Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4906.t1
Gene name
Locationscaffold_11:29689..30452
Strand-
Gene length (bp)763
Transcript length (bp)447
Coding sequence length (bp)447
Protein length (aa) 149

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01248 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5.4E-27 32 126

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4906.t1
MSDGEEPTSPIAPAEEVEVSADAGSGQMSVLDALKGVLRVSLIHDGLARGLREAAKALDRREAHMCVLNEGCEEE
AYKKLVVALCSEHKIPLIKVPDGKMLGEWVGLCTLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQTEQ*
Coding >Pro_DTO377G3_2|g4906.t1
ATGTCGGACGGAGAAGAGCCCACATCCCCCATTGCCCCCGCCGAGGAGGTCGAGGTTTCTGCCGATGCCGGTAGC
GGCCAGATGTCCGTCTTGGACGCCCTCAAGGGTGTTCTGCGCGTCTCCCTGATCCACGATGGTCTTGCCCGTGGT
CTCCGTGAGGCCGCCAAGGCCCTCGACCGCCGTGAGGCCCACATGTGTGTCCTGAACGAGGGCTGCGAGGAGGAG
GCTTACAAGAAGCTTGTTGTCGCTCTCTGCTCCGAGCACAAGATTCCCCTCATCAAGGTTCCTGACGGAAAGATG
CTTGGCGAGTGGGTTGGTCTCTGCACTCTCGACCGTGAGGGTAACGCCCGCAAGGTTGTCAACTGCTCTTGCGTC
GTTGTCAAGGATTGGGGTGAGGAGTCCCAGGAGCGCTCCGTTCTCCTCAACTACTTCCAGACCGAGCAATAG
Transcript >Pro_DTO377G3_2|g4906.t1
ATGTCGGACGGAGAAGAGCCCACATCCCCCATTGCCCCCGCCGAGGAGGTCGAGGTTTCTGCCGATGCCGGTAGC
GGCCAGATGTCCGTCTTGGACGCCCTCAAGGGTGTTCTGCGCGTCTCCCTGATCCACGATGGTCTTGCCCGTGGT
CTCCGTGAGGCCGCCAAGGCCCTCGACCGCCGTGAGGCCCACATGTGTGTCCTGAACGAGGGCTGCGAGGAGGAG
GCTTACAAGAAGCTTGTTGTCGCTCTCTGCTCCGAGCACAAGATTCCCCTCATCAAGGTTCCTGACGGAAAGATG
CTTGGCGAGTGGGTTGGTCTCTGCACTCTCGACCGTGAGGGTAACGCCCGCAAGGTTGTCAACTGCTCTTGCGTC
GTTGTCAAGGATTGGGGTGAGGAGTCCCAGGAGCGCTCCGTTCTCCTCAACTACTTCCAGACCGAGCAATAG
Gene >Pro_DTO377G3_2|g4906.t1
ATGGTATGTTTTATACCTGCGAATTACCCTCACACTATATCCGTACCCACCCTGCATCCTGTCACGACAATTGAG
ACGCTGGAATGGACATGGCCGGCGAGAGCAATTGCGTCGCCGCAGTAGAGGTCACCCTCGTCGGATGTTTAATCT
ATACGCTGCACCGGTCCAAACTAATCCCAAGTCTCAAGAGTCACGACAAAGATCTACACAATGGAACCTTTGAAG
CACCATATACTAATAAGAATCCTTAGTCGGACGGAGAAGAGCCCACATCCCCCATTGCCCCCGCCGAGGAGGTCG
AGGTTTCTGCCGATGCCGGTAGCGGCCAGATGTCCGTCTTGGACGCCCTCAAGGGTGTTCTGCGCGTCTCCCTGA
TCCACGATGGTCTTGCCCGTGGTCTCCGTGAGGCCGCCAAGGCCCTCGACCGCCGTGAGGCCCACATGTGTGTCC
TGAACGAGGGCTGCGAGGAGGAGGCTTACAAGAAGCTTGTTGTCGCTCTCTGCTCCGAGCACAAGATTCCCCTCA
TCAAGGTTCCTGACGGAAAGATGCTTGGCGAGTGGGTTGGTCTCTGTATGTTCTCCCTCTATTGATGTAGGCTAT
TCATCTCGGGGTATGTTTGCTAACATTTTGTTCTTCAGGCACTCTCGACCGTGAGGGTAACGCCCGCAAGGTTGT
CAACTGCTCTTGCGTCGTTGTCAAGGATTGGGGTGAGGAGTCCCAGGAGCGCTCCGTTCTCCTCAACTACTTCCA
GACCGAGCAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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