Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4849.t1
Gene name
Locationscaffold_10:550673..551111
Strand-
Gene length (bp)438
Transcript length (bp)438
Coding sequence length (bp)438
Protein length (aa) 146

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.8E-25 7 122
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.2E-19 15 122
PF08659 KR KR domain 3.1E-08 9 122

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4849.t1
MAALTGKVAIITGGSNGIGKATALRLARDGAKVVIQYRSNEQSAQEVVSQIGEQNALAIKGNASCVLNSEELIRR
TVEKFGQIDIVIANAGSLPLHDLANTSEQDFNDSIDLNVKGPYFLVQVRHADCRQPTCRRYKKKFFAADG*
Coding >Pro_DTO377G3_2|g4849.t1
ATGGCTGCTCTCACTGGAAAGGTTGCCATAATCACCGGTGGCTCTAATGGTATTGGCAAGGCGACAGCTCTTCGT
CTTGCGCGCGATGGTGCCAAGGTGGTTATCCAGTATCGCTCCAATGAGCAAAGCGCCCAGGAGGTGGTGAGCCAA
ATTGGAGAGCAGAACGCCCTGGCTATCAAGGGAAATGCCAGTTGTGTGCTCAACAGCGAGGAGCTGATCCGTCGT
ACAGTGGAGAAGTTTGGTCAAATTGACATTGTCATTGCCAACGCCGGTTCCTTGCCCCTCCATGACCTGGCAAAC
ACCTCGGAGCAAGACTTCAACGACAGTATTGATCTGAATGTGAAGGGACCCTACTTTTTGGTTCAGGTACGACAT
GCAGATTGCAGACAACCCACCTGCAGAAGATACAAAAAAAAGTTCTTTGCTGCTGATGGTTGA
Transcript >Pro_DTO377G3_2|g4849.t1
ATGGCTGCTCTCACTGGAAAGGTTGCCATAATCACCGGTGGCTCTAATGGTATTGGCAAGGCGACAGCTCTTCGT
CTTGCGCGCGATGGTGCCAAGGTGGTTATCCAGTATCGCTCCAATGAGCAAAGCGCCCAGGAGGTGGTGAGCCAA
ATTGGAGAGCAGAACGCCCTGGCTATCAAGGGAAATGCCAGTTGTGTGCTCAACAGCGAGGAGCTGATCCGTCGT
ACAGTGGAGAAGTTTGGTCAAATTGACATTGTCATTGCCAACGCCGGTTCCTTGCCCCTCCATGACCTGGCAAAC
ACCTCGGAGCAAGACTTCAACGACAGTATTGATCTGAATGTGAAGGGACCCTACTTTTTGGTTCAGGTACGACAT
GCAGATTGCAGACAACCCACCTGCAGAAGATACAAAAAAAAGTTCTTTGCTGCTGATGGTTGA
Gene >Pro_DTO377G3_2|g4849.t1
ATGGCTGCTCTCACTGGAAAGGTTGCCATAATCACCGGTGGCTCTAATGGTATTGGCAAGGCGACAGCTCTTCGT
CTTGCGCGCGATGGTGCCAAGGTGGTTATCCAGTATCGCTCCAATGAGCAAAGCGCCCAGGAGGTGGTGAGCCAA
ATTGGAGAGCAGAACGCCCTGGCTATCAAGGGAAATGCCAGTTGTGTGCTCAACAGCGAGGAGCTGATCCGTCGT
ACAGTGGAGAAGTTTGGTCAAATTGACATTGTCATTGCCAACGCCGGTTCCTTGCCCCTCCATGACCTGGCAAAC
ACCTCGGAGCAAGACTTCAACGACAGTATTGATCTGAATGTGAAGGGACCCTACTTTTTGGTTCAGGTACGACAT
GCAGATTGCAGACAACCCACCTGCAGAAGATACAAAAAAAAGTTCTTTGCTGCTGATGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail