Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4863.t1
Gene name
Locationscaffold_10:575965..577065
Strand-
Gene length (bp)1100
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 9.1E-06 226 246

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4863.t1
MLSTCYTTQRTNIFREPLYNFPASVTAYRGIGIEEMSTCRTSIVSILNNDDNPSFAVRSAPRLSRTHISSSQYPH
SERPPSPISDPQYTRPAASSQSPATSPRGSRHHSDAVTDVAQPASPGSSDGSAYDYLTSQPSSYHPYARQDPRRE
PYRFPARGPAAPRTSPETRSTTSETASQTGATRGTGRKNKYPCPYAASHGCSSTFTTSGHAARHGKKHTGEKSVH
CPICNKAFTRKDNMKQHIRTHRSHSDEMRSISESEPDARWAMARPDAVYASVSHQRNVSQPIEAGARPVPGSVPV
PGPQAP*
Coding >Pro_DTO377G3_2|g4863.t1
ATGTTGTCGACGTGTTACACGACACAGAGGACAAACATATTTCGAGAGCCGCTGTATAATTTCCCAGCCTCGGTG
ACCGCATATCGGGGCATTGGCATTGAGGAGATGTCCACTTGTAGGACGAGTATTGTGTCCATTCTGAATAATGAT
GATAACCCATCTTTTGCGGTCCGTTCCGCGCCCCGACTTAGTCGGACTCACATATCATCATCACAATATCCACAT
TCAGAGCGACCACCCTCTCCTATCAGCGACCCACAGTATACCCGCCCTGCAGCTTCATCCCAATCTCCAGCAACA
TCACCACGAGGGAGCAGGCATCATTCAGACGCGGTGACGGACGTCGCCCAGCCCGCTTCGCCCGGGTCGTCCGAT
GGCTCAGCTTACGACTATCTCACCAGTCAACCATCATCTTACCACCCGTATGCCCGGCAGGATCCGCGACGGGAA
CCATACCGATTCCCAGCTCGCGGGCCAGCAGCTCCCCGAACATCACCCGAGACTCGTTCAACCACATCCGAAACG
GCTTCTCAGACCGGAGCGACGCGCGGCACGGGGCGAAAGAACAAGTACCCGTGCCCCTATGCCGCGAGCCATGGG
TGCTCTTCCACATTTACGACTTCGGGCCATGCTGCGCGCCACGGCAAAAAGCACACCGGCGAAAAGAGCGTGCAC
TGTCCGATCTGCAACAAAGCCTTTACGAGGAAAGACAACATGAAACAGCACATCCGGACCCATCGCTCGCACTCG
GACGAGATGCGCTCTATTTCCGAGTCGGAGCCTGATGCTCGGTGGGCGATGGCTCGTCCTGACGCGGTATACGCC
TCCGTCTCGCACCAGCGCAATGTCAGTCAACCTATCGAGGCAGGTGCACGGCCGGTCCCAGGGTCTGTCCCAGTG
CCTGGTCCCCAGGCGCCCTAA
Transcript >Pro_DTO377G3_2|g4863.t1
ATGTTGTCGACGTGTTACACGACACAGAGGACAAACATATTTCGAGAGCCGCTGTATAATTTCCCAGCCTCGGTG
ACCGCATATCGGGGCATTGGCATTGAGGAGATGTCCACTTGTAGGACGAGTATTGTGTCCATTCTGAATAATGAT
GATAACCCATCTTTTGCGGTCCGTTCCGCGCCCCGACTTAGTCGGACTCACATATCATCATCACAATATCCACAT
TCAGAGCGACCACCCTCTCCTATCAGCGACCCACAGTATACCCGCCCTGCAGCTTCATCCCAATCTCCAGCAACA
TCACCACGAGGGAGCAGGCATCATTCAGACGCGGTGACGGACGTCGCCCAGCCCGCTTCGCCCGGGTCGTCCGAT
GGCTCAGCTTACGACTATCTCACCAGTCAACCATCATCTTACCACCCGTATGCCCGGCAGGATCCGCGACGGGAA
CCATACCGATTCCCAGCTCGCGGGCCAGCAGCTCCCCGAACATCACCCGAGACTCGTTCAACCACATCCGAAACG
GCTTCTCAGACCGGAGCGACGCGCGGCACGGGGCGAAAGAACAAGTACCCGTGCCCCTATGCCGCGAGCCATGGG
TGCTCTTCCACATTTACGACTTCGGGCCATGCTGCGCGCCACGGCAAAAAGCACACCGGCGAAAAGAGCGTGCAC
TGTCCGATCTGCAACAAAGCCTTTACGAGGAAAGACAACATGAAACAGCACATCCGGACCCATCGCTCGCACTCG
GACGAGATGCGCTCTATTTCCGAGTCGGAGCCTGATGCTCGGTGGGCGATGGCTCGTCCTGACGCGGTATACGCC
TCCGTCTCGCACCAGCGCAATGTCAGTCAACCTATCGAGGCAGGTGCACGGCCGGTCCCAGGGTCTGTCCCAGTG
CCTGGTCCCCAGGCGCCCTAA
Gene >Pro_DTO377G3_2|g4863.t1
ATGTTGTCGACGTGTTACACGACACAGAGGACAAACATATTTCGAGAGCCGCTGGTGCGTTTGTCGGGTCCTCCG
GGGGGGCAAGAAATGAGAGAGATATTCTTTCTCTTCTTCTACACCCTCTTCCCTTTCTCCCCTTGTCTCAGACCG
GCGATCTCTCGAGTTCTTGCGAGTTCCCAGAGCCCGGCTGAGCCGGTTGCCAACAGTCTAAACTAACTTCATTTT
GTCTCTAGTATAATTTCCCAGCCTCGGTGACCGCATATCGGGGCATTGGCATTGAGGAGATGTCCACTTGTAGGA
CGAGTATTGTGTCCATTCTGAATAATGATGATAACCCATCTTTTGCGGTCCGTTCCGCGCCCCGACTTAGTCGGA
CTCACATATCATCATCACAATATCCACATTCAGAGCGACCACCCTCTCCTATCAGCGACCCACAGTATACCCGCC
CTGCAGCTTCATCCCAATCTCCAGCAACATCACCACGAGGGAGCAGGCATCATTCAGACGCGGTGACGGACGTCG
CCCAGCCCGCTTCGCCCGGGTCGTCCGATGGCTCAGCTTACGACTATCTCACCAGTCAACCATCATCTTACCACC
CGTATGCCCGGCAGGATCCGCGACGGGAACCATACCGATTCCCAGCTCGCGGGCCAGCAGCTCCCCGAACATCAC
CCGAGACTCGTTCAACCACATCCGAAACGGCTTCTCAGACCGGAGCGACGCGCGGCACGGGGCGAAAGAACAAGT
ACCCGTGCCCCTATGCCGCGAGCCATGGGTGCTCTTCCACATTTACGACTTCGGGCCATGCTGCGCGCCACGGCA
AAAAGCACACCGGCGAAAAGAGCGTGCACTGTCCGATCTGCAACAAAGCCTTTACGAGGAAAGACAACATGAAAC
AGCACATCCGGACCCATCGCTCGCACTCGGACGAGATGCGCTCTATTTCCGAGTCGGAGCCTGATGCTCGGTGGG
CGATGGCTCGTCCTGACGCGGTATACGCCTCCGTCTCGCACCAGCGCAATGTCAGTCAACCTATCGAGGCAGGTG
CACGGCCGGTCCCAGGGTCTGTCCCAGTGCCTGGTCCCCAGGCGCCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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