Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4946.t1
Gene name
Locationscaffold_11:141010..142046
Strand+
Gene length (bp)1036
Transcript length (bp)861
Coding sequence length (bp)861
Protein length (aa) 287

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.2E-55 42 282
PF00106 adh_short short chain dehydrogenase 2.5E-46 36 231
PF08659 KR KR domain 2.0E-14 37 195
PF01370 Epimerase NAD dependent epimerase/dehydratase family 8.2E-06 38 212

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4946.t1
MSVSIETTTVPTAPITAQPVLLGQKSRMPEFSLAGKVVLVSGAARGLGLTQTEALLEAGAKVYALDRLEEPAPEF
EQIQQRAMELGTELHYRRIDVRDTELLNSVIETIANEEGRMDGLIAAAGIQQETPALEYSAKDSNTMFEVNVTGV
FMTAQAVAKQMIRFGNGGSIAMIASMSGTIANRGLICPAYNASKAAVLQLARNLASEWGTYNIRVNTISPGYIVT
AMVEKLFLEFPERRDQWPKENMLARLSRPEEYRGAAVFLISDASSFMTGSDLRMDGGHAAW*
Coding >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGCCCCCGAGTTT
GAGCAGATCCAACAGCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAA
CTTCTCAACAGTGTCATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATT
CAGCAGGAGACCCCAGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTG
TTCATGACCGCCCAGGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCT
ATGAGCGGCACTATTGCCAATCGCGGTCTTATTTGCCCCGCATATAACGCTAGCAAGGCTGCTGTCCTTCAACTC
GCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATACCATCTCCCCTGGCTACATTGTCACC
GCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTGGCCCAAGGAGAACATGCTTGCCCGT
CTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGATGCTAGCAGCTTCATGACTGGAAGT
GACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG
Transcript >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGCCCCCGAGTTT
GAGCAGATCCAACAGCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAA
CTTCTCAACAGTGTCATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATT
CAGCAGGAGACCCCAGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTG
TTCATGACCGCCCAGGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCT
ATGAGCGGCACTATTGCCAATCGCGGTCTTATTTGCCCCGCATATAACGCTAGCAAGGCTGCTGTCCTTCAACTC
GCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATACCATCTCCCCTGGCTACATTGTCACC
GCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTGGCCCAAGGAGAACATGCTTGCCCGT
CTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGATGCTAGCAGCTTCATGACTGGAAGT
GACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG
Gene >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGTAAGTATCTAC
ATCCCTCGCTTCTATGGCAGCACTAAACTAACAACCACTCAATCACCAGGCCCCCGAGTTTGAGCAGATCCAACA
GCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAACTTCTCAACAGTGT
CATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATTCAGCAGGAGACCCC
AGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTGTTCATGACCGCCCA
GGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCTATGAGCGGCACTAT
TGCCAATCGCGTACGTTCCCACTCCCCTCTCAGACTTTCTTTCTCTCTATGGAACATTTCCCCGCTTCATGTCAC
ATTCCGCTCTTCTGGCTGGCCTCGATGATCTAACATATTCTCCCTACAGGGTCTTATTTGCCCCGCATATAACGC
TAGCAAGGCTGCTGTCCTTCAACTCGCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATAC
CATCTCCCCTGGCTACATTGTCACCGCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTG
GCCCAAGGAGAACATGCTTGCCCGTCTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGA
TGCTAGCAGCTTCATGACTGGAAGTGACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail