Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4857.t1
Gene name
Locationscaffold_10:561929..562870
Strand-
Gene length (bp)941
Transcript length (bp)885
Coding sequence length (bp)885
Protein length (aa) 295

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 8.8E-39 11 208
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.9E-33 16 234
PF08659 KR KR domain 1.4E-13 11 191

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4857.t1
MARVLEGKFGIVTGGSRGIGEAIARNLAAKGCSLLLIFTSESSRAHTEELCSFLAKTYNIKCESLQADLSQPTEA
VKAIIATAQQHFSTDGKLQIDILINNAGVSQDRTLNDANRGPIEAEHFNWHYAINVLAPLLLTQACAPFLPTDRS
GRIVSISSVSSSLGFIGQSIYGGTKAAVEAMTRTWARELSERATVNAVNPGPVVGDMYFKAGEQFWKDIQGYQDN
TPMSKLTDHGDTVSRLTDEQKQLIQEKMGGRRPAFTDEVAGVVGMLCTPDALWCTGSVVCANGGMKMGQ*
Coding >Pro_DTO377G3_2|g4857.t1
ATGGCTCGAGTACTTGAAGGGAAATTCGGCATCGTCACTGGAGGATCGCGGGGAATTGGCGAAGCAATTGCCCGT
AACCTGGCTGCAAAGGGCTGCTCATTACTTCTGATCTTTACTTCGGAGTCCTCGCGCGCCCACACCGAAGAACTG
TGCTCCTTTTTAGCCAAAACCTATAACATCAAATGCGAGAGCTTGCAAGCCGACCTAAGCCAGCCTACCGAAGCC
GTGAAAGCAATCATCGCTACCGCGCAGCAGCATTTCAGCACCGATGGAAAACTCCAGATCGACATCCTGATCAAT
AATGCTGGCGTATCGCAAGACCGGACCCTGAACGACGCCAATAGGGGCCCCATCGAGGCCGAGCACTTCAACTGG
CATTACGCGATCAATGTCCTCGCCCCGCTCCTCCTCACACAGGCATGCGCCCCATTCCTCCCAACCGACCGAAGC
GGCCGCATCGTGAGCATCTCCAGTGTATCCTCGTCGCTGGGTTTCATAGGCCAGTCGATCTATGGCGGTACCAAA
GCAGCCGTTGAGGCGATGACTCGCACCTGGGCACGTGAACTGTCCGAACGTGCGACCGTCAATGCGGTTAACCCC
GGCCCGGTCGTCGGTGATATGTACTTCAAGGCCGGAGAGCAGTTCTGGAAGGATATCCAAGGATACCAGGATAAC
ACGCCTATGAGCAAGCTGACGGATCACGGGGACACTGTGAGTCGCTTGACTGATGAGCAGAAGCAGTTAATTCAG
GAGAAGATGGGTGGTCGTCGACCGGCTTTCACTGATGAGGTTGCGGGTGTTGTTGGCATGTTGTGTACGCCTGAT
GCTCTCTGGTGTACTGGCAGTGTGGTATGTGCCAACGGTGGCATGAAGATGGGACAATAG
Transcript >Pro_DTO377G3_2|g4857.t1
ATGGCTCGAGTACTTGAAGGGAAATTCGGCATCGTCACTGGAGGATCGCGGGGAATTGGCGAAGCAATTGCCCGT
AACCTGGCTGCAAAGGGCTGCTCATTACTTCTGATCTTTACTTCGGAGTCCTCGCGCGCCCACACCGAAGAACTG
TGCTCCTTTTTAGCCAAAACCTATAACATCAAATGCGAGAGCTTGCAAGCCGACCTAAGCCAGCCTACCGAAGCC
GTGAAAGCAATCATCGCTACCGCGCAGCAGCATTTCAGCACCGATGGAAAACTCCAGATCGACATCCTGATCAAT
AATGCTGGCGTATCGCAAGACCGGACCCTGAACGACGCCAATAGGGGCCCCATCGAGGCCGAGCACTTCAACTGG
CATTACGCGATCAATGTCCTCGCCCCGCTCCTCCTCACACAGGCATGCGCCCCATTCCTCCCAACCGACCGAAGC
GGCCGCATCGTGAGCATCTCCAGTGTATCCTCGTCGCTGGGTTTCATAGGCCAGTCGATCTATGGCGGTACCAAA
GCAGCCGTTGAGGCGATGACTCGCACCTGGGCACGTGAACTGTCCGAACGTGCGACCGTCAATGCGGTTAACCCC
GGCCCGGTCGTCGGTGATATGTACTTCAAGGCCGGAGAGCAGTTCTGGAAGGATATCCAAGGATACCAGGATAAC
ACGCCTATGAGCAAGCTGACGGATCACGGGGACACTGTGAGTCGCTTGACTGATGAGCAGAAGCAGTTAATTCAG
GAGAAGATGGGTGGTCGTCGACCGGCTTTCACTGATGAGGTTGCGGGTGTTGTTGGCATGTTGTGTACGCCTGAT
GCTCTCTGGTGTACTGGCAGTGTGGTATGTGCCAACGGTGGCATGAAGATGGGACAATAG
Gene >Pro_DTO377G3_2|g4857.t1
ATGGCTCGAGTACTTGAAGGGAAATTCGGCATCGTCACTGGAGGATCGCGGGGTAAAGCCTAGCTCCCCCGCATA
CCAAGAGACCAAGCTAACACGCCACCTTCGCAGGAATTGGCGAAGCAATTGCCCGTAACCTGGCTGCAAAGGGCT
GCTCATTACTTCTGATCTTTACTTCGGAGTCCTCGCGCGCCCACACCGAAGAACTGTGCTCCTTTTTAGCCAAAA
CCTATAACATCAAATGCGAGAGCTTGCAAGCCGACCTAAGCCAGCCTACCGAAGCCGTGAAAGCAATCATCGCTA
CCGCGCAGCAGCATTTCAGCACCGATGGAAAACTCCAGATCGACATCCTGATCAATAATGCTGGCGTATCGCAAG
ACCGGACCCTGAACGACGCCAATAGGGGCCCCATCGAGGCCGAGCACTTCAACTGGCATTACGCGATCAATGTCC
TCGCCCCGCTCCTCCTCACACAGGCATGCGCCCCATTCCTCCCAACCGACCGAAGCGGCCGCATCGTGAGCATCT
CCAGTGTATCCTCGTCGCTGGGTTTCATAGGCCAGTCGATCTATGGCGGTACCAAAGCAGCCGTTGAGGCGATGA
CTCGCACCTGGGCACGTGAACTGTCCGAACGTGCGACCGTCAATGCGGTTAACCCCGGCCCGGTCGTCGGTGATA
TGTACTTCAAGGCCGGAGAGCAGTTCTGGAAGGATATCCAAGGATACCAGGATAACACGCCTATGAGCAAGCTGA
CGGATCACGGGGACACTGTGAGTCGCTTGACTGATGAGCAGAAGCAGTTAATTCAGGAGAAGATGGGTGGTCGTC
GACCGGCTTTCACTGATGAGGTTGCGGGTGTTGTTGGCATGTTGTGTACGCCTGATGCTCTCTGGTGTACTGGCA
GTGTGGTATGTGCCAACGGTGGCATGAAGATGGGACAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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