Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4947.t1
Gene name
Locationscaffold_11:143795..145735
Strand+
Gene length (bp)1940
Transcript length (bp)1890
Coding sequence length (bp)1890
Protein length (aa) 630

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00854 PTR2 POT family 1.2E-73 169 568

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 174 196 22
2 200 219 19
3 258 280 22
4 284 306 22
5 380 399 19
6 430 447 17
7 460 482 22
8 505 527 22
9 572 594 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 7.57 3.16 11.99
5d_25C Five days - 25 degrees Celsius 8.66 3.78 13.53
7d_25C Seven days - 25 degrees Celsius 6.94 2.74 11.13
10d_25C Ten days - 25 degrees Celsius 6.79 2.71 10.87
7d_15C Seven days - 15 degrees Celsius 11.59 5.49 17.69
7d_30C Seven days - 30 degrees Celsius 24.90 13.59 36.20

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.754660 no
3d_25C 7d_25C 0.854753 no
3d_25C 7d_15C 0.178272 no
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.814758 no
5d_25C 7d_25C 0.576155 no
5d_25C 7d_15C 0.377315 no
5d_25C 7d_30C 0.000700 yes
5d_25C 10d_25C 0.530161 no
7d_25C 7d_15C 0.100458 no
7d_25C 7d_30C 0.000700 yes
7d_25C 10d_25C 0.969167 no
7d_15C 7d_30C 0.002297 yes
7d_15C 10d_25C 0.087424 no
7d_30C 10d_25C 0.000700 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4947.t1
MAAQATGRDSSSLVIRDVEPANTTLQSNPVCNEVADKSIIPESYNLDVGDEDPTRDELHGPNALRRVSAPIPWAV
YTIAFVELCERFSYHGTHVLYSNFVNHALPLPAPNGPPGSNHATGAGGPSSQDFSGALGKGVETANAINTFNTLW
CYCLPLVGAWIADEYWGRYKTISWSIVAAILGHIILVISAIPPVIMNTDASFAVFILGVIIMGLGTGGFKPNISA
LVVEQIPAVNLKVRTLKSGERVVVDPTITQSRIYHYFYLLINIGALVGQIGMVYAEKYIGFWLAFLLPTLMFLTT
PPIMWWGRKRYRQSPPAGSVTYKAIMTILFCMRDRWHFNPYIMWKRTHDGTFWDTAKPSNIEPQSRPRWMTFDDA
WVDEVHRGFAACAVFCYFPFYWLAYNQLTNNLNAQASTMTVKGVPNDIVNNLDPLALIIFVPICDKLLYPVLRKM
GLQFTAIKKIALGFWLASLSMIWAAIVQSYIYLTSPCGFGANTCPNDDGSVHPCHILVWAQTGSYVLVAVSEIFA
VITSMEYAYSKAPRNMRSLVQAMNMFTNAVSAAIAETLIPLSRAPLLAWNYGIFAILTFVGGAVFIVQFWGLDKE
EDELNNLPEGHVQASESPGDHVGVGPSRG*
Coding >Pro_DTO377G3_2|g4947.t1
ATGGCAGCTCAGGCCACAGGCCGGGACTCGAGCTCGCTCGTTATCCGTGATGTTGAGCCTGCCAATACCACCCTG
CAAAGTAACCCAGTTTGCAATGAGGTCGCTGATAAGAGTATCATCCCCGAGTCGTACAACCTTGACGTGGGTGAC
GAGGATCCAACCAGAGATGAACTTCATGGCCCCAATGCCTTGCGTCGCGTCTCAGCTCCGATTCCCTGGGCTGTC
TACACCATCGCATTTGTTGAGCTGTGCGAGCGTTTTTCCTACCACGGAACCCATGTTCTCTACTCTAACTTCGTG
AACCATGCTCTCCCCCTTCCTGCCCCGAATGGCCCTCCCGGATCAAACCACGCAACCGGGGCTGGTGGCCCTAGC
TCTCAGGATTTCTCCGGTGCTTTGGGTAAGGGTGTTGAGACTGCCAACGCTATCAACACCTTCAACACCCTCTGG
TGCTACTGCCTTCCTCTAGTGGGTGCCTGGATCGCCGACGAGTACTGGGGACGATACAAGACCATCTCCTGGTCT
ATTGTGGCTGCCATTTTAGGTCACATCATTTTGGTGATCTCTGCCATTCCACCGGTGATTATGAATACTGATGCC
TCCTTCGCTGTGTTCATTCTAGGTGTAATAATCATGGGCTTAGGTACTGGTGGCTTCAAGCCCAACATATCCGCT
CTGGTTGTCGAGCAGATACCTGCCGTCAATCTCAAGGTGCGTACACTGAAGTCTGGTGAGCGTGTTGTCGTCGAC
CCGACTATCACTCAGAGCCGTATCTATCACTACTTCTACCTGCTTATCAACATAGGCGCACTGGTCGGTCAGATC
GGCATGGTCTATGCGGAGAAGTATATCGGCTTCTGGTTGGCCTTTCTGCTTCCCACGCTCATGTTCCTGACTACT
CCACCCATCATGTGGTGGGGTCGCAAGCGCTATCGCCAGTCTCCCCCGGCGGGCTCGGTAACTTACAAGGCCATC
ATGACAATCTTATTTTGTATGCGCGACCGCTGGCACTTTAATCCATACATCATGTGGAAACGAACACACGATGGC
ACTTTCTGGGACACCGCGAAGCCCTCCAACATCGAACCCCAATCCCGACCCAGGTGGATGACCTTTGACGATGCA
TGGGTGGATGAAGTGCACCGTGGATTTGCAGCTTGCGCAGTTTTTTGCTATTTCCCATTCTACTGGCTAGCCTAC
AACCAACTGACGAACAATCTCAACGCACAGGCTAGCACGATGACCGTGAAAGGCGTCCCGAACGATATTGTGAAC
AACCTTGACCCCTTGGCGCTGATTATCTTCGTCCCGATCTGCGACAAGCTCCTTTACCCCGTCTTGCGCAAAATG
GGCCTTCAATTCACGGCCATTAAGAAGATTGCCCTCGGTTTCTGGTTGGCGTCGCTCTCCATGATATGGGCTGCT
ATCGTTCAGTCCTACATCTACCTGACTTCGCCCTGTGGCTTCGGAGCTAACACCTGCCCCAACGACGATGGCAGC
GTCCACCCATGTCATATCCTTGTTTGGGCTCAGACTGGATCCTACGTCCTGGTTGCTGTATCGGAGATCTTTGCC
GTCATCACCTCAATGGAGTATGCCTACTCCAAGGCACCTCGCAATATGCGTTCCCTCGTCCAAGCTATGAATATG
TTCACTAACGCTGTCTCCGCAGCCATAGCTGAGACTTTGATACCGCTTTCCAGGGCCCCTTTGTTGGCCTGGAAC
TACGGCATCTTCGCCATCTTGACCTTTGTCGGTGGCGCCGTCTTCATCGTCCAGTTCTGGGGCCTGGATAAAGAG
GAGGACGAGTTGAACAACTTGCCCGAGGGTCATGTGCAGGCTAGTGAGAGCCCGGGAGACCATGTTGGGGTTGGC
CCTAGTCGTGGGTGA
Transcript >Pro_DTO377G3_2|g4947.t1
ATGGCAGCTCAGGCCACAGGCCGGGACTCGAGCTCGCTCGTTATCCGTGATGTTGAGCCTGCCAATACCACCCTG
CAAAGTAACCCAGTTTGCAATGAGGTCGCTGATAAGAGTATCATCCCCGAGTCGTACAACCTTGACGTGGGTGAC
GAGGATCCAACCAGAGATGAACTTCATGGCCCCAATGCCTTGCGTCGCGTCTCAGCTCCGATTCCCTGGGCTGTC
TACACCATCGCATTTGTTGAGCTGTGCGAGCGTTTTTCCTACCACGGAACCCATGTTCTCTACTCTAACTTCGTG
AACCATGCTCTCCCCCTTCCTGCCCCGAATGGCCCTCCCGGATCAAACCACGCAACCGGGGCTGGTGGCCCTAGC
TCTCAGGATTTCTCCGGTGCTTTGGGTAAGGGTGTTGAGACTGCCAACGCTATCAACACCTTCAACACCCTCTGG
TGCTACTGCCTTCCTCTAGTGGGTGCCTGGATCGCCGACGAGTACTGGGGACGATACAAGACCATCTCCTGGTCT
ATTGTGGCTGCCATTTTAGGTCACATCATTTTGGTGATCTCTGCCATTCCACCGGTGATTATGAATACTGATGCC
TCCTTCGCTGTGTTCATTCTAGGTGTAATAATCATGGGCTTAGGTACTGGTGGCTTCAAGCCCAACATATCCGCT
CTGGTTGTCGAGCAGATACCTGCCGTCAATCTCAAGGTGCGTACACTGAAGTCTGGTGAGCGTGTTGTCGTCGAC
CCGACTATCACTCAGAGCCGTATCTATCACTACTTCTACCTGCTTATCAACATAGGCGCACTGGTCGGTCAGATC
GGCATGGTCTATGCGGAGAAGTATATCGGCTTCTGGTTGGCCTTTCTGCTTCCCACGCTCATGTTCCTGACTACT
CCACCCATCATGTGGTGGGGTCGCAAGCGCTATCGCCAGTCTCCCCCGGCGGGCTCGGTAACTTACAAGGCCATC
ATGACAATCTTATTTTGTATGCGCGACCGCTGGCACTTTAATCCATACATCATGTGGAAACGAACACACGATGGC
ACTTTCTGGGACACCGCGAAGCCCTCCAACATCGAACCCCAATCCCGACCCAGGTGGATGACCTTTGACGATGCA
TGGGTGGATGAAGTGCACCGTGGATTTGCAGCTTGCGCAGTTTTTTGCTATTTCCCATTCTACTGGCTAGCCTAC
AACCAACTGACGAACAATCTCAACGCACAGGCTAGCACGATGACCGTGAAAGGCGTCCCGAACGATATTGTGAAC
AACCTTGACCCCTTGGCGCTGATTATCTTCGTCCCGATCTGCGACAAGCTCCTTTACCCCGTCTTGCGCAAAATG
GGCCTTCAATTCACGGCCATTAAGAAGATTGCCCTCGGTTTCTGGTTGGCGTCGCTCTCCATGATATGGGCTGCT
ATCGTTCAGTCCTACATCTACCTGACTTCGCCCTGTGGCTTCGGAGCTAACACCTGCCCCAACGACGATGGCAGC
GTCCACCCATGTCATATCCTTGTTTGGGCTCAGACTGGATCCTACGTCCTGGTTGCTGTATCGGAGATCTTTGCC
GTCATCACCTCAATGGAGTATGCCTACTCCAAGGCACCTCGCAATATGCGTTCCCTCGTCCAAGCTATGAATATG
TTCACTAACGCTGTCTCCGCAGCCATAGCTGAGACTTTGATACCGCTTTCCAGGGCCCCTTTGTTGGCCTGGAAC
TACGGCATCTTCGCCATCTTGACCTTTGTCGGTGGCGCCGTCTTCATCGTCCAGTTCTGGGGCCTGGATAAAGAG
GAGGACGAGTTGAACAACTTGCCCGAGGGTCATGTGCAGGCTAGTGAGAGCCCGGGAGACCATGTTGGGGTTGGC
CCTAGTCGTGGGTGA
Gene >Pro_DTO377G3_2|g4947.t1
ATGGCAGCTCAGGCCACAGGCCGGGACTCGAGCTCGCTCGTTATCCGTGATGTTGAGCCTGCCAATACCACCCTG
CAAAGTAACCCAGTTTGCAATGAGGTCGCTGATAAGAGTATCATCCCCGAGTCGTACAACCTTGACGTGGGTGAC
GAGGATCCAACCAGAGATGAACTTCATGGCCCCAATGCCTTGCGTCGCGTCTCAGCTCCGATTCCCTGGGCTGTC
TACACCATCGCATTTGTTGAGCTGTGCGAGCGTTTTTCCTACCACGGAACCCATGTTCTCTGTAAGATAGCCACA
TCCCTATAAATATACTCTTCTAACATTGAAACACAGACTCTAACTTCGTGAACCATGCTCTCCCCCTTCCTGCCC
CGAATGGCCCTCCCGGATCAAACCACGCAACCGGGGCTGGTGGCCCTAGCTCTCAGGATTTCTCCGGTGCTTTGG
GTAAGGGTGTTGAGACTGCCAACGCTATCAACACCTTCAACACCCTCTGGTGCTACTGCCTTCCTCTAGTGGGTG
CCTGGATCGCCGACGAGTACTGGGGACGATACAAGACCATCTCCTGGTCTATTGTGGCTGCCATTTTAGGTCACA
TCATTTTGGTGATCTCTGCCATTCCACCGGTGATTATGAATACTGATGCCTCCTTCGCTGTGTTCATTCTAGGTG
TAATAATCATGGGCTTAGGTACTGGTGGCTTCAAGCCCAACATATCCGCTCTGGTTGTCGAGCAGATACCTGCCG
TCAATCTCAAGGTGCGTACACTGAAGTCTGGTGAGCGTGTTGTCGTCGACCCGACTATCACTCAGAGCCGTATCT
ATCACTACTTCTACCTGCTTATCAACATAGGCGCACTGGTCGGTCAGATCGGCATGGTCTATGCGGAGAAGTATA
TCGGCTTCTGGTTGGCCTTTCTGCTTCCCACGCTCATGTTCCTGACTACTCCACCCATCATGTGGTGGGGTCGCA
AGCGCTATCGCCAGTCTCCCCCGGCGGGCTCGGTAACTTACAAGGCCATCATGACAATCTTATTTTGTATGCGCG
ACCGCTGGCACTTTAATCCATACATCATGTGGAAACGAACACACGATGGCACTTTCTGGGACACCGCGAAGCCCT
CCAACATCGAACCCCAATCCCGACCCAGGTGGATGACCTTTGACGATGCATGGGTGGATGAAGTGCACCGTGGAT
TTGCAGCTTGCGCAGTTTTTTGCTATTTCCCATTCTACTGGCTAGCCTACAACCAACTGACGAACAATCTCAACG
CACAGGCTAGCACGATGACCGTGAAAGGCGTCCCGAACGATATTGTGAACAACCTTGACCCCTTGGCGCTGATTA
TCTTCGTCCCGATCTGCGACAAGCTCCTTTACCCCGTCTTGCGCAAAATGGGCCTTCAATTCACGGCCATTAAGA
AGATTGCCCTCGGTTTCTGGTTGGCGTCGCTCTCCATGATATGGGCTGCTATCGTTCAGTCCTACATCTACCTGA
CTTCGCCCTGTGGCTTCGGAGCTAACACCTGCCCCAACGACGATGGCAGCGTCCACCCATGTCATATCCTTGTTT
GGGCTCAGACTGGATCCTACGTCCTGGTTGCTGTATCGGAGATCTTTGCCGTCATCACCTCAATGGAGTATGCCT
ACTCCAAGGCACCTCGCAATATGCGTTCCCTCGTCCAAGCTATGAATATGTTCACTAACGCTGTCTCCGCAGCCA
TAGCTGAGACTTTGATACCGCTTTCCAGGGCCCCTTTGTTGGCCTGGAACTACGGCATCTTCGCCATCTTGACCT
TTGTCGGTGGCGCCGTCTTCATCGTCCAGTTCTGGGGCCTGGATAAAGAGGAGGACGAGTTGAACAACTTGCCCG
AGGGTCATGTGCAGGCTAGTGAGAGCCCGGGAGACCATGTTGGGGTTGGCCCTAGTCGTGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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