Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4810.t1
Gene name
Locationscaffold_10:459618..461184
Strand-
Gene length (bp)1566
Transcript length (bp)1455
Coding sequence length (bp)1455
Protein length (aa) 485

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02803 Thiolase_C Thiolase, C-terminal domain 6.3E-10 287 388
PF00108 Thiolase_N Thiolase, N-terminal domain 1.6E-09 6 121

GO

GO Term Description Terminal node
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups Yes
GO:0016746 acyltransferase activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 1.66 0.21 3.10
5d_25C Five days - 25 degrees Celsius 1.76 0.26 3.27
7d_25C Seven days - 25 degrees Celsius 2.69 0.64 4.73
10d_25C Ten days - 25 degrees Celsius 1.42 0.15 2.69
7d_15C Seven days - 15 degrees Celsius 4.07 1.24 6.90
7d_30C Seven days - 30 degrees Celsius 1.81 0.30 3.32

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.934061 no
3d_25C 7d_25C 0.353469 no
3d_25C 7d_15C 0.043601 yes
3d_25C 7d_30C 0.902542 no
3d_25C 10d_25C 0.823502 no
5d_25C 7d_25C 0.435401 no
5d_25C 7d_15C 0.060739 no
5d_25C 7d_30C 0.974072 no
5d_25C 10d_25C 0.739466 no
7d_25C 7d_15C 0.356796 no
7d_25C 7d_30C 0.462412 no
7d_25C 10d_25C 0.187531 no
7d_15C 7d_30C 0.066653 no
7d_15C 10d_25C 0.014377 yes
7d_30C 10d_25C 0.704059 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4810.t1
MTASPVYIVGVGMTPFQSPKKSAATSSNPEGDYFNLAVSACVKALLDAGINYDDVDQGVGCYVFGDSAGAQRVFY
TLGMTGVPIYNVHNYCSAGSTGLYMANQFIQAGSADCVLVVGFDKMYPGALPQIYKDRENPLGRILALSKRFIPE
GQAESAGWTPQLYANAQAEYLEKYGSNGAKAEHFAAIASTNRTHGMNNPYSQLRQSVTTKEVSSSPQVSGSITRL
QCCPSSTGAAATVLVSERFLQAHPYLKGSAIAIRGQALATDSRDLYEPASAIELIGSNMTRRAAQNAFKQASLSP
KDIQVIELHDCFTTNEMCAIEDLGLAPHGEGWKLVAGGGITYDQSSKTKRTSPGWIINPSGGLISKGHPLGATGL
AQTAELVWHLRGWASNRCVPQTKYCLQHNMGLGGATVVTVLGRADDKVAPLSSEIQDQVDGRRRLGYNPALEARG
VNKQDIEAVKSRKAFSNWAADTFEALGNPREVRL*
Coding >Pro_DTO377G3_2|g4810.t1
ATGACTGCCTCCCCAGTATACATCGTCGGTGTGGGGATGACCCCATTTCAGTCTCCCAAAAAATCAGCTGCAACC
TCCTCCAATCCCGAGGGAGATTATTTCAACCTCGCCGTATCCGCATGTGTGAAAGCTTTACTCGATGCCGGAATC
AACTATGATGATGTTGATCAGGGAGTTGGGTGTTATGTGTTTGGTGACTCTGCTGGCGCACAGCGTGTTTTCTAC
ACCCTGGGGATGACTGGAGTTCCCATTTACAATGTTCATAACTACTGCAGCGCAGGGAGTACGGGCCTGTATATG
GCCAATCAGTTTATTCAGGCCGGCAGTGCTGATTGTGTCCTTGTGGTGGGATTTGACAAAATGTATCCTGGTGCT
CTTCCACAGATTTATAAGGATAGGGAGAATCCCCTGGGAAGAATTCTGGCTCTTTCGAAGCGTTTTATTCCCGAA
GGTCAAGCAGAATCAGCTGGCTGGACACCTCAGCTATATGCCAACGCCCAAGCTGAGTACCTGGAAAAATACGGG
TCGAACGGAGCAAAAGCAGAGCATTTCGCCGCTATTGCCTCCACTAACCGTACGCATGGCATGAACAATCCATAC
AGTCAGCTGCGTCAGTCTGTGACGACCAAGGAAGTTTCATCGAGTCCACAGGTGTCGGGATCGATTACTCGGCTA
CAATGCTGTCCATCCTCGACCGGAGCTGCCGCCACGGTCCTAGTGTCGGAGCGTTTCCTGCAAGCTCATCCCTAC
CTGAAGGGAAGCGCAATTGCCATTAGGGGCCAAGCCCTTGCAACTGACTCTCGGGATTTGTATGAGCCCGCGAGC
GCCATCGAGCTGATTGGGTCCAATATGACAAGACGTGCTGCCCAGAATGCCTTCAAGCAGGCTTCACTATCACCC
AAAGATATCCAAGTGATTGAGCTGCATGATTGCTTTACGACAAACGAGATGTGTGCGATCGAAGACTTGGGCCTA
GCTCCACACGGCGAAGGGTGGAAGCTGGTCGCCGGTGGAGGCATCACGTATGATCAAAGTTCTAAAACGAAAAGA
ACGTCTCCAGGATGGATCATCAATCCCAGTGGCGGATTGATTTCCAAGGGTCATCCGCTGGGAGCGACAGGCCTT
GCTCAAACGGCCGAGTTAGTATGGCATCTACGTGGCTGGGCATCAAACCGTTGTGTACCGCAGACCAAATACTGC
CTGCAGCACAACATGGGCCTCGGGGGTGCTACAGTTGTCACTGTTTTAGGTCGTGCCGATGACAAAGTTGCACCC
TTGTCGTCTGAAATCCAGGATCAGGTTGACGGACGACGACGTCTCGGATATAACCCAGCTCTGGAGGCAAGGGGA
GTAAACAAGCAGGATATCGAGGCCGTGAAATCTCGAAAGGCATTTAGTAATTGGGCTGCCGACACATTCGAAGCT
CTGGGAAATCCACGTGAAGTTAGATTGTGA
Transcript >Pro_DTO377G3_2|g4810.t1
ATGACTGCCTCCCCAGTATACATCGTCGGTGTGGGGATGACCCCATTTCAGTCTCCCAAAAAATCAGCTGCAACC
TCCTCCAATCCCGAGGGAGATTATTTCAACCTCGCCGTATCCGCATGTGTGAAAGCTTTACTCGATGCCGGAATC
AACTATGATGATGTTGATCAGGGAGTTGGGTGTTATGTGTTTGGTGACTCTGCTGGCGCACAGCGTGTTTTCTAC
ACCCTGGGGATGACTGGAGTTCCCATTTACAATGTTCATAACTACTGCAGCGCAGGGAGTACGGGCCTGTATATG
GCCAATCAGTTTATTCAGGCCGGCAGTGCTGATTGTGTCCTTGTGGTGGGATTTGACAAAATGTATCCTGGTGCT
CTTCCACAGATTTATAAGGATAGGGAGAATCCCCTGGGAAGAATTCTGGCTCTTTCGAAGCGTTTTATTCCCGAA
GGTCAAGCAGAATCAGCTGGCTGGACACCTCAGCTATATGCCAACGCCCAAGCTGAGTACCTGGAAAAATACGGG
TCGAACGGAGCAAAAGCAGAGCATTTCGCCGCTATTGCCTCCACTAACCGTACGCATGGCATGAACAATCCATAC
AGTCAGCTGCGTCAGTCTGTGACGACCAAGGAAGTTTCATCGAGTCCACAGGTGTCGGGATCGATTACTCGGCTA
CAATGCTGTCCATCCTCGACCGGAGCTGCCGCCACGGTCCTAGTGTCGGAGCGTTTCCTGCAAGCTCATCCCTAC
CTGAAGGGAAGCGCAATTGCCATTAGGGGCCAAGCCCTTGCAACTGACTCTCGGGATTTGTATGAGCCCGCGAGC
GCCATCGAGCTGATTGGGTCCAATATGACAAGACGTGCTGCCCAGAATGCCTTCAAGCAGGCTTCACTATCACCC
AAAGATATCCAAGTGATTGAGCTGCATGATTGCTTTACGACAAACGAGATGTGTGCGATCGAAGACTTGGGCCTA
GCTCCACACGGCGAAGGGTGGAAGCTGGTCGCCGGTGGAGGCATCACGTATGATCAAAGTTCTAAAACGAAAAGA
ACGTCTCCAGGATGGATCATCAATCCCAGTGGCGGATTGATTTCCAAGGGTCATCCGCTGGGAGCGACAGGCCTT
GCTCAAACGGCCGAGTTAGTATGGCATCTACGTGGCTGGGCATCAAACCGTTGTGTACCGCAGACCAAATACTGC
CTGCAGCACAACATGGGCCTCGGGGGTGCTACAGTTGTCACTGTTTTAGGTCGTGCCGATGACAAAGTTGCACCC
TTGTCGTCTGAAATCCAGGATCAGGTTGACGGACGACGACGTCTCGGATATAACCCAGCTCTGGAGGCAAGGGGA
GTAAACAAGCAGGATATCGAGGCCGTGAAATCTCGAAAGGCATTTAGTAATTGGGCTGCCGACACATTCGAAGCT
CTGGGAAATCCACGTGAAGTTAGATTGTGA
Gene >Pro_DTO377G3_2|g4810.t1
ATGACTGCCTCCCCAGTATACATCGTCGGTGTGGGGATGACCCCATTTCAGTCTCCCAAAAAATCAGCTGCAACC
TCCTCCAATCCCGAGGGAGATTATTTCAACCTCGCCGTATCCGCATGTGTGAAAGCTTTACTCGATGCCGGAATC
AACTATGATGATGTTGATCAGGGAGTTGGGTGTTATGTGTTTGGTGACTCTGCTGGCGCACAGCGTGTTTTCTAC
ACCCTGGGGATGACTGGAGTTCCCATTTACAATGTTCATAACTACTGCAGCGCAGGGAGTACGGGCCTGTATATG
GCCAATCAGTTTATTCAGGCCGGCAGTGCTGATTGTGTCCTTGTGGTGGGATTTGACAAAATGTATCCTGGTGCT
CTTCCACAGATTTATAAGGATAGGGAGAATCCCCTGGGAAGAATTCTGGCTCTTTCGAAGCGTTTTATTCCCGAA
GGTCAAGCAGAATCAGCTGGCTGGACACCTCAGCTATATGCCAACGCCCAAGCTGAGTACCTGGAAAAATACGGG
TCGAACGGAGCAAAAGCAGAGCATTTCGCCGCTATTGCCTCCACTAACCGTACGCATGGCATGAACAATCCATAC
AGTCAGCTGCGTCAGTCTGTGACGACCAAGGAAGTTTCATCGAGTCCACAGGTGTCGGGATCGATTACTCGGCTA
CAATGCTGTCCATCCTCGGTAAGTACATATTCTTATCAAACCCCGCCTGCATACACCAGTGTGTACTAATATGAT
AGACCGGAGCTGCCGCCACGGTCCTAGTGTCGGAGCGTTTCCTGCAAGCTCATCCCTACCTGAAGGGAAGCGCAA
TTGCCATTAGGGGCCAAGCCCTTGCAACTGACTCTCGGGATTTGTATGAGCCCGCGAGCGCCATCGAGCTGATTG
GGTCCAATATGACAAGACGTGCTGCCCAGAATGCCTTCAAGCAGGCTTCACTATCACCCAAAGATATCCAAGTGA
TTGAGCTGCATGATTGCTTTACGACAAACGAGATGTGTGCGATCGAAGACTTGGGCCTAGCTCCACACGGCGAAG
GGTGGAAGCTGGTCGCCGGTGGAGGCATCACGTATGATCAAAGTTCTAAAACGAAAAGAACGTCTCCAGGATGGA
TCATCAATCCCAGTGGCGGATTGATTTCCAAGGGTCATCCGCTGGGAGCGACAGGCCTTGCTCAAACGGCCGAGT
TAGGTACCTTCAATTCAACCCATTTATATAGGGGATTATGCTAATGTAGATTTAGTATGGCATCTACGTGGCTGG
GCATCAAACCGTTGTGTACCGCAGACCAAATACTGCCTGCAGCACAACATGGGCCTCGGGGGTGCTACAGTTGTC
ACTGTTTTAGGTCGTGCCGATGACAAAGTTGCACCCTTGTCGTCTGAAATCCAGGATCAGGTTGACGGACGACGA
CGTCTCGGATATAACCCAGCTCTGGAGGCAAGGGGAGTAAACAAGCAGGATATCGAGGCCGTGAAATCTCGAAAG
GCATTTAGTAATTGGGCTGCCGACACATTCGAAGCTCTGGGAAATCCACGTGAAGTTAGATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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