNAP*
Coding >Pro_DTO377G3_2|g4956.t1
ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA
CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT
ATTGTCATTGCAAATTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCT
GTTCTATACGGACTGATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCC
ATGCCCTCTGCCGGTGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTT
ACTGGGTACCTGAATGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTG
GCCATGTATCTGCTCAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAAT
TGGGCGTGCTGTGCCATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCG
ATGTGTGGCCTCGTTACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGG
ACTGAGTACCACAACAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTT
GCGGTTGGAGTCCCAGACTGCATTAGCCATTTATCAGAAGAGGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGC
ATAATGTTGCAGATGCTCACAGCCTTCGTCACATCCTTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGAT
CTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTCCCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAAC
GCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTCGCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGC
GGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCGACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACA
CTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGCGCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGC
ACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATTGTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCG
CATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGGCCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAAC
ATTGTTTCTTTGATGTATATTTTGGTTACTGTTATTTTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAA
AATATGAACTATACCAGTGTGATCGTTGTCGGCTTGATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGA
CGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCTGCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGC
CGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCTGTTGGTATTGAGCATGGAAATGCTCCATGA
Transcript >Pro_DTO377G3_2|g4956.t1
ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA
CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT
ATTGTCATTGCAAATTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCT
GTTCTATACGGACTGATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCC
ATGCCCTCTGCCGGTGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTT
ACTGGGTACCTGAATGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTG
GCCATGTATCTGCTCAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAAT
TGGGCGTGCTGTGCCATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCG
ATGTGTGGCCTCGTTACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGG
ACTGAGTACCACAACAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTT
GCGGTTGGAGTCCCAGACTGCATTAGCCATTTATCAGAAGAGGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGC
ATAATGTTGCAGATGCTCACAGCCTTCGTCACATCCTTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGAT
CTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTCCCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAAC
GCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTCGCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGC
GGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCGACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACA
CTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGCGCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGC
ACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATTGTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCG
CATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGGCCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAAC
ATTGTTTCTTTGATGTATATTTTGGTTACTGTTATTTTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAA
AATATGAACTATACCAGTGTGATCGTTGTCGGCTTGATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGA
CGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCTGCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGC
CGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCTGTTGGTATTGAGCATGGAAATGCTCCATGA
Gene >Pro_DTO377G3_2|g4956.t1
ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA
CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT
ATTGTCATTGCAAAGTAAGGCCCTTGAGAACCGGAAATTGCACTGATAGAACCTCGACAGACTAACAGGACCAAG
TTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCTGTTCTATACGGACT
GATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCCATGCCCTCTGCCGG
TGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTTACTGGGTACCTGAA
TGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTGGCCATGTATCTGCT
CAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAATTGGGCGTGCTGTGC
CATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCGATGTGTGGCCTCGT
TACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGGACTGAGTACCACAA
CAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTTGCGGTTGGAGTCCC
AGACTGCATTAGCCATTTATCAGAAGAGGGTACGTCAGACTCAGGAGAAAAGGAAAGGAAATCACCAACTAACAT
GTTTTAGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGCATAATGTTGCAGATGCTCACAGCCTTCGTCACATCC
TTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGATCTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTC
CCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAACGCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTC
GCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGCGGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCG
ACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACACTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGC
GCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGCACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATT
GTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCGCATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGG
CCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAACATTGTTTCTTTGATGTATATTTTGGTTACTGTTATT
TTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAAAATATGAACTATACCAGTGTGATCGTTGTCGGCTTG
ATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGACGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCT
GCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGCCGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCT
GTTGGTATTGAGCATGGAAATGCTCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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