Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4845.t1
Gene name
Locationscaffold_10:544620..546695
Strand+
Gene length (bp)2075
Transcript length (bp)1791
Coding sequence length (bp)1791
Protein length (aa) 597

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 2.5E-04 462 484
PF00096 zf-C2H2 Zinc finger, C2H2 type 6.3E-07 490 512
PF00096 zf-C2H2 Zinc finger, C2H2 type 3.9E-05 547 572
PF13894 zf-C2H2_4 C2H2-type zinc finger 2.6E-04 490 512
PF12874 zf-met Zinc-finger of C2H2 type 6.4E-03 462 485

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4845.t1
MASETQQGDFCLECNWEAFHIDGRPAADPSGNAFQHHWNCSSHETQIPLPPCEVDEACCDVDDCALDCGSVCGHF
TGCDTSTVCSVTHCADDNCDDDNCDDNHCGDTHCDTNHCEEDTCQDNHCENIDPLCFEDHCCEVTASQDCGFDAM
FGLNNQLSLDTGAFPSMAMGNHSVGHTTKAMQHPFPGLVDPFQQENFLSSYQTHATHCEQDVSNHFECHDFQKDW
QGMFVSPPAPTQAEVNPAEVFHMLGMCSDFSICQDQHVPGPQTSVDTFEKPKIDTSNAFNCFHPGHHHVHSHFKN
PNDFNLQVIRKGPHRNHHRCRAHTHAHAHAHAHSHPYSPYSRQSRSSISSHLISSPGETPPPLEGDSSSVLTTPD
FSPADSKLHICKWTTEIRGIKAACGATFADCGSLQEHLVACHMNTVNGAKGNGYYCCWEGCHRPDEPFSQKSKLQ
GHFLTHSNYKNFSCSVCGKAFARQATLDRHERSHRGDKPYKCKDCGKSFTDSSELKTHSRTHTGEKPFKCTWPGC
NFTTGDSSNMSSHRLTHGERKHKCLFPGCTKSFTRPDQLKRHQRTTHKQEACSTLPSPSPDPFTMTPFTLV*
Coding >Pro_DTO377G3_2|g4845.t1
ATGGCTTCCGAAACCCAACAAGGCGATTTCTGCCTTGAATGCAACTGGGAAGCGTTCCATATTGATGGCAGACCT
GCGGCAGATCCCTCGGGTAATGCGTTTCAACATCATTGGAACTGTTCAAGTCATGAAACCCAGATACCGCTACCC
CCTTGTGAGGTCGATGAGGCCTGCTGTGATGTAGACGACTGCGCGCTAGACTGCGGGTCCGTATGTGGCCACTTT
ACGGGCTGTGACACTTCCACTGTCTGCTCAGTCACTCATTGCGCGGATGACAACTGTGATGATGATAACTGCGAC
GATAACCATTGCGGCGATACTCATTGTGATACCAACCACTGCGAAGAGGATACCTGCCAGGACAACCATTGTGAA
AATATTGACCCCCTGTGCTTCGAAGACCACTGCTGTGAAGTTACCGCGAGTCAAGACTGCGGCTTTGATGCTATG
TTTGGACTCAACAACCAACTGTCGCTAGACACGGGCGCTTTCCCTTCGATGGCAATGGGAAATCATTCCGTTGGG
CATACGACAAAAGCCATGCAACATCCTTTCCCTGGTCTCGTCGATCCATTTCAACAGGAAAACTTCCTATCCTCA
TACCAAACGCATGCCACCCACTGCGAGCAGGATGTATCCAACCACTTCGAGTGCCATGATTTCCAGAAAGACTGG
CAGGGGATGTTCGTGTCGCCTCCTGCTCCCACACAGGCCGAAGTTAACCCAGCCGAGGTTTTCCACATGCTCGGT
ATGTGCTCTGACTTCTCGATATGCCAAGATCAACACGTACCTGGGCCTCAGACCAGTGTCGATACCTTTGAGAAA
CCCAAAATCGACACGTCAAATGCATTCAATTGCTTCCATCCCGGACATCATCATGTCCACAGCCATTTCAAAAAT
CCCAATGATTTCAACCTGCAGGTTATCCGCAAAGGACCTCACCGCAACCATCATCGCTGCCGAGCTCACACCCAT
GCTCATGCTCATGCTCACGCCCATTCTCACCCGTATTCCCCTTATTCTCGACAGTCTCGCTCAAGCATCAGCTCT
CACCTCATTTCCAGTCCGGGAGAAACCCCACCACCTCTCGAAGGCGACTCCTCATCCGTACTCACCACACCGGAC
TTTTCTCCAGCCGACAGTAAGCTGCATATCTGCAAGTGGACAACGGAGATTCGCGGAATCAAGGCTGCTTGTGGT
GCCACTTTTGCCGACTGTGGCTCTCTACAAGAGCATCTCGTTGCCTGTCATATGAATACCGTGAATGGTGCCAAG
GGCAATGGGTACTACTGCTGCTGGGAAGGATGTCATCGCCCGGATGAGCCATTTTCGCAGAAGTCCAAGCTTCAA
GGTCATTTCCTTACACACAGTAACTACAAGAATTTCTCATGCTCGGTGTGCGGCAAGGCATTTGCTAGACAAGCG
ACATTAGACCGACACGAGCGCAGTCATCGTGGCGACAAACCATACAAATGCAAAGACTGTGGTAAATCATTTACA
GACAGCAGCGAATTGAAAACACATTCCCGAACCCATACCGGCGAGAAGCCTTTCAAATGCACCTGGCCAGGATGC
AATTTCACCACGGGCGATTCTTCCAATATGTCTAGTCACAGGCTTACCCACGGAGAGCGAAAACATAAATGCCTT
TTCCCAGGGTGCACTAAGAGCTTTACACGTCCTGACCAATTGAAACGGCACCAGAGGACAACACATAAACAAGAA
GCCTGCTCGACACTCCCATCACCGAGCCCCGATCCCTTCACTATGACCCCCTTCACTCTCGTCTAA
Transcript >Pro_DTO377G3_2|g4845.t1
ATGGCTTCCGAAACCCAACAAGGCGATTTCTGCCTTGAATGCAACTGGGAAGCGTTCCATATTGATGGCAGACCT
GCGGCAGATCCCTCGGGTAATGCGTTTCAACATCATTGGAACTGTTCAAGTCATGAAACCCAGATACCGCTACCC
CCTTGTGAGGTCGATGAGGCCTGCTGTGATGTAGACGACTGCGCGCTAGACTGCGGGTCCGTATGTGGCCACTTT
ACGGGCTGTGACACTTCCACTGTCTGCTCAGTCACTCATTGCGCGGATGACAACTGTGATGATGATAACTGCGAC
GATAACCATTGCGGCGATACTCATTGTGATACCAACCACTGCGAAGAGGATACCTGCCAGGACAACCATTGTGAA
AATATTGACCCCCTGTGCTTCGAAGACCACTGCTGTGAAGTTACCGCGAGTCAAGACTGCGGCTTTGATGCTATG
TTTGGACTCAACAACCAACTGTCGCTAGACACGGGCGCTTTCCCTTCGATGGCAATGGGAAATCATTCCGTTGGG
CATACGACAAAAGCCATGCAACATCCTTTCCCTGGTCTCGTCGATCCATTTCAACAGGAAAACTTCCTATCCTCA
TACCAAACGCATGCCACCCACTGCGAGCAGGATGTATCCAACCACTTCGAGTGCCATGATTTCCAGAAAGACTGG
CAGGGGATGTTCGTGTCGCCTCCTGCTCCCACACAGGCCGAAGTTAACCCAGCCGAGGTTTTCCACATGCTCGGT
ATGTGCTCTGACTTCTCGATATGCCAAGATCAACACGTACCTGGGCCTCAGACCAGTGTCGATACCTTTGAGAAA
CCCAAAATCGACACGTCAAATGCATTCAATTGCTTCCATCCCGGACATCATCATGTCCACAGCCATTTCAAAAAT
CCCAATGATTTCAACCTGCAGGTTATCCGCAAAGGACCTCACCGCAACCATCATCGCTGCCGAGCTCACACCCAT
GCTCATGCTCATGCTCACGCCCATTCTCACCCGTATTCCCCTTATTCTCGACAGTCTCGCTCAAGCATCAGCTCT
CACCTCATTTCCAGTCCGGGAGAAACCCCACCACCTCTCGAAGGCGACTCCTCATCCGTACTCACCACACCGGAC
TTTTCTCCAGCCGACAGTAAGCTGCATATCTGCAAGTGGACAACGGAGATTCGCGGAATCAAGGCTGCTTGTGGT
GCCACTTTTGCCGACTGTGGCTCTCTACAAGAGCATCTCGTTGCCTGTCATATGAATACCGTGAATGGTGCCAAG
GGCAATGGGTACTACTGCTGCTGGGAAGGATGTCATCGCCCGGATGAGCCATTTTCGCAGAAGTCCAAGCTTCAA
GGTCATTTCCTTACACACAGTAACTACAAGAATTTCTCATGCTCGGTGTGCGGCAAGGCATTTGCTAGACAAGCG
ACATTAGACCGACACGAGCGCAGTCATCGTGGCGACAAACCATACAAATGCAAAGACTGTGGTAAATCATTTACA
GACAGCAGCGAATTGAAAACACATTCCCGAACCCATACCGGCGAGAAGCCTTTCAAATGCACCTGGCCAGGATGC
AATTTCACCACGGGCGATTCTTCCAATATGTCTAGTCACAGGCTTACCCACGGAGAGCGAAAACATAAATGCCTT
TTCCCAGGGTGCACTAAGAGCTTTACACGTCCTGACCAATTGAAACGGCACCAGAGGACAACACATAAACAAGAA
GCCTGCTCGACACTCCCATCACCGAGCCCCGATCCCTTCACTATGACCCCCTTCACTCTCGTCTAA
Gene >Pro_DTO377G3_2|g4845.t1
ATGGCTTCCGAAACCCAACAAGGCGATTTCTGCCTTGAATGCAACTGGGAAGCGTTCCATATTGATGGCAGACCT
GCGGCAGATCCCTCGGGTAATGCGTTTCAACATCATTGGAACTGTTCAAGTCATGAAACCCAGATACCGCTACCC
CCTTGTGAGGTCGATGAGGCCTGCTGTGATGTAGACGACTGCGCGCTAGACTGCGGGTCCGTATGTGGCCACTTT
ACGGGCTGTGACACTTCCACTGTCTGCTCAGTCACTCATTGCGCGGATGACAACTGTGATGATGATAACTGCGAC
GATAACCATTGCGGCGATACTCATTGTGATACCAACCACTGCGAAGAGGATACCTGCCAGGACAACCATTGTGAA
AATATTGACCCCCTGTGCTTCGAAGACCACTGCTGTGAAGTTACCGCGAGTCAAGACTGCGGCTTTGATGCTATG
TTTGGACTCAACAACCAACTGTCGCTAGACACGGGCGCTTTCCCTTCGATGGCAATGGGAAATCATTCCGTTGGG
CATACGACAAAAGCCATGCAACATCCTTTCCCTGGTCTCGTCGATCCATTTCAACAGGAAAACTTCCTATCCTCA
TACCAAACGCATGCCACCCACTGCGAGCAGGATGTATCCAACCACTTCGAGTGCCATGATTTCCAGAAAGACTGG
CAGGGGATGTTCGTGTCGCCTCCTGCTCCCACACAGGCCGAAGTTAACCCAGCCGAGGTTTTCCACATGCTCGGT
ATGTGCTCTGACTTCTCGATATGCCAAGATCAACACGTACCTGGGCCTCAGACCAGTGTCGATACCTTTGAGAAA
CCCAAAATCGACACGTCAAATGCATTCAATTGCTTCCATCCCGGACATCATCATGTCCACAGCCATTTCAAAAAT
CCCAATGATTTCAACCTGCAGGTTATCCGCAAAGGACCTCACCGCAACCATCATCGCTGCCGAGCTCACACCCAT
GCTCATGCTCATGCTCACGCCCATTCTCACCCGTATTCCCCTTATTCTCGACAGTCTCGCTCAAGCATCAGCTCT
CACCTCATTTCCAGTCCGGGAGAAACCCCACCACCTCTCGAAGGCGACTCCTCATCCGTACTCACCACACCGGAC
TTTTCTCCAGCCGACAGTAAGCTGCATATCTGCAAGTGGACAACGGAGATTCGCGGAATCAAGGCTGCTTGTGGT
GCCACTTTTGCCGACTGTGGCTCTCTACAAGAGCATCTCGTTGCCTGTCATATGAATACCGTGAATGGTGCCAAG
GGCAATGGGTACTACTGCTGCTGGGAAGGATGTCATCGCCCGGATGAGCCATTTTCGCAGAAGTCCAAGCTTCAA
GGTCATTTCCTTACACACAGTAACTGTACGCCATATCTTTCATCTCACGATCTACCGAGGGTAGGACAAATGTGC
TAACACGAATGGTATCCTTCTAGACAAGAATTTCTCATGCTCGGTGTGCGGCAAGGCATTTGCTAGACAAGCGAC
ATTAGACCGACACGAGCGCAGTCATCGTGGCGACAAACCATACAAATGCAAAGACTGTGGTAAATCATTTACAGA
CAGCAGCGAATTGAGTATGTCGTTGTCAAATTCCTTTTAGGATCCACCGCTGACCACCCCAGAAACACATTCCCG
AACCCATACCGGCGAGAAGCCTTTCAAATGCACCTGGCCAGGATGCAATTTCACCACGGGCGATGTAAGTTGTCC
ATCTCTATGCGATATACTGGCTCATGTTCTAACATCGAACCAGTCTTCCAATATGTCTAGTCACAGGCTTAGTAT
GATACCCCTGCCATCTCAAATGTTTAATTTACTGACTCTGTCTAGCCCACGGAGAGCGAAAACATAAATGCCTTT
TCCCAGGGTGCACTAAGAGCTTTACACGTCCTGGTAAGTTCTGACCTGAGCTCTGTTCTTATCGCCTACATGCTA
ACGTTAATTTCTCCGTAGACCAATTGAAACGGCACCAGAGGACAACACATAAACAAGAAGCCTGCTCGACACTCC
CATCACCGAGCCCCGATCCCTTCACTATGACCCCCTTCACTCTCGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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