© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4956.t1 |
| Gene name | |
| Location | scaffold_11:168163..169918 |
| Strand | + |
| Gene length (bp) | 1755 |
| Transcript length (bp) | 1641 |
| Coding sequence length (bp) | 1641 |
| Protein length (aa) | 547 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.2E-48 | 42 | 486 |
| PF00324 | AA_permease | Amino acid permease | 8.8E-17 | 66 | 491 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 76 | 98 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 165 | 184 | 19 |
| 5 | 191 | 213 | 22 |
| 6 | 276 | 298 | 22 |
| 7 | 327 | 349 | 22 |
| 8 | 382 | 399 | 17 |
| 9 | 406 | 428 | 22 |
| 10 | 448 | 470 | 22 |
| 11 | 477 | 496 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4956.t1 MAVFSWQSSRDTEKPPKGHAAMDEVRLESALGHKQELPRNFGMWSLTSLGIVIANSWASTGGTIVAALQNGGPMA VLYGLILVSIFYTTISASLAELASSMPSAGGVYYWSSVLSRNRGRTAGFFTGYLNACAWLLSASSMSSMLGNEGV AMYLLKYPNVKWKSWQVFIVFQIVNWACCAIVCLGNRFIPVINRLSLILSMCGLVTTIVVLTVMPKDHASNTQVW TEYHNNTGGWSDGVCFMTGLLNAAFAVGVPDCISHLSEEVPKPEIKVPQGIMLQMLTAFVTSFVYLIALFYSIQD LDAVFASNIGFFPTAEIYRQATGSNAGAIGLIAVLFLATFPTLIGTFVTGGRMWWSLARDNATPFSNYFAQVHPT LNCPVRATVAMSALVTCLGCIYIGSTTAFQALISSFIVLSSLSYFGAIFPHVLSGRGNMVPGPFYMGQKLGMAVN IVSLMYILVTVIFFCFPLVLPATVENMNYTSVIVVGLMALTASWWVFRGRRQYNGPQYSFEAAERLAAFQEGKQG RRSFIDLVGVSPVGIEHGNAP* |
| Coding | >Pro_DTO377G3_2|g4956.t1 ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT ATTGTCATTGCAAATTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCT GTTCTATACGGACTGATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCC ATGCCCTCTGCCGGTGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTT ACTGGGTACCTGAATGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTG GCCATGTATCTGCTCAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAAT TGGGCGTGCTGTGCCATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCG ATGTGTGGCCTCGTTACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGG ACTGAGTACCACAACAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTT GCGGTTGGAGTCCCAGACTGCATTAGCCATTTATCAGAAGAGGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGC ATAATGTTGCAGATGCTCACAGCCTTCGTCACATCCTTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGAT CTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTCCCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAAC GCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTCGCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGC GGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCGACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACA CTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGCGCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGC ACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATTGTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCG CATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGGCCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAAC ATTGTTTCTTTGATGTATATTTTGGTTACTGTTATTTTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAA AATATGAACTATACCAGTGTGATCGTTGTCGGCTTGATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGA CGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCTGCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGC CGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCTGTTGGTATTGAGCATGGAAATGCTCCATGA |
| Transcript | >Pro_DTO377G3_2|g4956.t1 ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT ATTGTCATTGCAAATTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCT GTTCTATACGGACTGATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCC ATGCCCTCTGCCGGTGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTT ACTGGGTACCTGAATGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTG GCCATGTATCTGCTCAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAAT TGGGCGTGCTGTGCCATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCG ATGTGTGGCCTCGTTACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGG ACTGAGTACCACAACAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTT GCGGTTGGAGTCCCAGACTGCATTAGCCATTTATCAGAAGAGGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGC ATAATGTTGCAGATGCTCACAGCCTTCGTCACATCCTTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGAT CTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTCCCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAAC GCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTCGCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGC GGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCGACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACA CTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGCGCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGC ACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATTGTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCG CATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGGCCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAAC ATTGTTTCTTTGATGTATATTTTGGTTACTGTTATTTTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAA AATATGAACTATACCAGTGTGATCGTTGTCGGCTTGATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGA CGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCTGCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGC CGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCTGTTGGTATTGAGCATGGAAATGCTCCATGA |
| Gene | >Pro_DTO377G3_2|g4956.t1 ATGGCGGTGTTCTCATGGCAATCCTCTAGGGACACTGAAAAGCCCCCGAAAGGCCATGCCGCAATGGATGAAGTA CGGCTTGAATCTGCACTTGGACACAAACAAGAGCTGCCGCGGAACTTTGGGATGTGGAGTTTGACCAGCTTGGGT ATTGTCATTGCAAAGTAAGGCCCTTGAGAACCGGAAATTGCACTGATAGAACCTCGACAGACTAACAGGACCAAG TTCTTGGGCTTCAACAGGGGGTACAATCGTCGCTGCGCTCCAGAATGGCGGTCCAATGGCTGTTCTATACGGACT GATTCTAGTCAGCATTTTTTACACGACCATCTCAGCTTCCTTGGCCGAACTCGCCTCCTCCATGCCCTCTGCCGG TGGAGTATACTACTGGTCATCAGTTTTGAGCCGGAATCGGGGCCGCACAGCGGGGTTCTTTACTGGGTACCTGAA TGCTTGCGCGTGGCTGCTGTCAGCATCATCGATGAGTTCCATGTTGGGGAATGAGGGCGTGGCCATGTATCTGCT CAAATACCCGAATGTGAAGTGGAAATCCTGGCAAGTATTTATTGTATTCCAGATTGTCAATTGGGCGTGCTGTGC CATTGTATGCCTGGGAAATCGTTTCATTCCTGTCATTAACCGCCTTTCCCTTATCTTGTCGATGTGTGGCCTCGT TACAACTATCGTGGTTCTCACGGTGATGCCGAAAGATCATGCCAGCAATACCCAAGTGTGGACTGAGTACCACAA CAACACGGGTGGCTGGTCAGACGGGGTGTGTTTTATGACTGGTCTGTTGAATGCTGCATTTGCGGTTGGAGTCCC AGACTGCATTAGCCATTTATCAGAAGAGGGTACGTCAGACTCAGGAGAAAAGGAAAGGAAATCACCAACTAACAT GTTTTAGTCCCCAAACCCGAGATCAAGGTTCCTCAAGGCATAATGTTGCAGATGCTCACAGCCTTCGTCACATCC TTTGTGTACCTGATCGCCCTCTTTTACTCTATCCAAGATCTAGACGCTGTCTTTGCAAGCAACATTGGCTTTTTC CCAACCGCCGAGATCTACCGACAAGCGACAGGGTCTAACGCAGGTGCCATCGGTCTGATTGCAGTACTGTTTCTC GCAACCTTCCCAACGCTGATCGGGACATTCGTGACAGGCGGTCGGATGTGGTGGAGTCTTGCACGCGATAACGCG ACACCCTTTTCGAACTATTTCGCCCAAGTGCACCCGACACTGAACTGCCCCGTGCGTGCCACAGTCGCCATGAGC GCTCTCGTCACTTGTCTGGGGTGTATATATATCGGCAGCACGACGGCATTCCAAGCGCTGATCTCGTCGTTTATT GTGCTGAGCTCGCTGTCCTACTTTGGGGCCATCTTTCCGCATGTTTTGTCTGGTCGTGGAAATATGGTCCCCGGG CCATTTTATATGGGACAGAAACTTGGGATGGCGGTTAACATTGTTTCTTTGATGTATATTTTGGTTACTGTTATT TTCTTCTGTTTCCCCCTCGTGTTGCCGGCCACGGTTGAAAATATGAACTATACCAGTGTGATCGTTGTCGGCTTG ATGGCCCTCACTGCCTCCTGGTGGGTGTTCCGTGGTAGACGCCAATACAATGGCCCTCAGTATAGCTTTGAGGCT GCTGAGCGGTTGGCTGCTTTCCAAGAGGGCAAGCAGGGCCGCCGATCTTTTATTGATCTTGTGGGTGTTTCGCCT GTTGGTATTGAGCATGGAAATGCTCCATGA |