Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4871.t1
Gene name
Locationscaffold_10:604420..605666
Strand+
Gene length (bp)1246
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13912 zf-C2H2_6 C2H2-type zinc finger 2.2E-02 183 202

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4871.t1
MASRDSPGSPLSSVGSLETSDHESMKHESRAHSPSMSNMPPSKRRRTGGASWDRQTPLSSTHDENHPPPSPTASI
SSDSSGDIPNSPSILTLLGTNQEDDYSGQSTDQVTICRWDGCNAGDLGNMDGLVQHLHNEHIGSRQKRYSCEWTD
CTRKGQTHASAYALRAHMRSHTREKPFYCTLPECDRNFTRSDALTKHMRSVHETDTMRPIDSISKVHGTPGSTTG
TPASKLQRIRLKLTQPREPGSESEPHTEAITIVPTPTPIITDAHDPDETSMPEFGPELDFDESELALAPRDLYRL
LRRQIAWAGKEATQLQAEWEIIRPQREQAWREKEAIFDDLIDAEIGLFSAMVGSVPPVHLTTSLEKLQQQQQQFQ
NQQEQLAKSAEVPTIEGST*
Coding >Pro_DTO377G3_2|g4871.t1
ATGGCTTCACGAGACTCTCCCGGTTCCCCTCTCTCCTCGGTGGGATCCCTCGAGACTTCAGATCATGAATCCATG
AAACATGAAAGCCGCGCGCATTCTCCCTCGATGTCTAACATGCCGCCATCCAAGCGTCGTCGCACCGGTGGCGCA
TCCTGGGACCGTCAAACTCCTCTCTCCTCTACCCATGACGAAAACCACCCACCTCCCTCCCCGACTGCCTCGATC
TCCTCCGATAGCTCCGGCGATATTCCCAACTCCCCTAGCATCCTTACCCTCCTTGGTACCAATCAAGAAGATGAC
TACAGCGGCCAAAGCACCGACCAGGTTACTATTTGCCGATGGGATGGATGCAATGCTGGCGACCTTGGCAACATG
GATGGGTTGGTGCAGCATCTCCACAACGAGCACATCGGGAGCCGACAGAAACGGTACTCGTGCGAGTGGACGGAT
TGCACCCGCAAAGGTCAAACGCATGCTAGTGCTTATGCCCTCCGCGCACATATGCGAAGTCACACCCGCGAGAAG
CCATTCTACTGCACTCTGCCGGAATGCGACCGCAATTTCACTCGCTCTGACGCCCTGACCAAGCACATGCGGTCT
GTTCACGAGACTGACACTATGCGCCCGATCGACTCCATCTCAAAAGTCCACGGCACCCCGGGCAGCACTACTGGC
ACCCCTGCCTCGAAGTTGCAACGCATCCGCTTGAAGCTGACCCAGCCCAGGGAGCCGGGAAGTGAGTCTGAGCCA
CACACCGAAGCAATCACTATTGTGCCAACTCCCACCCCCATCATAACCGACGCACACGATCCCGACGAGACCTCG
ATGCCAGAGTTTGGCCCGGAGCTCGACTTCGACGAATCGGAGCTCGCCCTAGCTCCGCGCGACCTCTACCGTCTT
CTCCGTCGACAGATCGCGTGGGCTGGCAAGGAGGCCACACAGCTGCAAGCCGAGTGGGAAATAATTCGCCCGCAG
CGCGAGCAAGCATGGCGTGAGAAGGAGGCTATCTTTGACGACCTCATTGACGCCGAGATTGGCTTGTTCAGCGCA
ATGGTCGGCTCAGTACCCCCCGTGCACCTAACGACCAGCCTCGAAAAGTTGCAACAGCAGCAACAGCAGTTTCAG
AATCAACAGGAGCAGCTGGCCAAGTCGGCAGAGGTGCCGACTATCGAGGGCAGCACTTAG
Transcript >Pro_DTO377G3_2|g4871.t1
ATGGCTTCACGAGACTCTCCCGGTTCCCCTCTCTCCTCGGTGGGATCCCTCGAGACTTCAGATCATGAATCCATG
AAACATGAAAGCCGCGCGCATTCTCCCTCGATGTCTAACATGCCGCCATCCAAGCGTCGTCGCACCGGTGGCGCA
TCCTGGGACCGTCAAACTCCTCTCTCCTCTACCCATGACGAAAACCACCCACCTCCCTCCCCGACTGCCTCGATC
TCCTCCGATAGCTCCGGCGATATTCCCAACTCCCCTAGCATCCTTACCCTCCTTGGTACCAATCAAGAAGATGAC
TACAGCGGCCAAAGCACCGACCAGGTTACTATTTGCCGATGGGATGGATGCAATGCTGGCGACCTTGGCAACATG
GATGGGTTGGTGCAGCATCTCCACAACGAGCACATCGGGAGCCGACAGAAACGGTACTCGTGCGAGTGGACGGAT
TGCACCCGCAAAGGTCAAACGCATGCTAGTGCTTATGCCCTCCGCGCACATATGCGAAGTCACACCCGCGAGAAG
CCATTCTACTGCACTCTGCCGGAATGCGACCGCAATTTCACTCGCTCTGACGCCCTGACCAAGCACATGCGGTCT
GTTCACGAGACTGACACTATGCGCCCGATCGACTCCATCTCAAAAGTCCACGGCACCCCGGGCAGCACTACTGGC
ACCCCTGCCTCGAAGTTGCAACGCATCCGCTTGAAGCTGACCCAGCCCAGGGAGCCGGGAAGTGAGTCTGAGCCA
CACACCGAAGCAATCACTATTGTGCCAACTCCCACCCCCATCATAACCGACGCACACGATCCCGACGAGACCTCG
ATGCCAGAGTTTGGCCCGGAGCTCGACTTCGACGAATCGGAGCTCGCCCTAGCTCCGCGCGACCTCTACCGTCTT
CTCCGTCGACAGATCGCGTGGGCTGGCAAGGAGGCCACACAGCTGCAAGCCGAGTGGGAAATAATTCGCCCGCAG
CGCGAGCAAGCATGGCGTGAGAAGGAGGCTATCTTTGACGACCTCATTGACGCCGAGATTGGCTTGTTCAGCGCA
ATGGTCGGCTCAGTACCCCCCGTGCACCTAACGACCAGCCTCGAAAAGTTGCAACAGCAGCAACAGCAGTTTCAG
AATCAACAGGAGCAGCTGGCCAAGTCGGCAGAGGTGCCGACTATCGAGGGCAGCACTTAG
Gene >Pro_DTO377G3_2|g4871.t1
ATGGCTTCACGAGACTCTCCCGGTTCCCCTCTCTCCTCGGTGGGATCCCTCGAGACTTCAGATCATGAATCCATG
AAACATGAAAGCCGCGCGCATTCTCCCTCGATGTCTAACATGCCGCCATCCAAGCGTCGTCGCACCGGTGGCGCA
TCCTGGGACCGTCAAACTCCTCTCTCCTCTACCCATGACGAAAACCACCCACCTCCCTCCCCGACTGCCTCGATC
TCCTCCGATAGCTCCGGCGATATTCCCAACTCCCCTAGCATCCTTACCCTCCTTGGTACCAATCAAGAAGATGAC
TACAGCGGCCAAAGCACCGACCAGGTTACTATTTGCCGATGGGATGGATGCAATGCTGGCGACCTTGGCAACATG
GATGGGTTGGTGCAGCATCTCCACAACGAGCACATCGGGAGCCGACAGAAACGGTACTCGTGCGAGTGGACGGAT
TGCACCCGCAAAGGTCAAACGCATGCTAGTGCTTATGCCCTCCGCGCACATATGCGAAGTCACACCCGCGAGAAG
CCATTCTACTGCACTCTGCCGGGTAGGTTGTCTCAGACCCAGACTCGAGCAAACAGATCTCGAGTATTAACAATG
AAATACAGAATGCGACCGCAATTTCACTCGCTCTGACGCCCTGACCAAGCACATGCGGTCTGTTCACGAGACTGA
CACTATGCGCCCGATCGACTCCATCTCAAAAGTCCACGGCACCCCGGGCAGCACTACTGGCACCCCTGCCTCGAA
GTTGCAACGCATCCGCTTGAAGCTGACCCAGCCCAGGGAGCCGGGAAGTGAGTCTGAGCCACACACCGAAGCAAT
CACTATTGTGCCAACTCCCACCCCCATCATAACCGACGCACACGATCCCGACGAGACCTCGATGCCAGAGTTTGG
CCCGGAGCTCGACTTCGACGAATCGGAGCTCGCCCTAGCTCCGCGCGACCTCTACCGTCTTCTCCGTCGACAGAT
CGCGTGGGCTGGCAAGGAGGCCACACAGCTGCAAGCCGAGTGGGAAATAATTCGCCCGCAGCGCGAGCAAGCATG
GCGTGAGAAGGAGGCTATCTTTGACGACCTCATTGACGCCGAGATTGGCTTGTTCAGCGCAATGGTCGGCTCAGT
ACCCCCCGTGCACCTAACGACCAGCCTCGAAAAGTTGCAACAGCAGCAACAGCAGTTTCAGAATCAACAGGAGCA
GCTGGCCAAGTCGGCAGAGGTGCCGACTATCGAGGGCAGCACTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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