Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4803.t1
Gene name
Locationscaffold_10:436090..437154
Strand-
Gene length (bp)1064
Transcript length (bp)768
Coding sequence length (bp)768
Protein length (aa) 256

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 GPI-anchored Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family 3.1E-20 22 115

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4803.t1
MRFSTILSLLPLALSVGAIQVTEPSKGDDLDLSKSFTVKWTSVNTDASTVDIVLVNNAVYPPVDEKIASGIDTSK
GSYTASGLKDVSNGSGFQINLLSTEAKNTGILAQSEQFNVTAESSSSSTTTGTSSTVSSSSTASTSVVSTGTTST
ASTSTASTSTSTGASTTETEASTTATGTSTGISTGTTTGTTTGTSTGSSTTETTTGTTTGLTTSTSTTTGTSTSS
ASPSASSGAAMGLVAPATAAGLLAGVLALL*
Coding >Pro_DTO377G3_2|g4803.t1
ATGCGTTTCTCCACCATTCTGTCTCTCCTGCCTTTGGCCCTTTCCGTTGGAGCTATCCAGGTCACCGAGCCCTCC
AAGGGCGACGACCTCGATCTGTCCAAATCTTTCACCGTGAAATGGACATCCGTCAACACCGACGCCTCCACTGTT
GACATCGTCCTTGTCAACAATGCCGTCTACCCCCCCGTCGATGAGAAGATTGCCTCTGGCATCGACACCTCCAAG
GGCTCTTACACTGCCAGTGGTCTGAAGGACGTCAGCAATGGTTCCGGTTTCCAGATCAACCTGCTCTCCACTGAG
GCCAAGAACACCGGCATCCTCGCTCAGTCCGAGCAGTTCAATGTGACCGCCGAGAGCTCCTCCAGCTCTACTACT
ACCGGTACATCTTCCACTGTCTCCTCCTCTTCTACTGCCTCTACCTCTGTTGTCTCCACTGGTACCACTTCCACT
GCTTCTACATCTACTGCCTCTACTTCCACTTCCACTGGTGCCTCCACCACTGAAACCGAGGCTTCCACTACTGCT
ACCGGAACTTCTACCGGAATTTCTACCGGAACTACTACTGGCACCACCACCGGCACCTCTACCGGCAGCTCTACT
ACCGAAACCACCACCGGCACCACCACCGGTCTGACCACCAGCACTTCCACCACCACCGGCACTTCTACCAGCTCT
GCCTCTCCCTCTGCCTCCAGCGGTGCCGCTATGGGTCTGGTTGCCCCCGCTACCGCCGCTGGTCTTCTGGCTGGT
GTCCTCGCTCTCCTGTAA
Transcript >Pro_DTO377G3_2|g4803.t1
ATGCGTTTCTCCACCATTCTGTCTCTCCTGCCTTTGGCCCTTTCCGTTGGAGCTATCCAGGTCACCGAGCCCTCC
AAGGGCGACGACCTCGATCTGTCCAAATCTTTCACCGTGAAATGGACATCCGTCAACACCGACGCCTCCACTGTT
GACATCGTCCTTGTCAACAATGCCGTCTACCCCCCCGTCGATGAGAAGATTGCCTCTGGCATCGACACCTCCAAG
GGCTCTTACACTGCCAGTGGTCTGAAGGACGTCAGCAATGGTTCCGGTTTCCAGATCAACCTGCTCTCCACTGAG
GCCAAGAACACCGGCATCCTCGCTCAGTCCGAGCAGTTCAATGTGACCGCCGAGAGCTCCTCCAGCTCTACTACT
ACCGGTACATCTTCCACTGTCTCCTCCTCTTCTACTGCCTCTACCTCTGTTGTCTCCACTGGTACCACTTCCACT
GCTTCTACATCTACTGCCTCTACTTCCACTTCCACTGGTGCCTCCACCACTGAAACCGAGGCTTCCACTACTGCT
ACCGGAACTTCTACCGGAATTTCTACCGGAACTACTACTGGCACCACCACCGGCACCTCTACCGGCAGCTCTACT
ACCGAAACCACCACCGGCACCACCACCGGTCTGACCACCAGCACTTCCACCACCACCGGCACTTCTACCAGCTCT
GCCTCTCCCTCTGCCTCCAGCGGTGCCGCTATGGGTCTGGTTGCCCCCGCTACCGCCGCTGGTCTTCTGGCTGGT
GTCCTCGCTCTCCTGTAA
Gene >Pro_DTO377G3_2|g4803.t1
ATGCGTTTCTCCACCATTCTGTCTCTCCTGCCTTTGGCCCTTTCCGTTGGAGGTATGTAAATCACCATATGACGC
GAGACTCTCTCTAATAATCAGTCTAGCTATCCAGGTCACCGAGCCCTCCAAGGGCGACGACCTCGATCTGTCCAA
ATCTTTCACCGTGAAATGGACATCCGTCAAGTATGTCGACTATGATCACTCACATCTTACACTAGCCATGACAGC
CAAAACTAACCAATTACAGCACCGACGCCTCCACTGTTGACATCGTCCTTGTCAACAATGCCGTCTACCCCCCCG
TCGATGAGAAGATTGCCTCTGGCATCGACACCTCCAAGGGCTCTTACACTGCCAGTGGTCTGAAGGACGTCAGCA
ATGGGTAAGATCGCCTTTGTGGCGCGTCGATTGTATGTCTACTAACACTTAATGTACACTGCAGTTCCGGTTTCC
AGATCAACCTGCTCTCCACTGAGGCCAAGAACACCGGCATCCTCGCTCAGTCCGAGCAGTTCAATGTGACCGCCG
AGAGCTCCTCCAGCTCTACTACTACCGGTACATCTTCCACTGTCTCCTCCTCTTCTACTGCCTCTACCTCTGTTG
TCTCCACTGGTACCACTTCCACTGCTTCTACATCTACTGCCTCTACTTCCACTTCCACTGGTGCCTCCACCACTG
AAACCGAGGCTTCCACTACTGGTACTTCCACCCTGGACGTGTCTATCATCAAACCCTCCCCCACCGGAACCCTTA
CCTCTGGCTCCCTTACTACTAGTCCCCCCACCCCTGGCAAGCACAGCACTGATACCTCTGTACGTACAGCTACCG
GAACTTCTACCGGAATTTCTACCGGAACTACTACTGGCACCACCACCGGCACCTCTACCGGCAGCTCTACTACCG
AAACCACCACCGGCACCACCACCGGTCTGACCACCAGCACTTCCACCACCACCGGCACTTCTACCAGCTCTGCCT
CTCCCTCTGCCTCCAGCGGTGCCGCTATGGGTCTGGTTGCCCCCGCTACCGCCGCTGGTCTTCTGGCTGGTGTCC
TCGCTCTCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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