Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4836.t1
Gene name
Locationscaffold_10:517152..518387
Strand+
Gene length (bp)1235
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 5.4E-13 10 91
PF00153 Mito_carr Mitochondrial carrier protein 3.3E-07 126 211
PF00153 Mito_carr Mitochondrial carrier protein 3.4E-18 243 351

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 62 84 22
3 240 262 22
4 324 343 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4836.t1
MYNTHSDIWVAGAFAALIVDFIAYPFDTLKTRVQSPDYEKVFKNARTGAVRRNVLFRGLYQGVWSVVFTTIPASG
AFFTTYEAVKSIMYNSSKEASTSMNGGKRSSPDGSLNSLRLPFTHSLPTPIMNAIASSAGEMVSCLIITPAEVLK
QNAQMVQGSHADKSAMRQVIWRFQHHPWRLWSGYTALLARNLPNTALQFPLFEYVRSHLINRRRRLKATRMNTGQ
PPSEIKDQLVERAGLTGIAAAISGTIAATVTTPIDVIKTRLMLSASDAASSQHKSTQAGTRGNEAISSDVRKKTK
PGKTLISVGRDIIRYEGVRGLFKGGLIRAGWTAIALGLYLSLYEGARFYLENRRKEREHVS*
Coding >Pro_DTO377G3_2|g4836.t1
ATGTACAACACTCATTCCGATATTTGGGTCGCAGGCGCATTTGCCGCACTCATAGTCGATTTTATCGCCTACCCC
TTCGACACACTCAAGACCCGTGTCCAATCCCCAGACTATGAGAAGGTCTTCAAGAATGCGCGCACAGGAGCAGTG
CGGCGCAATGTACTCTTCCGAGGATTATACCAAGGTGTTTGGAGTGTGGTCTTCACAACAATTCCAGCTTCTGGC
GCATTCTTTACCACATACGAAGCTGTGAAGAGCATTATGTACAATTCCTCAAAAGAAGCATCCACGAGCATGAAC
GGTGGCAAGAGAAGCTCACCCGATGGCTCTTTGAACAGTCTTCGCTTGCCCTTCACACATTCCCTCCCTACTCCA
ATTATGAATGCAATTGCCTCTTCGGCCGGCGAGATGGTATCATGCCTCATTATCACGCCCGCGGAGGTACTGAAA
CAAAACGCACAGATGGTTCAAGGCTCCCATGCGGACAAATCCGCCATGCGACAAGTAATCTGGCGATTCCAACAT
CATCCTTGGCGCCTATGGAGTGGGTATACGGCACTGCTTGCTCGGAACCTCCCAAACACAGCTTTACAATTTCCA
CTCTTTGAGTATGTACGATCACACCTGATTAACCGACGAAGACGATTGAAAGCGACTCGGATGAACACTGGTCAA
CCACCATCGGAAATCAAGGATCAACTAGTCGAACGGGCCGGCTTGACGGGTATAGCTGCGGCAATTTCAGGCACG
ATCGCGGCGACAGTTACTACTCCAATTGACGTTATCAAGACTCGACTGATGCTTTCGGCAAGTGATGCTGCTAGT
TCCCAACATAAAAGTACTCAGGCTGGTACTCGGGGCAATGAGGCGATATCTTCGGATGTGCGGAAAAAAACTAAA
CCTGGCAAGACTCTCATTTCTGTCGGTCGTGATATCATACGATATGAGGGTGTCCGTGGTTTGTTCAAGGGCGGA
CTGATACGGGCTGGTTGGACGGCGATTGCACTAGGCCTTTATCTCAGCCTGTATGAAGGAGCCCGGTTTTATCTA
GAGAATCGACGGAAGGAGCGCGAGCATGTCAGTTAG
Transcript >Pro_DTO377G3_2|g4836.t1
ATGTACAACACTCATTCCGATATTTGGGTCGCAGGCGCATTTGCCGCACTCATAGTCGATTTTATCGCCTACCCC
TTCGACACACTCAAGACCCGTGTCCAATCCCCAGACTATGAGAAGGTCTTCAAGAATGCGCGCACAGGAGCAGTG
CGGCGCAATGTACTCTTCCGAGGATTATACCAAGGTGTTTGGAGTGTGGTCTTCACAACAATTCCAGCTTCTGGC
GCATTCTTTACCACATACGAAGCTGTGAAGAGCATTATGTACAATTCCTCAAAAGAAGCATCCACGAGCATGAAC
GGTGGCAAGAGAAGCTCACCCGATGGCTCTTTGAACAGTCTTCGCTTGCCCTTCACACATTCCCTCCCTACTCCA
ATTATGAATGCAATTGCCTCTTCGGCCGGCGAGATGGTATCATGCCTCATTATCACGCCCGCGGAGGTACTGAAA
CAAAACGCACAGATGGTTCAAGGCTCCCATGCGGACAAATCCGCCATGCGACAAGTAATCTGGCGATTCCAACAT
CATCCTTGGCGCCTATGGAGTGGGTATACGGCACTGCTTGCTCGGAACCTCCCAAACACAGCTTTACAATTTCCA
CTCTTTGAGTATGTACGATCACACCTGATTAACCGACGAAGACGATTGAAAGCGACTCGGATGAACACTGGTCAA
CCACCATCGGAAATCAAGGATCAACTAGTCGAACGGGCCGGCTTGACGGGTATAGCTGCGGCAATTTCAGGCACG
ATCGCGGCGACAGTTACTACTCCAATTGACGTTATCAAGACTCGACTGATGCTTTCGGCAAGTGATGCTGCTAGT
TCCCAACATAAAAGTACTCAGGCTGGTACTCGGGGCAATGAGGCGATATCTTCGGATGTGCGGAAAAAAACTAAA
CCTGGCAAGACTCTCATTTCTGTCGGTCGTGATATCATACGATATGAGGGTGTCCGTGGTTTGTTCAAGGGCGGA
CTGATACGGGCTGGTTGGACGGCGATTGCACTAGGCCTTTATCTCAGCCTGTATGAAGGAGCCCGGTTTTATCTA
GAGAATCGACGGAAGGAGCGCGAGCATGTCAGTTAG
Gene >Pro_DTO377G3_2|g4836.t1
ATGTACAACACTCATTCCGATATTTGGGTCGTGAGTCTCACCCGATCAAAGCATCTCCAGTATACTTTCCTATTC
TCACCACTAACTGGTCATATTCCTCAATAGGCAGGCGCATTTGCCGCACTCATAGTCGATTTTATCGCCTACCCC
TTCGACACACTCAAGACCCGTGTCCAATCCCCAGACTATGAGAAGGTCTTCAAGAATGCGCGCACAGGAGCAGTG
CGGCGCAATGTACTCTTCCGAGGATTATACCAAGGTGTTTGGAGTGTGGTCTTCACAACAATTCCAGCTTGTATG
TGTTGGCTCTTGTTGATGAACAGGGAACTAGGAATATCACCACTAACGATCCTATCAACGACAATCTAGCTGGCG
CATTCTTTACCACATACGAAGCTGTGAAGAGCATTATGTACAATTCCTCAAAAGAAGCATCCACGAGCATGAACG
GTGGCAAGAGAAGCTCACCCGATGGCTCTTTGAACAGTCTTCGCTTGCCCTTCACACATTCCCTCCCTACTCCAA
TTATGAATGCAATTGCCTCTTCGGCCGGCGAGATGGTATCATGCCTCATTATCACGCCCGCGGAGGTACTGAAAC
AAAACGCACAGATGGTTCAAGGCTCCCATGCGGACAAATCCGCCATGCGACAAGTAATCTGGCGATTCCAACATC
ATCCTTGGCGCCTATGGAGTGGGTATACGGCACTGCTTGCTCGGAACCTCCCAAACACAGCTTTACAATTTCCAC
TCTTTGAGTATGTACGATCACACCTGATTAACCGACGAAGACGATTGAAAGCGACTCGGATGAACACTGGTCAAC
CACCATCGGAAATCAAGGATCAACTAGTCGAACGGGCCGGCTTGACGGGTATAGCTGCGGCAATTTCAGGCACGA
TCGCGGCGACAGTTACTACTCCAATTGACGTTATCAAGACTCGACTGATGCTTTCGGCAAGTGATGCTGCTAGTT
CCCAACATAAAAGTACTCAGGCTGGTACTCGGGGCAATGAGGCGATATCTTCGGATGTGCGGAAAAAAACTAAAC
CTGGCAAGACTCTCATTTCTGTCGGTCGTGATATCATACGATATGAGGGTGTCCGTGGTTTGTTCAAGGGCGGAC
TGATACGGGCTGGTTGGACGGCGATTGCACTAGGCCTTTATCTCAGCCTGTATGAAGGAGCCCGGTTTTATCTAG
AGAATCGACGGAAGGAGCGCGAGCATGTCAGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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