Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4897.t1
Gene name
Locationscaffold_11:3538..5225
Strand+
Gene length (bp)1687
Transcript length (bp)1584
Coding sequence length (bp)1584
Protein length (aa) 528

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03221 HTH_Tnp_Tc5 Tc5 transposase DNA-binding domain 1.1E-13 187 247
PF04218 CENP-B_N CENP-B N-terminal DNA-binding domain 1.2E-04 120 169

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Centromere protein B, DNA-binding region

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4897.t1
MEEPAMETETHHEPESEFPHSPWVEIGSFASPQHSPPMHEYSGFDYGSSQLMAVDSYGMSVPPPYASMPLPMPSH
SWPSMLTTHSPFVASGLPASTTPTSVSPSATMCPVRKTSTGGTTPRRTLTDDDRRQMCIYHEENKTAKQTDIGAL
FGVERSTVSKVLRQKEKYLNPEDGSRSPIKRAKGRVPDIERALSNWAKNLHSQGHPLSDEMIKEKALFFASICGC
PEGKEKVSTAAWLEKFKQKNNLLGAKMRRGSTGIRSCSNSPIQLNTEFGSALRSPGSHSPTSSIDSFGSPLSPTS
QERNKHDMAELPDLTGGYQHGYSNSTTSLDTSSAGMVSPTTPTSQSRLPFTNSDTNRLHSQTSPPVPIDPTLLSA
DDTTDPHRQKRELQQSLTVSTLQSPLEMDDSKPAMFPVRQTNVIKRNRSNPEITTKYMPPRSKSTTISPVSSPGS
PTQDEARRALELVINYFDHQPAGLAAQEYMTIVKLMERLELARSQAGFLLSGLPRIDEHEDIHIPHVTKKRSIHN
LG*
Coding >Pro_DTO377G3_2|g4897.t1
ATGGAGGAGCCCGCCATGGAAACGGAGACTCATCATGAGCCAGAGAGCGAATTCCCCCATTCGCCATGGGTGGAG
ATAGGCTCATTTGCTTCTCCTCAGCACTCGCCCCCCATGCACGAATATAGTGGGTTCGACTACGGCTCATCGCAG
CTCATGGCTGTGGACTCGTATGGCATGTCAGTTCCGCCGCCCTACGCCTCCATGCCCCTACCCATGCCTTCGCAT
TCCTGGCCTAGCATGCTCACGACACACTCTCCGTTTGTTGCGTCTGGATTACCTGCTTCTACCACCCCGACATCG
GTGTCACCTTCGGCTACCATGTGTCCGGTGCGAAAGACCTCCACTGGAGGGACTACGCCGCGCAGGACACTTACC
GACGATGATCGCCGGCAAATGTGTATATATCATGAGGAAAACAAGACTGCAAAGCAGACTGATATTGGAGCGTTG
TTTGGAGTCGAGAGAAGCACTGTTTCCAAAGTCCTTCGCCAGAAGGAAAAGTATCTAAACCCTGAAGATGGGAGT
CGGTCTCCTATCAAACGGGCTAAGGGCAGAGTCCCCGATATTGAGAGAGCTCTATCCAACTGGGCAAAGAACCTC
CACAGCCAAGGACATCCCCTAAGCGATGAGATGATCAAAGAGAAAGCACTTTTCTTCGCCAGTATCTGCGGCTGC
CCTGAAGGCAAGGAAAAGGTCTCCACTGCAGCCTGGCTAGAAAAATTCAAGCAGAAGAACAATCTCCTCGGCGCA
AAAATGCGCAGAGGATCTACCGGAATTCGTAGCTGTTCAAACAGCCCAATTCAGCTCAATACAGAGTTCGGGTCT
GCTCTTCGAAGCCCTGGCAGCCACTCGCCCACATCCTCCATTGATAGCTTTGGATCCCCATTGTCCCCAACGAGC
CAAGAAAGAAACAAACACGACATGGCTGAACTGCCCGATCTGACAGGGGGATACCAACACGGATATTCCAACAGC
ACAACCTCACTCGACACTTCTTCGGCGGGTATGGTCAGCCCAACAACACCAACGAGCCAATCCCGTCTCCCGTTC
ACCAACAGCGACACCAACCGACTGCACAGCCAGACCTCCCCTCCCGTCCCCATTGATCCAACCCTCCTATCAGCC
GATGACACCACAGACCCGCATCGCCAAAAGCGCGAACTCCAGCAATCTCTTACGGTCTCCACCCTGCAATCCCCA
CTGGAAATGGACGACTCCAAGCCCGCCATGTTCCCGGTCCGCCAGACAAACGTCATCAAGCGCAATCGCAGCAAC
CCTGAGATCACGACCAAGTACATGCCGCCGCGGTCAAAGTCTACCACCATCTCGCCCGTCAGCTCTCCAGGATCA
CCGACGCAGGACGAGGCCCGTCGCGCCCTTGAACTCGTCATCAACTACTTCGACCATCAGCCTGCTGGTCTGGCG
GCACAGGAGTACATGACCATCGTAAAGCTAATGGAGAGGCTTGAACTTGCCAGGAGCCAGGCTGGCTTTCTGTTG
AGTGGCTTGCCGCGCATTGATGAACATGAGGATATTCATATCCCGCATGTGACGAAGAAGCGGAGCATCCACAAT
TTGGGATGA
Transcript >Pro_DTO377G3_2|g4897.t1
ATGGAGGAGCCCGCCATGGAAACGGAGACTCATCATGAGCCAGAGAGCGAATTCCCCCATTCGCCATGGGTGGAG
ATAGGCTCATTTGCTTCTCCTCAGCACTCGCCCCCCATGCACGAATATAGTGGGTTCGACTACGGCTCATCGCAG
CTCATGGCTGTGGACTCGTATGGCATGTCAGTTCCGCCGCCCTACGCCTCCATGCCCCTACCCATGCCTTCGCAT
TCCTGGCCTAGCATGCTCACGACACACTCTCCGTTTGTTGCGTCTGGATTACCTGCTTCTACCACCCCGACATCG
GTGTCACCTTCGGCTACCATGTGTCCGGTGCGAAAGACCTCCACTGGAGGGACTACGCCGCGCAGGACACTTACC
GACGATGATCGCCGGCAAATGTGTATATATCATGAGGAAAACAAGACTGCAAAGCAGACTGATATTGGAGCGTTG
TTTGGAGTCGAGAGAAGCACTGTTTCCAAAGTCCTTCGCCAGAAGGAAAAGTATCTAAACCCTGAAGATGGGAGT
CGGTCTCCTATCAAACGGGCTAAGGGCAGAGTCCCCGATATTGAGAGAGCTCTATCCAACTGGGCAAAGAACCTC
CACAGCCAAGGACATCCCCTAAGCGATGAGATGATCAAAGAGAAAGCACTTTTCTTCGCCAGTATCTGCGGCTGC
CCTGAAGGCAAGGAAAAGGTCTCCACTGCAGCCTGGCTAGAAAAATTCAAGCAGAAGAACAATCTCCTCGGCGCA
AAAATGCGCAGAGGATCTACCGGAATTCGTAGCTGTTCAAACAGCCCAATTCAGCTCAATACAGAGTTCGGGTCT
GCTCTTCGAAGCCCTGGCAGCCACTCGCCCACATCCTCCATTGATAGCTTTGGATCCCCATTGTCCCCAACGAGC
CAAGAAAGAAACAAACACGACATGGCTGAACTGCCCGATCTGACAGGGGGATACCAACACGGATATTCCAACAGC
ACAACCTCACTCGACACTTCTTCGGCGGGTATGGTCAGCCCAACAACACCAACGAGCCAATCCCGTCTCCCGTTC
ACCAACAGCGACACCAACCGACTGCACAGCCAGACCTCCCCTCCCGTCCCCATTGATCCAACCCTCCTATCAGCC
GATGACACCACAGACCCGCATCGCCAAAAGCGCGAACTCCAGCAATCTCTTACGGTCTCCACCCTGCAATCCCCA
CTGGAAATGGACGACTCCAAGCCCGCCATGTTCCCGGTCCGCCAGACAAACGTCATCAAGCGCAATCGCAGCAAC
CCTGAGATCACGACCAAGTACATGCCGCCGCGGTCAAAGTCTACCACCATCTCGCCCGTCAGCTCTCCAGGATCA
CCGACGCAGGACGAGGCCCGTCGCGCCCTTGAACTCGTCATCAACTACTTCGACCATCAGCCTGCTGGTCTGGCG
GCACAGGAGTACATGACCATCGTAAAGCTAATGGAGAGGCTTGAACTTGCCAGGAGCCAGGCTGGCTTTCTGTTG
AGTGGCTTGCCGCGCATTGATGAACATGAGGATATTCATATCCCGCATGTGACGAAGAAGCGGAGCATCCACAAT
TTGGGATGA
Gene >Pro_DTO377G3_2|g4897.t1
ATGGAGGAGCCCGCCATGGAAACGGAGACTCATCATGAGCCAGAGAGCGAATTCCCCCATTCGCCATGGGTGGAG
ATAGGCTCATTTGCTTCTCCTCAGCACTCGCCCCCCATGCACGAATATAGTGGGTTCGACTACGGCTCATCGCAG
CTCATGGCTGTGGACTCGTATGGCATGTCAGTTCCGCCGCCCTACGCCTCCATGCCCCTACCCATGCCTTCGCAT
TCCTGGCCTAGCATGCTCACGACACACTCTCCGTTTGTTGCGTCTGGATTACCTGCTTCTACCACCCCGACATCG
GTGTCACCTTCGGCTACCATGTGTCCGGTGCGAAAGACCTCCACTGGAGGGACTACGCCGCGCAGGACACTTACC
GACGATGATCGCCGGCAAATGTGTATATATCATGAGGAAAACAAGACTGCAAAGCAGACTGATATTGGAGGTAAG
CATTATCTCTTTTGTCTGTGTTCAGGAACTAGGTTGACTTTGATGTGCAGCGTTGTTTGGAGTCGAGAGAAGGTA
TCATTTCGACCTCGCTTTTTATTTGATTCAATCTAACATATACAGCACTGTTTCCAAAGTCCTTCGCCAGAAGGA
AAAGTATCTAAACCCTGAAGATGGGAGTCGGTCTCCTATCAAACGGGCTAAGGGCAGAGTCCCCGATATTGAGAG
AGCTCTATCCAACTGGGCAAAGAACCTCCACAGCCAAGGACATCCCCTAAGCGATGAGATGATCAAAGAGAAAGC
ACTTTTCTTCGCCAGTATCTGCGGCTGCCCTGAAGGCAAGGAAAAGGTCTCCACTGCAGCCTGGCTAGAAAAATT
CAAGCAGAAGAACAATCTCCTCGGCGCAAAAATGCGCAGAGGATCTACCGGAATTCGTAGCTGTTCAAACAGCCC
AATTCAGCTCAATACAGAGTTCGGGTCTGCTCTTCGAAGCCCTGGCAGCCACTCGCCCACATCCTCCATTGATAG
CTTTGGATCCCCATTGTCCCCAACGAGCCAAGAAAGAAACAAACACGACATGGCTGAACTGCCCGATCTGACAGG
GGGATACCAACACGGATATTCCAACAGCACAACCTCACTCGACACTTCTTCGGCGGGTATGGTCAGCCCAACAAC
ACCAACGAGCCAATCCCGTCTCCCGTTCACCAACAGCGACACCAACCGACTGCACAGCCAGACCTCCCCTCCCGT
CCCCATTGATCCAACCCTCCTATCAGCCGATGACACCACAGACCCGCATCGCCAAAAGCGCGAACTCCAGCAATC
TCTTACGGTCTCCACCCTGCAATCCCCACTGGAAATGGACGACTCCAAGCCCGCCATGTTCCCGGTCCGCCAGAC
AAACGTCATCAAGCGCAATCGCAGCAACCCTGAGATCACGACCAAGTACATGCCGCCGCGGTCAAAGTCTACCAC
CATCTCGCCCGTCAGCTCTCCAGGATCACCGACGCAGGACGAGGCCCGTCGCGCCCTTGAACTCGTCATCAACTA
CTTCGACCATCAGCCTGCTGGTCTGGCGGCACAGGAGTACATGACCATCGTAAAGCTAATGGAGAGGCTTGAACT
TGCCAGGAGCCAGGCTGGCTTTCTGTTGAGTGGCTTGCCGCGCATTGATGAACATGAGGATATTCATATCCCGCA
TGTGACGAAGAAGCGGAGCATCCACAATTTGGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail