Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4894.t1
Gene name
Locationscaffold_10:692639..693683
Strand+
Gene length (bp)1044
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.0E-24 19 224
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.1E-15 25 244
PF01370 Epimerase NAD dependent epimerase/dehydratase family 5.1E-05 21 222

GO

GO Term Description Terminal node
GO:0050662 coenzyme binding Yes
GO:0003824 catalytic activity Yes
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4894.t1
MPSETDEKFSTAQATHVDKVVLVTGVSSGIGVETVRVLASTGATIFGTARNLDKAKEALNDVLDTGHLKLLFMDQ
TDLSSVRACAAEFRKESPKLNILINNAGVMNTPESRTKDGFELQFGTNHLSHFLLFYLLKDILLETSTPTFHSRV
INVSSSGHCYSPIHLDNVNFEGNYNGWIAYGASKTANIYMATQIERLYGTQGLHGYSLHPGAFVSPNLQKYSQEE
MKAAMQDKRALAYLTSIEQGCATTIYGSVSSELEGKGGLYLEGASIAVHPAPSGADGLEYGYSSWGFDESKEREL
WKFSKSWVGVE*
Coding >Pro_DTO377G3_2|g4894.t1
ATGCCGAGCGAAACCGATGAGAAGTTCTCAACGGCCCAGGCGACTCACGTTGACAAGGTTGTTTTGGTCACTGGC
GTTTCATCTGGAATTGGTGTTGAAACTGTGCGCGTCTTGGCATCTACCGGGGCGACTATCTTTGGCACAGCCCGG
AATCTTGACAAGGCGAAGGAAGCCTTGAATGATGTACTCGATACTGGGCATTTGAAGCTTCTTTTCATGGATCAG
ACAGACCTTTCGAGTGTTCGGGCGTGTGCTGCGGAGTTTCGCAAAGAGAGCCCCAAGCTTAATATTCTTATCAAC
AATGCCGGGGTGATGAATACCCCAGAAAGTCGTACTAAAGATGGCTTCGAACTGCAATTTGGAACAAATCACCTA
TCACATTTCCTACTCTTCTATCTACTGAAAGATATCCTACTGGAAACCTCAACGCCTACATTCCATTCTCGTGTT
ATTAATGTTTCCTCGTCGGGCCACTGTTATAGCCCTATCCATTTGGACAATGTTAACTTTGAAGGAAATTATAAT
GGATGGATTGCTTACGGAGCGAGCAAGACGGCTAATATATATATGGCTACCCAAATCGAGCGTTTGTATGGGACG
CAAGGTCTTCATGGCTATAGCTTACATCCTGGGGCCTTCGTGAGCCCCAACCTCCAGAAATACTCACAGGAAGAA
ATGAAAGCAGCGATGCAGGACAAGCGCGCCCTCGCGTATTTGACTAGTATCGAGCAGGGCTGCGCAACGACTATT
TATGGCTCTGTCTCGAGTGAACTGGAAGGGAAAGGCGGATTGTACTTGGAAGGAGCATCTATTGCAGTTCATCCG
GCTCCCTCAGGCGCGGATGGACTAGAATATGGATACAGCAGTTGGGGGTTTGATGAGTCAAAGGAAAGGGAGTTG
TGGAAGTTCAGCAAATCTTGGGTAGGAGTAGAGTAA
Transcript >Pro_DTO377G3_2|g4894.t1
ATGCCGAGCGAAACCGATGAGAAGTTCTCAACGGCCCAGGCGACTCACGTTGACAAGGTTGTTTTGGTCACTGGC
GTTTCATCTGGAATTGGTGTTGAAACTGTGCGCGTCTTGGCATCTACCGGGGCGACTATCTTTGGCACAGCCCGG
AATCTTGACAAGGCGAAGGAAGCCTTGAATGATGTACTCGATACTGGGCATTTGAAGCTTCTTTTCATGGATCAG
ACAGACCTTTCGAGTGTTCGGGCGTGTGCTGCGGAGTTTCGCAAAGAGAGCCCCAAGCTTAATATTCTTATCAAC
AATGCCGGGGTGATGAATACCCCAGAAAGTCGTACTAAAGATGGCTTCGAACTGCAATTTGGAACAAATCACCTA
TCACATTTCCTACTCTTCTATCTACTGAAAGATATCCTACTGGAAACCTCAACGCCTACATTCCATTCTCGTGTT
ATTAATGTTTCCTCGTCGGGCCACTGTTATAGCCCTATCCATTTGGACAATGTTAACTTTGAAGGAAATTATAAT
GGATGGATTGCTTACGGAGCGAGCAAGACGGCTAATATATATATGGCTACCCAAATCGAGCGTTTGTATGGGACG
CAAGGTCTTCATGGCTATAGCTTACATCCTGGGGCCTTCGTGAGCCCCAACCTCCAGAAATACTCACAGGAAGAA
ATGAAAGCAGCGATGCAGGACAAGCGCGCCCTCGCGTATTTGACTAGTATCGAGCAGGGCTGCGCAACGACTATT
TATGGCTCTGTCTCGAGTGAACTGGAAGGGAAAGGCGGATTGTACTTGGAAGGAGCATCTATTGCAGTTCATCCG
GCTCCCTCAGGCGCGGATGGACTAGAATATGGATACAGCAGTTGGGGGTTTGATGAGTCAAAGGAAAGGGAGTTG
TGGAAGTTCAGCAAATCTTGGGTAGGAGTAGAGTAA
Gene >Pro_DTO377G3_2|g4894.t1
ATGCCGAGCGAAACCGATGAGAAGTTCTCAACGGCCCAGGCGACTCACGTGTAACTGGAATTCAAATCATCCAAG
ATGAAGGTCTAGTTAACAAATGGAGTGACAAGGTTGTTTTGGTCACTGGCGTTTCATCTGGAATTGGTGTTGAAA
CTGTGCGCGTCTTGGCATCTACCGGGGCGACTATCTTTGGCACAGCCCGGAATCTTGACAAGGCGAAGGAAGCCT
TGAATGATGTACTCGATACTGGGCATTTGAAGCTTCTTTTCATGGATCAGACAGACCTTTCGAGTGTTCGGGCGT
GTGCTGCGGAGTTTCGCAAAGAGAGCCCCAAGCTTAATATTCTTATCAACAATGCCGGGGTAAGCTAGTCGAAAC
AAATTTCTCAAAGATCGTCCGCCCACTATTTGATCGTTATAGGTGATGAATACCCCAGAAAGTCGTACTAAAGAT
GGCTTCGAACTGCAATTTGGAACAAATCACCTATCACATTTCCTACTCTTCTATCTACTGAAAGATATCCTACTG
GAAACCTCAACGCCTACATTCCATTCTCGTGTTATTAATGTTTCCTCGTCGGGCCACTGTTATAGCCCTATCCAT
TTGGACAATGTTAACTTTGAAGGAAATTATAATGGATGGATTGCTTACGGAGCGAGCAAGACGGCTAATATATAT
ATGGCTACCCAAATCGAGCGTTTGTATGGGACGCAAGGTCTTCATGGCTATAGCTTACATCCTGGGGCCTTCGTG
AGCCCCAACCTCCAGAAATACTCACAGGAAGAAATGAAAGCAGCGATGCAGGACAAGCGCGCCCTCGCGTATTTG
ACTAGTATCGAGCAGGGCTGCGCAACGACTATTTATGGCTCTGTCTCGAGTGAACTGGAAGGGAAAGGCGGATTG
TACTTGGAAGGAGCATCTATTGCAGTTCATCCGGCTCCCTCAGGCGCGGATGGACTAGAATATGGATACAGCAGT
TGGGGGTTTGATGAGTCAAAGGAAAGGGAGTTGTGGAAGTTCAGCAAATCTTGGGTAGGAGTAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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