Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4944.t1
Gene name
Locationscaffold_11:133400..134186
Strand+
Gene length (bp)786
Transcript length (bp)786
Coding sequence length (bp)786
Protein length (aa) 262

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04299 FMN_bind_2 Putative FMN-binding domain 6.8E-58 1 210

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
UAF complex subunit Rrn10

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4944.t1
MYLRAVHAEGQLAVLQQFIRDNPLGIITTAIKSPIYSFIQSSHVPFVLDVPPSTEGDDTAPTGILRGHMAKQNPQ
AKALMEALAEQNAAGNNKFELTDEVLILFNGPHHHYVTPKFYTATKPVSGKVVPTWNYSAVQAYGKISVYCNSKA
EETGAFLQKQIQDLSRQSEEGIMGYTGGDKKSAWNVSDAPVNYVELLKKNILGIEIRVERLQGKFKMSQEMGEGD
REGVVQGFEELGSDVGRGIADCVRERAAMKDQQKVV*
Coding >Pro_DTO377G3_2|g4944.t1
ATGTATCTTCGCGCCGTCCACGCCGAGGGACAACTCGCCGTCCTCCAGCAATTCATCCGTGATAACCCACTCGGC
ATCATAACAACGGCCATCAAATCCCCGATCTACTCATTCATCCAATCAAGCCATGTCCCCTTCGTCCTCGATGTA
CCTCCCTCGACCGAGGGCGATGACACAGCCCCGACCGGCATCCTGCGCGGCCACATGGCCAAACAGAACCCACAA
GCAAAAGCCTTGATGGAAGCCCTCGCTGAGCAAAACGCAGCAGGGAATAACAAATTCGAGCTCACGGATGAGGTG
CTGATCCTATTCAACGGCCCCCACCACCACTACGTGACGCCCAAGTTCTACACAGCAACCAAGCCAGTCTCTGGC
AAGGTCGTCCCGACGTGGAACTACTCCGCCGTGCAGGCGTATGGCAAGATTAGTGTGTACTGCAATTCCAAGGCA
GAAGAAACGGGTGCGTTTTTGCAAAAACAGATTCAGGACCTGTCGCGGCAGTCTGAAGAGGGCATTATGGGGTAT
ACTGGGGGTGATAAGAAGAGCGCATGGAATGTATCCGATGCGCCGGTTAATTATGTGGAGCTTTTGAAGAAGAAT
ATTCTTGGCATTGAGATTCGTGTTGAGCGATTGCAGGGGAAGTTTAAGATGAGTCAGGAGATGGGCGAAGGGGAT
CGGGAGGGGGTTGTGCAAGGGTTTGAAGAGTTGGGGTCGGACGTTGGGAGGGGTATTGCTGATTGTGTTAGGGAG
CGTGCTGCCATGAAGGATCAGCAGAAAGTGGTGTAA
Transcript >Pro_DTO377G3_2|g4944.t1
ATGTATCTTCGCGCCGTCCACGCCGAGGGACAACTCGCCGTCCTCCAGCAATTCATCCGTGATAACCCACTCGGC
ATCATAACAACGGCCATCAAATCCCCGATCTACTCATTCATCCAATCAAGCCATGTCCCCTTCGTCCTCGATGTA
CCTCCCTCGACCGAGGGCGATGACACAGCCCCGACCGGCATCCTGCGCGGCCACATGGCCAAACAGAACCCACAA
GCAAAAGCCTTGATGGAAGCCCTCGCTGAGCAAAACGCAGCAGGGAATAACAAATTCGAGCTCACGGATGAGGTG
CTGATCCTATTCAACGGCCCCCACCACCACTACGTGACGCCCAAGTTCTACACAGCAACCAAGCCAGTCTCTGGC
AAGGTCGTCCCGACGTGGAACTACTCCGCCGTGCAGGCGTATGGCAAGATTAGTGTGTACTGCAATTCCAAGGCA
GAAGAAACGGGTGCGTTTTTGCAAAAACAGATTCAGGACCTGTCGCGGCAGTCTGAAGAGGGCATTATGGGGTAT
ACTGGGGGTGATAAGAAGAGCGCATGGAATGTATCCGATGCGCCGGTTAATTATGTGGAGCTTTTGAAGAAGAAT
ATTCTTGGCATTGAGATTCGTGTTGAGCGATTGCAGGGGAAGTTTAAGATGAGTCAGGAGATGGGCGAAGGGGAT
CGGGAGGGGGTTGTGCAAGGGTTTGAAGAGTTGGGGTCGGACGTTGGGAGGGGTATTGCTGATTGTGTTAGGGAG
CGTGCTGCCATGAAGGATCAGCAGAAAGTGGTGTAA
Gene >Pro_DTO377G3_2|g4944.t1
ATGTATCTTCGCGCCGTCCACGCCGAGGGACAACTCGCCGTCCTCCAGCAATTCATCCGTGATAACCCACTCGGC
ATCATAACAACGGCCATCAAATCCCCGATCTACTCATTCATCCAATCAAGCCATGTCCCCTTCGTCCTCGATGTA
CCTCCCTCGACCGAGGGCGATGACACAGCCCCGACCGGCATCCTGCGCGGCCACATGGCCAAACAGAACCCACAA
GCAAAAGCCTTGATGGAAGCCCTCGCTGAGCAAAACGCAGCAGGGAATAACAAATTCGAGCTCACGGATGAGGTG
CTGATCCTATTCAACGGCCCCCACCACCACTACGTGACGCCCAAGTTCTACACAGCAACCAAGCCAGTCTCTGGC
AAGGTCGTCCCGACGTGGAACTACTCCGCCGTGCAGGCGTATGGCAAGATTAGTGTGTACTGCAATTCCAAGGCA
GAAGAAACGGGTGCGTTTTTGCAAAAACAGATTCAGGACCTGTCGCGGCAGTCTGAAGAGGGCATTATGGGGTAT
ACTGGGGGTGATAAGAAGAGCGCATGGAATGTATCCGATGCGCCGGTTAATTATGTGGAGCTTTTGAAGAAGAAT
ATTCTTGGCATTGAGATTCGTGTTGAGCGATTGCAGGGGAAGTTTAAGATGAGTCAGGAGATGGGCGAAGGGGAT
CGGGAGGGGGTTGTGCAAGGGTTTGAAGAGTTGGGGTCGGACGTTGGGAGGGGTATTGCTGATTGTGTTAGGGAG
CGTGCTGCCATGAAGGATCAGCAGAAAGTGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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