Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g4890.t1
Gene name
Location	scaffold_10:685328..686369
Strand	+
Gene length (bp)	1041
Transcript length (bp)	1041
Coding sequence length (bp)	1041
Protein length (aa)	347

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00877	NLPC_P60	NlpC/P60 family	2.9E-18	231	326

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g4890.t1 MISLLAKQVTLALVWGAANALPSSNASPILDTRSVQPAYVSVAVTTLWTDPSKPRAIDEPALTNPVQMDKWLSMN VSDYSDLTTNSRTQTQALFGARVDIIGHENGWYEVALPGQATPKNALGYPGWVPAAQVSFDQEYGRLLSEKPFAK VEKAATVPLYRDHSLKSKLMEVTYDTRLPVLRETKSAIEVATPGGGSAYLSTHDASVYKSASDIPYPTSLDLINT AKLFLGLPYLWGGMSGYAVDCSGFTHTLYHSHGIDIARDADAQADFTGHGTPVAQADLQPADLMFYASNLSDAST IYHVAMYIGNGEMVEAYDSGTPVRITPARFTDEYWGAERFLKHRKI*
Coding	>Pro_DTO377G3_2\|g4890.t1 ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA
Transcript	>Pro_DTO377G3_2\|g4890.t1 ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA
Gene	>Pro_DTO377G3_2\|g4890.t1 ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA

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