Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g492.t1
Gene name
Locationscaffold_01:1252558..1253887
Strand-
Gene length (bp)1329
Transcript length (bp)1329
Coding sequence length (bp)1329
Protein length (aa) 443

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01588 tRNA_bind Putative tRNA binding domain 6.4E-21 248 363

GO

GO Term Description Terminal node
GO:0000049 tRNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003723 RNA binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g492.t1
MATAAAPETSLLSLLYRSYPAVISSESTEPDYLHASAKIFPQVTLNEEEEADIRQWLHTVSGLKTSLANDQKDVT
AEILDQLNIHLTTRTTLLGAKPSVADIAIYALLAPVVEKWTPEQRTGEKGYHHIVRHVDFVQNGRLFSLKIPDEE
KIAIDVNDVKFVPKPVDPKEEKERKKREKASAQNPDANNESKPLVVGQGKAEQAAKAQVGADGAPVKTNKKEKKE
KKEKAPKPAPAPAAPPAPSLIDLRVGHILRAINHPNADSLYVSTVDCGDAPGSENTSLDEETGKTVRTVCSGLNG
LIPLEEMQGRKIVAVCNLKPVTMRGVKSCAMVLAASPRVAEGEDSHAGPIELVNPPADAPAGERISFEGWNDGQP
EKQLNPKKKIWETFQPGFTTTADREVVFDSSAVPAVHGQEGKPALGKLVAASGGICTVKSLANATVR*
Coding >Pro_DTO377G3_2|g492.t1
ATGGCGACGGCAGCAGCTCCTGAGACATCTCTCCTCTCCCTTCTCTATCGGTCGTACCCCGCCGTAATCTCTTCC
GAATCGACCGAGCCTGACTACCTCCACGCCTCCGCCAAGATCTTCCCTCAGGTCACCTTGAATGAGGAAGAGGAA
GCTGACATCAGGCAATGGCTCCACACCGTCTCCGGCCTGAAGACTTCTCTCGCCAATGACCAAAAGGATGTGACC
GCTGAGATCCTCGACCAGCTGAATATTCACCTCACCACCCGTACCACCCTCCTCGGTGCGAAGCCCTCGGTGGCC
GACATTGCCATCTATGCTCTTCTAGCCCCCGTCGTTGAGAAATGGACACCTGAACAGCGCACCGGAGAAAAGGGC
TACCACCACATTGTGCGTCACGTCGACTTCGTGCAGAACGGCCGCCTATTCTCGCTCAAGATCCCCGATGAGGAG
AAGATCGCCATCGACGTGAACGACGTCAAGTTCGTGCCCAAGCCCGTCGACCCCAAGGAGGAGAAAGAGCGCAAG
AAGCGGGAGAAGGCTAGCGCCCAGAACCCCGACGCCAACAACGAGTCCAAGCCCCTCGTCGTCGGCCAAGGCAAG
GCCGAGCAAGCCGCCAAAGCTCAGGTCGGCGCCGACGGCGCCCCCGTGAAGACCAACAAGAAGGAAAAGAAGGAG
AAGAAAGAGAAGGCACCCAAGCCCGCTCCTGCCCCCGCTGCGCCACCAGCCCCATCACTGATTGACCTGCGCGTC
GGACACATCCTGCGTGCGATCAACCACCCGAACGCGGACTCGCTGTACGTGTCCACGGTCGACTGCGGTGACGCC
CCAGGAAGCGAGAACACGTCTCTCGATGAGGAGACCGGCAAGACCGTGCGGACCGTGTGTTCCGGACTGAACGGA
CTGATCCCGCTTGAGGAGATGCAGGGCCGTAAGATCGTTGCTGTGTGCAACCTAAAGCCTGTGACCATGCGCGGT
GTCAAGTCTTGCGCGATGGTTCTCGCTGCGTCTCCGCGTGTTGCGGAGGGCGAGGACTCGCACGCCGGTCCTATC
GAGCTCGTTAACCCGCCTGCTGATGCTCCTGCCGGTGAGCGGATTAGCTTTGAGGGCTGGAATGATGGCCAGCCT
GAGAAGCAGCTTAACCCGAAGAAGAAGATCTGGGAGACTTTCCAACCGGGTTTCACTACCACTGCGGACCGTGAG
GTCGTCTTTGATAGCAGTGCTGTTCCCGCTGTCCATGGACAGGAGGGTAAGCCTGCTCTTGGAAAGCTGGTTGCT
GCTTCCGGTGGTATTTGTACTGTTAAGAGCTTGGCCAATGCTACTGTGCGGTAG
Transcript >Pro_DTO377G3_2|g492.t1
ATGGCGACGGCAGCAGCTCCTGAGACATCTCTCCTCTCCCTTCTCTATCGGTCGTACCCCGCCGTAATCTCTTCC
GAATCGACCGAGCCTGACTACCTCCACGCCTCCGCCAAGATCTTCCCTCAGGTCACCTTGAATGAGGAAGAGGAA
GCTGACATCAGGCAATGGCTCCACACCGTCTCCGGCCTGAAGACTTCTCTCGCCAATGACCAAAAGGATGTGACC
GCTGAGATCCTCGACCAGCTGAATATTCACCTCACCACCCGTACCACCCTCCTCGGTGCGAAGCCCTCGGTGGCC
GACATTGCCATCTATGCTCTTCTAGCCCCCGTCGTTGAGAAATGGACACCTGAACAGCGCACCGGAGAAAAGGGC
TACCACCACATTGTGCGTCACGTCGACTTCGTGCAGAACGGCCGCCTATTCTCGCTCAAGATCCCCGATGAGGAG
AAGATCGCCATCGACGTGAACGACGTCAAGTTCGTGCCCAAGCCCGTCGACCCCAAGGAGGAGAAAGAGCGCAAG
AAGCGGGAGAAGGCTAGCGCCCAGAACCCCGACGCCAACAACGAGTCCAAGCCCCTCGTCGTCGGCCAAGGCAAG
GCCGAGCAAGCCGCCAAAGCTCAGGTCGGCGCCGACGGCGCCCCCGTGAAGACCAACAAGAAGGAAAAGAAGGAG
AAGAAAGAGAAGGCACCCAAGCCCGCTCCTGCCCCCGCTGCGCCACCAGCCCCATCACTGATTGACCTGCGCGTC
GGACACATCCTGCGTGCGATCAACCACCCGAACGCGGACTCGCTGTACGTGTCCACGGTCGACTGCGGTGACGCC
CCAGGAAGCGAGAACACGTCTCTCGATGAGGAGACCGGCAAGACCGTGCGGACCGTGTGTTCCGGACTGAACGGA
CTGATCCCGCTTGAGGAGATGCAGGGCCGTAAGATCGTTGCTGTGTGCAACCTAAAGCCTGTGACCATGCGCGGT
GTCAAGTCTTGCGCGATGGTTCTCGCTGCGTCTCCGCGTGTTGCGGAGGGCGAGGACTCGCACGCCGGTCCTATC
GAGCTCGTTAACCCGCCTGCTGATGCTCCTGCCGGTGAGCGGATTAGCTTTGAGGGCTGGAATGATGGCCAGCCT
GAGAAGCAGCTTAACCCGAAGAAGAAGATCTGGGAGACTTTCCAACCGGGTTTCACTACCACTGCGGACCGTGAG
GTCGTCTTTGATAGCAGTGCTGTTCCCGCTGTCCATGGACAGGAGGGTAAGCCTGCTCTTGGAAAGCTGGTTGCT
GCTTCCGGTGGTATTTGTACTGTTAAGAGCTTGGCCAATGCTACTGTGCGGTAG
Gene >Pro_DTO377G3_2|g492.t1
ATGGCGACGGCAGCAGCTCCTGAGACATCTCTCCTCTCCCTTCTCTATCGGTCGTACCCCGCCGTAATCTCTTCC
GAATCGACCGAGCCTGACTACCTCCACGCCTCCGCCAAGATCTTCCCTCAGGTCACCTTGAATGAGGAAGAGGAA
GCTGACATCAGGCAATGGCTCCACACCGTCTCCGGCCTGAAGACTTCTCTCGCCAATGACCAAAAGGATGTGACC
GCTGAGATCCTCGACCAGCTGAATATTCACCTCACCACCCGTACCACCCTCCTCGGTGCGAAGCCCTCGGTGGCC
GACATTGCCATCTATGCTCTTCTAGCCCCCGTCGTTGAGAAATGGACACCTGAACAGCGCACCGGAGAAAAGGGC
TACCACCACATTGTGCGTCACGTCGACTTCGTGCAGAACGGCCGCCTATTCTCGCTCAAGATCCCCGATGAGGAG
AAGATCGCCATCGACGTGAACGACGTCAAGTTCGTGCCCAAGCCCGTCGACCCCAAGGAGGAGAAAGAGCGCAAG
AAGCGGGAGAAGGCTAGCGCCCAGAACCCCGACGCCAACAACGAGTCCAAGCCCCTCGTCGTCGGCCAAGGCAAG
GCCGAGCAAGCCGCCAAAGCTCAGGTCGGCGCCGACGGCGCCCCCGTGAAGACCAACAAGAAGGAAAAGAAGGAG
AAGAAAGAGAAGGCACCCAAGCCCGCTCCTGCCCCCGCTGCGCCACCAGCCCCATCACTGATTGACCTGCGCGTC
GGACACATCCTGCGTGCGATCAACCACCCGAACGCGGACTCGCTGTACGTGTCCACGGTCGACTGCGGTGACGCC
CCAGGAAGCGAGAACACGTCTCTCGATGAGGAGACCGGCAAGACCGTGCGGACCGTGTGTTCCGGACTGAACGGA
CTGATCCCGCTTGAGGAGATGCAGGGCCGTAAGATCGTTGCTGTGTGCAACCTAAAGCCTGTGACCATGCGCGGT
GTCAAGTCTTGCGCGATGGTTCTCGCTGCGTCTCCGCGTGTTGCGGAGGGCGAGGACTCGCACGCCGGTCCTATC
GAGCTCGTTAACCCGCCTGCTGATGCTCCTGCCGGTGAGCGGATTAGCTTTGAGGGCTGGAATGATGGCCAGCCT
GAGAAGCAGCTTAACCCGAAGAAGAAGATCTGGGAGACTTTCCAACCGGGTTTCACTACCACTGCGGACCGTGAG
GTCGTCTTTGATAGCAGTGCTGTTCCCGCTGTCCATGGACAGGAGGGTAAGCCTGCTCTTGGAAAGCTGGTTGCT
GCTTCCGGTGGTATTTGTACTGTTAAGAGCTTGGCCAATGCTACTGTGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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