Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4890.t1
Gene name
Locationscaffold_10:685328..686369
Strand+
Gene length (bp)1041
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00877 NLPC_P60 NlpC/P60 family 2.6E-18 231 326

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4890.t1
MISLLAKQVTLALVWGAANALPSSNASPILDTRSVQPAYVSVAVTTLWTDPSKPRAIDEPALTNPVQMDKWLSMN
VSDYSDLTTNSRTQTQALFGARVDIIGHENGWYEVALPGQATPKNALGYPGWVPAAQVSFDQEYGRLLSEKPFAK
VEKAATVPLYRDHSLKSKLMEVTYDTRLPVLRETKSAIEVATPGGGSAYLSTHDASVYKSASDIPYPTSLDLINT
AKLFLGLPYLWGGMSGYAVDCSGFTHTLYHSHGIDIARDADAQADFTGHGTPVAQADLQPADLMFYASNLSDAST
IYHVAMYIGNGEMVEAYDSGTPVRITPARFTDEYWGAERFLKHRKI*
Coding >Pro_DTO377G3_2|g4890.t1
ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT
GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC
CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC
GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC
ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC
GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA
GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC
ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG
TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA
GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG
CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC
ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG
ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC
ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA
Transcript >Pro_DTO377G3_2|g4890.t1
ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT
GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC
CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC
GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC
ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC
GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA
GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC
ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG
TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA
GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG
CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC
ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG
ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC
ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA
Gene >Pro_DTO377G3_2|g4890.t1
ATGATTTCACTTCTTGCAAAACAAGTCACCCTGGCACTGGTCTGGGGTGCTGCCAACGCCCTTCCAAGCTCCAAT
GCAAGCCCTATTCTCGACACCCGCTCCGTGCAGCCTGCCTACGTAAGTGTGGCAGTGACAACATTGTGGACCGAC
CCCAGCAAGCCGCGCGCAATCGATGAGCCGGCACTGACAAACCCGGTGCAAATGGACAAATGGCTTTCTATGAAC
GTGTCCGACTACAGCGACCTCACCACTAATAGCCGGACTCAGACGCAAGCGCTTTTTGGTGCACGAGTGGACATC
ATCGGCCATGAGAATGGTTGGTACGAGGTGGCCCTCCCCGGACAGGCGACCCCAAAGAACGCCCTGGGATATCCC
GGCTGGGTCCCTGCTGCGCAGGTATCGTTTGACCAGGAATACGGACGACTGCTCTCAGAAAAGCCCTTCGCGAAA
GTCGAAAAGGCTGCCACGGTTCCGCTCTACCGCGATCATAGCCTGAAGTCGAAGCTAATGGAAGTCACCTACGAC
ACAAGACTCCCCGTCCTGCGGGAGACAAAATCAGCCATTGAAGTCGCAACTCCCGGTGGTGGCTCGGCTTACTTG
TCCACCCATGATGCTTCCGTCTACAAGTCTGCCTCGGATATTCCTTATCCGACGAGCCTTGACCTGATCAACACA
GCGAAACTGTTCCTTGGCCTTCCTTATCTCTGGGGCGGTATGTCAGGATACGCCGTCGACTGCTCGGGATTCACG
CACACCCTCTACCATTCGCATGGCATTGATATTGCTCGTGACGCTGACGCTCAAGCCGACTTCACTGGTCATGGC
ACCCCTGTCGCGCAGGCGGATTTGCAACCCGCGGATCTCATGTTCTACGCGAGCAACCTCAGTGATGCAAGCACG
ATTTATCACGTTGCGATGTATATCGGAAATGGAGAAATGGTCGAGGCATATGATTCTGGCACTCCAGTGAGAATC
ACGCCTGCTCGCTTCACCGACGAGTACTGGGGAGCAGAGCGGTTCTTGAAGCACCGAAAGATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail