Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4930.t1
Gene name
Locationscaffold_11:91737..92767
Strand+
Gene length (bp)1030
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11563 Protoglobin Protoglobin 7.1E-55 26 205

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4930.t1
MDFRSGSGSAGAPMHVDRKLLYTSLEERIKYLHSFLDFNSSDIEALLSGNKYIKQLIPAVVNLVYKKILQYDITS
RAFHTRTTVDETEPEEGYLQEDTPKIQRRKLFLRWYLTRLCQDPTTMEFWRYLNKVGMMHSGQVRRTPLNIEYIH
LGVCLGYIQDIWIEAMLSHPHLSLRRKIALVRAVNKILWIQNDLFARYHSSDGEEFADEMSMFNYTEDQEGYLGE
KRILGSSSGSSTEDDRSSISSGIAPSIDGVAPSIHSVAPSIQSASTAPKGSACPFAEMAKGSNSTETKIWAN*
Coding >Pro_DTO377G3_2|g4930.t1
ATGGATTTCAGATCAGGATCAGGATCGGCTGGTGCGCCAATGCATGTCGACCGGAAACTGCTCTATACAAGCTTG
GAAGAGCGAATCAAGTACCTCCATAGCTTCCTCGACTTCAACTCTAGCGATATCGAAGCACTGCTCTCTGGCAAC
AAATACATCAAACAATTGATCCCGGCAGTCGTCAACCTGGTATATAAGAAGATTCTCCAATATGACATCACATCC
CGCGCCTTCCACACACGGACAACAGTCGACGAGACCGAACCCGAGGAGGGCTACCTCCAGGAAGACACACCGAAA
ATTCAGCGCCGCAAGCTGTTCCTGCGCTGGTACCTGACGCGTCTATGCCAGGACCCGACAACAATGGAATTCTGG
CGGTACTTGAACAAAGTTGGCATGATGCACAGCGGACAAGTACGCAGAACACCTCTCAACATCGAGTACATTCAC
CTCGGCGTATGCCTGGGCTACATCCAAGATATCTGGATCGAAGCCATGCTATCCCACCCACACCTGTCGCTGCGA
CGCAAGATCGCGCTCGTGCGCGCCGTCAACAAGATCCTCTGGATCCAGAACGATCTCTTCGCCCGGTATCACTCT
AGCGACGGTGAAGAGTTCGCCGACGAGATGTCCATGTTCAACTATACCGAGGATCAGGAGGGATATCTCGGCGAA
AAGCGCATTCTCGGCAGCAGCTCCGGTAGCTCGACCGAGGATGACCGGTCCAGTATTTCTAGCGGTATAGCGCCC
TCTATAGATGGTGTGGCGCCTTCCATACACAGTGTGGCGCCGTCCATACAAAGCGCGTCCACTGCGCCGAAGGGA
TCGGCGTGTCCCTTCGCAGAGATGGCCAAGGGCAGCAATTCGACCGAGACGAAGATTTGGGCCAATTGA
Transcript >Pro_DTO377G3_2|g4930.t1
ATGGATTTCAGATCAGGATCAGGATCGGCTGGTGCGCCAATGCATGTCGACCGGAAACTGCTCTATACAAGCTTG
GAAGAGCGAATCAAGTACCTCCATAGCTTCCTCGACTTCAACTCTAGCGATATCGAAGCACTGCTCTCTGGCAAC
AAATACATCAAACAATTGATCCCGGCAGTCGTCAACCTGGTATATAAGAAGATTCTCCAATATGACATCACATCC
CGCGCCTTCCACACACGGACAACAGTCGACGAGACCGAACCCGAGGAGGGCTACCTCCAGGAAGACACACCGAAA
ATTCAGCGCCGCAAGCTGTTCCTGCGCTGGTACCTGACGCGTCTATGCCAGGACCCGACAACAATGGAATTCTGG
CGGTACTTGAACAAAGTTGGCATGATGCACAGCGGACAAGTACGCAGAACACCTCTCAACATCGAGTACATTCAC
CTCGGCGTATGCCTGGGCTACATCCAAGATATCTGGATCGAAGCCATGCTATCCCACCCACACCTGTCGCTGCGA
CGCAAGATCGCGCTCGTGCGCGCCGTCAACAAGATCCTCTGGATCCAGAACGATCTCTTCGCCCGGTATCACTCT
AGCGACGGTGAAGAGTTCGCCGACGAGATGTCCATGTTCAACTATACCGAGGATCAGGAGGGATATCTCGGCGAA
AAGCGCATTCTCGGCAGCAGCTCCGGTAGCTCGACCGAGGATGACCGGTCCAGTATTTCTAGCGGTATAGCGCCC
TCTATAGATGGTGTGGCGCCTTCCATACACAGTGTGGCGCCGTCCATACAAAGCGCGTCCACTGCGCCGAAGGGA
TCGGCGTGTCCCTTCGCAGAGATGGCCAAGGGCAGCAATTCGACCGAGACGAAGATTTGGGCCAATTGA
Gene >Pro_DTO377G3_2|g4930.t1
ATGGATTTCAGATCAGGATCAGGATCGGCTGGTGCGCCAATGCATGTCGACCGGAAACTGCTCTATACAAGCTTG
GAAGAGCGAATCAAGTACCTCCATAGCTTCCTCGACTTCAACTCTAGTAAGCTTTTACCATGGACCACCCTCGAG
TCAGCCACTAACGTCATTCCCCCCAGGCGATATCGAAGCACTGCTCTCTGGCAACAAATACATCAAACAATTGAT
CCCGGCAGTCGTCAACCTGGTATATAAGAAGATTCTCCAATATGACATCACATCCCGCGCCTTCCACACACGGAC
AACAGTCGACGAGACCGAACCCGAGGAGGGCTACCTCCAGGAAGACACACCGAAAATTCAGCGCCGCAAGCTGTT
CCTGCGCTGGTACCTGACGCGTCTATGCCAGGACCCGACAACAATGGAATTCTGGCGGTACTTGAACAAAGTTGG
GTAAGTTCAGCCCTATCCGTTCCCAGATTTCCGTTCCCGGCGTGAGATTATCGTGCAACGCTAACCTGATGTGTA
ACACAGCATGATGCACAGCGGACAAGTACGCAGAACACCTCTCAACATCGAGTACATTCACCTCGGCGTATGCCT
GGGCTACATCCAAGATATCTGGATCGAAGCCATGCTATCCCACCCACACCTGTCGCTGCGACGCAAGATCGCGCT
CGTGCGCGCCGTCAACAAGATCCTCTGGATCCAGAACGATCTCTTCGCCCGGTATCACTCTAGCGACGGTGAAGA
GTTCGCCGACGAGATGTCCATGTTCAACTATACCGAGGATCAGGAGGGATATCTCGGCGAAAAGCGCATTCTCGG
CAGCAGCTCCGGTAGCTCGACCGAGGATGACCGGTCCAGTATTTCTAGCGGTATAGCGCCCTCTATAGATGGTGT
GGCGCCTTCCATACACAGTGTGGCGCCGTCCATACAAAGCGCGTCCACTGCGCCGAAGGGATCGGCGTGTCCCTT
CGCAGAGATGGCCAAGGGCAGCAATTCGACCGAGACGAAGATTTGGGCCAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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