© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g4904.t1 |
| Gene name | |
| Location | scaffold_11:22672..23725 |
| Strand | + |
| Gene length (bp) | 1053 |
| Transcript length (bp) | 1053 |
| Coding sequence length (bp) | 1053 |
| Protein length (aa) | 351 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03060 | NMO | Nitronate monooxygenase | 7.5E-07 | 15 | 59 |
| PF03060 | NMO | Nitronate monooxygenase | 1.5E-28 | 132 | 239 |
| PF00478 | IMPDH | IMP dehydrogenase / GMP reductase domain | 1.0E-08 | 14 | 249 |
| PF01070 | FMN_dh | FMN-dependent dehydrogenase | 3.8E-07 | 176 | 234 |
| PF01645 | Glu_synthase | Conserved region in glutamate synthase | 5.6E-06 | 80 | 226 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0018580 | nitronate monooxygenase activity | Yes |
| GO:0015930 | glutamate synthase activity | Yes |
| GO:0006537 | glutamate biosynthetic process | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | Yes |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0019752 | carboxylic acid metabolic process | No |
| GO:1901607 | alpha-amino acid biosynthetic process | No |
| GO:0043648 | dicarboxylic acid metabolic process | No |
| GO:1901605 | alpha-amino acid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0004497 | monooxygenase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0006520 | cellular amino acid metabolic process | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:0009084 | glutamine family amino acid biosynthetic process | No |
| GO:0046394 | carboxylic acid biosynthetic process | No |
| GO:0009064 | glutamine family amino acid metabolic process | No |
| GO:0016053 | organic acid biosynthetic process | No |
| GO:0006536 | glutamate metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | No |
| GO:0044283 | small molecule biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0008652 | cellular amino acid biosynthetic process | No |
| GO:0043650 | dicarboxylic acid biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4904.t1 MAASLLSRYPWVSTPFVVSAPMKVMSGPALAVAVSRAGGLGFIGPGAKTQDTSDDLEKASSLIHQEAGIKPTPGS TLPVGIGYQLWADDINVAVAAIEKYKPCAAWLYAPRQGPKEYDDWSRKIRQVSPDTQIWIQIGTLKEAKELLLNS ERPDVIVLQGAESGGHGRAKDGMGLMALFPEVADAMSGSQIPLFAAGGIADGRGVAAALCLGASGVVMGTRFLAA SEARISQGYQDEVVRAVDGAASTTRTLLYNHLRGTFGWPEQYSPRTIVNKSFVERQEGKPFEELRRLHDEAAKTG DNGWGPEGRLATYAGASVGLIHGVKPAEDIVREIREDALERIQRLCPRKE* |
| Coding | >Pro_DTO377G3_2|g4904.t1 ATGGCGGCAAGCTTGCTATCGCGATACCCATGGGTATCTACTCCATTCGTGGTCAGCGCACCTATGAAAGTAATG TCCGGTCCAGCATTGGCAGTAGCCGTCTCTCGCGCTGGTGGGCTAGGGTTCATTGGCCCCGGTGCCAAAACACAG GATACAAGTGATGATCTCGAGAAAGCATCATCGCTCATACACCAAGAGGCCGGCATAAAACCAACTCCCGGCTCG ACACTGCCTGTCGGCATAGGATACCAGCTCTGGGCTGACGACATCAATGTTGCCGTCGCCGCTATCGAAAAGTAT AAACCATGTGCAGCCTGGCTATACGCTCCACGCCAGGGACCCAAGGAATACGACGACTGGTCTCGCAAGATCCGC CAAGTATCCCCTGACACCCAAATCTGGATTCAAATTGGCACTCTGAAGGAGGCGAAGGAGCTTCTTCTGAACAGT GAGCGACCAGATGTCATTGTCCTGCAAGGAGCTGAATCTGGTGGCCATGGTCGGGCGAAAGACGGAATGGGGCTT ATGGCACTGTTTCCCGAAGTGGCAGATGCCATGTCAGGCAGCCAAATTCCTTTGTTTGCAGCTGGCGGAATCGCA GATGGGCGCGGTGTTGCAGCGGCTTTGTGCCTTGGAGCTTCGGGCGTGGTGATGGGGACTCGATTCCTGGCTGCT AGTGAAGCACGCATTAGCCAGGGCTACCAGGACGAGGTTGTACGTGCGGTCGATGGTGCGGCCTCAACCACGCGT ACGCTACTATATAATCACCTCCGAGGCACTTTCGGGTGGCCGGAGCAATATAGTCCCCGGACTATCGTGAACAAA TCATTTGTTGAGCGGCAGGAAGGGAAGCCCTTCGAGGAACTGAGAAGACTTCATGATGAGGCTGCTAAGACGGGC GATAACGGCTGGGGGCCTGAAGGGAGACTTGCGACATATGCAGGAGCCTCTGTGGGACTGATACATGGTGTGAAA CCTGCAGAAGATATTGTCCGCGAAATTCGAGAGGATGCATTGGAAAGAATTCAGCGGCTGTGTCCCCGAAAGGAG TAA |
| Transcript | >Pro_DTO377G3_2|g4904.t1 ATGGCGGCAAGCTTGCTATCGCGATACCCATGGGTATCTACTCCATTCGTGGTCAGCGCACCTATGAAAGTAATG TCCGGTCCAGCATTGGCAGTAGCCGTCTCTCGCGCTGGTGGGCTAGGGTTCATTGGCCCCGGTGCCAAAACACAG GATACAAGTGATGATCTCGAGAAAGCATCATCGCTCATACACCAAGAGGCCGGCATAAAACCAACTCCCGGCTCG ACACTGCCTGTCGGCATAGGATACCAGCTCTGGGCTGACGACATCAATGTTGCCGTCGCCGCTATCGAAAAGTAT AAACCATGTGCAGCCTGGCTATACGCTCCACGCCAGGGACCCAAGGAATACGACGACTGGTCTCGCAAGATCCGC CAAGTATCCCCTGACACCCAAATCTGGATTCAAATTGGCACTCTGAAGGAGGCGAAGGAGCTTCTTCTGAACAGT GAGCGACCAGATGTCATTGTCCTGCAAGGAGCTGAATCTGGTGGCCATGGTCGGGCGAAAGACGGAATGGGGCTT ATGGCACTGTTTCCCGAAGTGGCAGATGCCATGTCAGGCAGCCAAATTCCTTTGTTTGCAGCTGGCGGAATCGCA GATGGGCGCGGTGTTGCAGCGGCTTTGTGCCTTGGAGCTTCGGGCGTGGTGATGGGGACTCGATTCCTGGCTGCT AGTGAAGCACGCATTAGCCAGGGCTACCAGGACGAGGTTGTACGTGCGGTCGATGGTGCGGCCTCAACCACGCGT ACGCTACTATATAATCACCTCCGAGGCACTTTCGGGTGGCCGGAGCAATATAGTCCCCGGACTATCGTGAACAAA TCATTTGTTGAGCGGCAGGAAGGGAAGCCCTTCGAGGAACTGAGAAGACTTCATGATGAGGCTGCTAAGACGGGC GATAACGGCTGGGGGCCTGAAGGGAGACTTGCGACATATGCAGGAGCCTCTGTGGGACTGATACATGGTGTGAAA CCTGCAGAAGATATTGTCCGCGAAATTCGAGAGGATGCATTGGAAAGAATTCAGCGGCTGTGTCCCCGAAAGGAG TAA |
| Gene | >Pro_DTO377G3_2|g4904.t1 ATGGCGGCAAGCTTGCTATCGCGATACCCATGGGTATCTACTCCATTCGTGGTCAGCGCACCTATGAAAGTAATG TCCGGTCCAGCATTGGCAGTAGCCGTCTCTCGCGCTGGTGGGCTAGGGTTCATTGGCCCCGGTGCCAAAACACAG GATACAAGTGATGATCTCGAGAAAGCATCATCGCTCATACACCAAGAGGCCGGCATAAAACCAACTCCCGGCTCG ACACTGCCTGTCGGCATAGGATACCAGCTCTGGGCTGACGACATCAATGTTGCCGTCGCCGCTATCGAAAAGTAT AAACCATGTGCAGCCTGGCTATACGCTCCACGCCAGGGACCCAAGGAATACGACGACTGGTCTCGCAAGATCCGC CAAGTATCCCCTGACACCCAAATCTGGATTCAAATTGGCACTCTGAAGGAGGCGAAGGAGCTTCTTCTGAACAGT GAGCGACCAGATGTCATTGTCCTGCAAGGAGCTGAATCTGGTGGCCATGGTCGGGCGAAAGACGGAATGGGGCTT ATGGCACTGTTTCCCGAAGTGGCAGATGCCATGTCAGGCAGCCAAATTCCTTTGTTTGCAGCTGGCGGAATCGCA GATGGGCGCGGTGTTGCAGCGGCTTTGTGCCTTGGAGCTTCGGGCGTGGTGATGGGGACTCGATTCCTGGCTGCT AGTGAAGCACGCATTAGCCAGGGCTACCAGGACGAGGTTGTACGTGCGGTCGATGGTGCGGCCTCAACCACGCGT ACGCTACTATATAATCACCTCCGAGGCACTTTCGGGTGGCCGGAGCAATATAGTCCCCGGACTATCGTGAACAAA TCATTTGTTGAGCGGCAGGAAGGGAAGCCCTTCGAGGAACTGAGAAGACTTCATGATGAGGCTGCTAAGACGGGC GATAACGGCTGGGGGCCTGAAGGGAGACTTGCGACATATGCAGGAGCCTCTGTGGGACTGATACATGGTGTGAAA CCTGCAGAAGATATTGTCCGCGAAATTCGAGAGGATGCATTGGAAAGAATTCAGCGGCTGTGTCCCCGAAAGGAG TAA |