Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4921.t1
Gene name
Locationscaffold_11:67638..68313
Strand+
Gene length (bp)675
Transcript length (bp)624
Coding sequence length (bp)624
Protein length (aa) 208

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08592 DUF1772 Domain of unknown function (DUF1772) 4.5E-28 21 198

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 73 92 19
3 107 129 22
4 184 206 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4921.t1
MATDVRIAQAIGTLGSAVGAGGIASLSIISIPNLIIPARRPPSATLPFHDTPGTSPGHLTHQWLDIYTRGSKIFP
GISAVSSLANLYALWALRDSATPAPDIFGSSWSTCYMLAIGFTMSITPFTLTVMRKTNTKLKAHAKRDDAADAEG
TEGMVVSPQEKAKRAREDGEVVELLQHWSQLNLIRAVFPLIGAGIGFYTAVSSWMIP*
Coding >Pro_DTO377G3_2|g4921.t1
ATGGCCACCGACGTGAGAATCGCCCAGGCAATAGGGACGCTTGGCTCTGCAGTGGGAGCAGGCGGCATTGCTTCA
TTATCCATAATAAGCATCCCCAATCTCATAATTCCAGCCCGTCGCCCACCCAGCGCGACCCTGCCATTCCATGAT
ACCCCAGGAACCTCGCCCGGCCATTTGACACACCAGTGGCTCGATATATATACTCGTGGAAGCAAGATTTTCCCC
GGTATATCCGCGGTATCTTCACTTGCAAACCTGTATGCGCTCTGGGCATTGCGGGACTCCGCTACCCCTGCGCCG
GATATCTTTGGGTCCAGCTGGTCCACGTGCTATATGCTTGCTATCGGGTTTACGATGAGCATTACGCCTTTTACT
CTTACAGTTATGAGAAAGACAAATACCAAGCTGAAGGCTCATGCAAAGCGCGATGATGCGGCTGACGCTGAGGGT
ACCGAGGGCATGGTAGTTAGTCCACAAGAGAAGGCGAAGCGGGCTAGGGAGGATGGCGAGGTGGTTGAACTTCTG
CAGCATTGGTCGCAGTTGAATTTGATCAGAGCTGTGTTTCCACTCATTGGAGCTGGCATTGGGTTCTATACTGCT
GTCTCTAGCTGGATGATTCCTTAA
Transcript >Pro_DTO377G3_2|g4921.t1
ATGGCCACCGACGTGAGAATCGCCCAGGCAATAGGGACGCTTGGCTCTGCAGTGGGAGCAGGCGGCATTGCTTCA
TTATCCATAATAAGCATCCCCAATCTCATAATTCCAGCCCGTCGCCCACCCAGCGCGACCCTGCCATTCCATGAT
ACCCCAGGAACCTCGCCCGGCCATTTGACACACCAGTGGCTCGATATATATACTCGTGGAAGCAAGATTTTCCCC
GGTATATCCGCGGTATCTTCACTTGCAAACCTGTATGCGCTCTGGGCATTGCGGGACTCCGCTACCCCTGCGCCG
GATATCTTTGGGTCCAGCTGGTCCACGTGCTATATGCTTGCTATCGGGTTTACGATGAGCATTACGCCTTTTACT
CTTACAGTTATGAGAAAGACAAATACCAAGCTGAAGGCTCATGCAAAGCGCGATGATGCGGCTGACGCTGAGGGT
ACCGAGGGCATGGTAGTTAGTCCACAAGAGAAGGCGAAGCGGGCTAGGGAGGATGGCGAGGTGGTTGAACTTCTG
CAGCATTGGTCGCAGTTGAATTTGATCAGAGCTGTGTTTCCACTCATTGGAGCTGGCATTGGGTTCTATACTGCT
GTCTCTAGCTGGATGATTCCTTAA
Gene >Pro_DTO377G3_2|g4921.t1
ATGGCCACCGACGTGAGAATCGCCCAGGCAATAGGGACGCTTGGCTCTGCAGTGGGAGCAGGTAAGTAGCACTGC
CTACGCAACAGATGGCCAGACACTCATAGTGTACAAGGCGGCATTGCTTCATTATCCATAATAAGCATCCCCAAT
CTCATAATTCCAGCCCGTCGCCCACCCAGCGCGACCCTGCCATTCCATGATACCCCAGGAACCTCGCCCGGCCAT
TTGACACACCAGTGGCTCGATATATATACTCGTGGAAGCAAGATTTTCCCCGGTATATCCGCGGTATCTTCACTT
GCAAACCTGTATGCGCTCTGGGCATTGCGGGACTCCGCTACCCCTGCGCCGGATATCTTTGGGTCCAGCTGGTCC
ACGTGCTATATGCTTGCTATCGGGTTTACGATGAGCATTACGCCTTTTACTCTTACAGTTATGAGAAAGACAAAT
ACCAAGCTGAAGGCTCATGCAAAGCGCGATGATGCGGCTGACGCTGAGGGTACCGAGGGCATGGTAGTTAGTCCA
CAAGAGAAGGCGAAGCGGGCTAGGGAGGATGGCGAGGTGGTTGAACTTCTGCAGCATTGGTCGCAGTTGAATTTG
ATCAGAGCTGTGTTTCCACTCATTGGAGCTGGCATTGGGTTCTATACTGCTGTCTCTAGCTGGATGATTCCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail