Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4946.t1
Gene name
Locationscaffold_11:141010..142046
Strand+
Gene length (bp)1036
Transcript length (bp)861
Coding sequence length (bp)861
Protein length (aa) 287

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.6E-56 42 282
PF00106 adh_short short chain dehydrogenase 2.7E-46 36 231
PF08659 KR KR domain 5.9E-14 38 186
PF01370 Epimerase NAD dependent epimerase/dehydratase family 9.0E-06 38 212

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4946.t1
MSVSIETTTVPTAPITAQPVLLGQKSRMPEFSLAGKVVLVSGAARGLGLTQTEALLEAGAKVYALDRLEEPAPEF
EQIQQRAMELGTELHYRRIDVRDTELLNSVIETIANEEGRMDGLIAAAGIQQETPALEYSAKDSNTMFEVNVTGV
FMTAQAVAKQMIRFGNGGSIAMIASMSGTIANRGLICPAYNASKAAVLQLARNLASEWGTYNIRVNTISPGYIVT
AMVEKLFLEFPERRDQWPKENMLARLSRPEEYRGAAVFLISDASSFMTGSDLRMDGGHAAW*
Coding >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGCCCCCGAGTTT
GAGCAGATCCAACAGCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAA
CTTCTCAACAGTGTCATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATT
CAGCAGGAGACCCCAGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTG
TTCATGACCGCCCAGGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCT
ATGAGCGGCACTATTGCCAATCGCGGTCTTATTTGCCCCGCATATAACGCTAGCAAGGCTGCTGTCCTTCAACTC
GCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATACCATCTCCCCTGGCTACATTGTCACC
GCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTGGCCCAAGGAGAACATGCTTGCCCGT
CTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGATGCTAGCAGCTTCATGACTGGAAGT
GACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG
Transcript >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGCCCCCGAGTTT
GAGCAGATCCAACAGCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAA
CTTCTCAACAGTGTCATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATT
CAGCAGGAGACCCCAGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTG
TTCATGACCGCCCAGGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCT
ATGAGCGGCACTATTGCCAATCGCGGTCTTATTTGCCCCGCATATAACGCTAGCAAGGCTGCTGTCCTTCAACTC
GCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATACCATCTCCCCTGGCTACATTGTCACC
GCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTGGCCCAAGGAGAACATGCTTGCCCGT
CTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGATGCTAGCAGCTTCATGACTGGAAGT
GACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG
Gene >Pro_DTO377G3_2|g4946.t1
ATGTCTGTCTCCATCGAAACCACTACAGTTCCCACTGCACCCATTACCGCCCAGCCCGTCCTGCTGGGCCAGAAG
TCCAGAATGCCCGAGTTCAGTCTCGCTGGGAAGGTGGTGTTGGTCTCAGGTGCTGCCCGTGGTCTAGGATTGACC
CAGACAGAGGCACTCCTGGAGGCCGGAGCGAAGGTATACGCACTCGACCGTCTGGAAGAGCCGGTAAGTATCTAC
ATCCCTCGCTTCTATGGCAGCACTAAACTAACAACCACTCAATCACCAGGCCCCCGAGTTTGAGCAGATCCAACA
GCGCGCAATGGAGCTTGGCACCGAGTTGCACTACCGTCGTATCGACGTGCGTGACACAGAACTTCTCAACAGTGT
CATCGAGACCATCGCCAATGAAGAGGGCCGCATGGATGGTCTCATTGCAGCAGCGGGCATTCAGCAGGAGACCCC
AGCGCTCGAATACTCAGCCAAGGACAGCAACACCATGTTCGAGGTCAATGTCACGGGGGTGTTCATGACCGCCCA
GGCTGTGGCTAAGCAAATGATTCGCTTTGGAAACGGAGGTAGTATCGCTATGATCGCCTCTATGAGCGGCACTAT
TGCCAATCGCGTACGTTCCCACTCCCCTCTCAGACTTTCTTTCTCTCTATGGAACATTTCCCCGCTTCATGTCAC
ATTCCGCTCTTCTGGCTGGCCTCGATGATCTAACATATTCTCCCTACAGGGTCTTATTTGCCCCGCATATAACGC
TAGCAAGGCTGCTGTCCTTCAACTCGCCCGCAACCTCGCTTCTGAATGGGGCACCTACAACATCCGCGTGAATAC
CATCTCCCCTGGCTACATTGTCACCGCCATGGTTGAGAAGCTCTTTCTCGAGTTTCCCGAACGTCGCGACCAGTG
GCCCAAGGAGAACATGCTTGCCCGTCTTTCCCGACCGGAAGAGTACCGTGGTGCCGCTGTCTTCTTGATTAGCGA
TGCTAGCAGCTTCATGACTGGAAGTGACCTGCGAATGGATGGTGGCCACGCCGCATGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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