Protein ID | Pro_DTO377G3_2|g4794.t1 |
Gene name | |
Location | scaffold_10:417049..420093 |
Strand | + |
Gene length (bp) | 3044 |
Transcript length (bp) | 2817 |
Coding sequence length (bp) | 2817 |
Protein length (aa) | 939 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05383 | La | La domain | 1.7E-19 | 588 | 641 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g4794.t1 MSTFSYAQAAKGVSGTPALSKTPSESEKTDSKPEEHTTVETTTDEAPAPTESEPVQQPEVVAEENKDDDFTTVTN KHAAKTKAINSRTSSPSVRTGSKARKSKEDDSHTPNGNADATAEKQAPSEGQTEKAEGAAEKSAEKSEDSEKIAS PPKELKAAPLPSVNIWQQRREAQDAKVKAVPKSTSTSKAASTKAASTADETQQDSKTGSKKKGADGAQEGAKDRK KTDGGKGRDAGSVPPVEDATAWPTPQVAIGEEKKKSHEKTEKSPVIRPHGKEKWTPVPYVPTAVFNTPLPSAGGR GGRRATRGGRDSGRGAHGNGTATTDKAASGQAAQGAKQSPGDRGRLESGSGRAASLPAQSRRSTSTDAGATADAR KASQAPERGRGARNGEENNKQVNGGENGPRPQREGKPIGRSQDARAGDRNQKGANLAVDLQAAARGNDRRFEAGS KSADPTGLTDFSRERGEFRSERGGRGSNRGRGGAYANFGGQNAQFNASMSNNPFPAPKSFGFNERQRSHQHGLPN GAQQGNRMPLRSPSVPTPANMYGVVYPFPGDINTMYGYPAAPMSAVPYQQYVEPFSLMNMLSMQLEYYFSVDNMC KDMFLRKQMDSQGFVPLNVLASFKRVKSLTEDFELIRHVSRQLRNVECQTGEDGVDRLRPRDKWQQWVLPVDQRE PAAQNEGAAPARKTDENTPVHGHSENVINGSARQIHALIATYCSERNCQSRGLDSQSEPPFPFDLESMVSPTSSD ADCFQYQVGGTDWLISKSFAEAHQPAPKSNGKGRSSTQTSNYVPKTFNMSRKETFDGRGRQMSRRYSIGMTQPYE SWSFSLTKNFNSHLYNEFRRSALDDLLTRHVDNGFNELMEFYRNCLLHRRHIPDLVLYDMVYLSQGQTSDYHTLV SNTIHETIASGKMKLHNWGRISKYFDTQLGKTAGEKLS* |
Coding | >Pro_DTO377G3_2|g4794.t1 ATGTCTACGTTTTCGTACGCACAAGCCGCCAAGGGCGTCTCCGGGACACCGGCCCTGTCTAAGACACCATCAGAA TCCGAGAAGACTGACTCCAAACCGGAGGAACACACCACCGTCGAGACTACAACTGATGAAGCACCGGCCCCCACA GAGTCCGAGCCCGTTCAACAACCCGAGGTAGTCGCAGAGGAGAACAAGGATGATGATTTCACCACTGTCACGAAC AAGCATGCCGCCAAGACAAAGGCTATCAACTCTCGAACATCAAGCCCGAGCGTTCGCACAGGCTCAAAGGCGCGC AAGTCAAAGGAGGATGATTCCCATACCCCTAATGGCAACGCAGATGCCACCGCTGAGAAGCAGGCTCCCAGTGAG GGACAGACCGAGAAGGCCGAAGGTGCCGCAGAGAAGTCCGCTGAAAAATCCGAGGATTCCGAGAAGATCGCATCA CCACCCAAGGAGCTGAAGGCTGCTCCTCTCCCATCAGTCAACATTTGGCAACAGAGACGAGAGGCCCAGGATGCC AAGGTCAAGGCTGTCCCCAAATCCACCTCCACTAGCAAGGCCGCCTCCACGAAGGCCGCCTCGACTGCTGATGAG ACCCAGCAAGACTCCAAGACCGGCTCTAAGAAGAAGGGTGCCGATGGTGCACAGGAAGGCGCCAAGGATCGCAAG AAGACCGATGGTGGAAAAGGACGCGATGCCGGATCAGTTCCCCCAGTAGAAGACGCTACTGCATGGCCCACTCCC CAAGTTGCGATTGGCGAAGAGAAGAAGAAGTCTCACGAAAAGACCGAAAAGAGCCCTGTCATTAGACCTCATGGA AAAGAAAAGTGGACACCAGTTCCTTACGTTCCTACTGCTGTTTTCAACACCCCGCTCCCATCTGCTGGTGGTCGT GGAGGTAGACGGGCTACCCGTGGTGGCCGGGACAGCGGCCGTGGAGCTCATGGAAATGGAACCGCTACCACCGAT AAGGCTGCCTCTGGACAGGCCGCCCAAGGCGCAAAGCAGTCACCTGGAGACCGAGGACGCCTCGAGTCTGGATCT GGACGTGCCGCTTCTCTTCCCGCGCAATCGCGACGGTCCACAAGCACTGATGCCGGTGCCACAGCCGATGCACGC AAGGCTTCCCAGGCACCCGAGCGCGGCCGTGGTGCTCGCAACGGAGAGGAGAACAACAAGCAGGTGAATGGTGGC GAGAACGGCCCCCGCCCTCAACGCGAGGGCAAGCCCATTGGAAGAAGCCAGGATGCCCGTGCAGGAGACCGCAAC CAGAAGGGTGCCAACCTGGCTGTTGACTTGCAGGCTGCAGCCCGTGGCAATGACCGTCGCTTCGAGGCTGGATCC AAGTCTGCCGACCCCACCGGTCTCACTGACTTTAGCCGTGAACGTGGAGAGTTCCGATCTGAGCGTGGAGGTCGT GGATCTAACCGCGGCCGTGGTGGTGCCTACGCCAACTTCGGCGGCCAGAATGCCCAGTTCAATGCGTCTATGTCT AACAACCCATTCCCTGCGCCTAAGTCGTTCGGCTTCAACGAGCGTCAGCGGTCACACCAGCACGGCCTCCCCAAT GGAGCTCAACAAGGAAACCGTATGCCCCTCCGATCGCCCTCTGTGCCCACTCCCGCAAACATGTACGGTGTTGTT TATCCTTTCCCAGGTGATATCAACACGATGTATGGCTACCCAGCTGCCCCGATGAGCGCTGTTCCCTACCAGCAA TATGTGGAGCCTTTCTCGCTCATGAATATGCTCTCCATGCAATTGGAGTACTACTTCTCGGTTGACAACATGTGC AAGGACATGTTCCTTCGGAAGCAGATGGATTCCCAGGGCTTTGTTCCTCTGAACGTCCTTGCCAGCTTTAAGCGT GTCAAGTCCCTCACTGAGGACTTTGAGCTCATTCGTCACGTGTCCCGTCAGCTCCGTAACGTTGAGTGCCAGACT GGCGAGGATGGTGTCGATCGCCTGCGCCCCAGAGACAAGTGGCAGCAGTGGGTCCTCCCCGTGGATCAGCGTGAG CCTGCTGCCCAGAATGAGGGCGCCGCCCCTGCTAGAAAGACCGACGAGAACACCCCGGTTCACGGCCACTCCGAG AACGTTATCAACGGATCCGCTCGTCAAATTCATGCCCTCATTGCTACCTACTGCAGTGAACGAAATTGCCAATCG CGTGGACTAGATTCGCAGTCCGAACCCCCTTTCCCCTTTGATTTGGAATCGATGGTGTCCCCGACAAGCTCTGAT GCAGATTGCTTTCAATACCAAGTCGGCGGTACTGATTGGTTGATCAGCAAGTCTTTTGCCGAAGCGCATCAACCG GCGCCTAAGTCAAATGGGAAGGGCCGTTCGTCCACACAAACGTCAAATTATGTCCCAAAAACTTTCAATATGTCT CGCAAAGAAACCTTCGATGGCCGAGGCCGACAGATGTCAAGAAGGTATAGCATTGGAATGACCCAGCCTTACGAA TCCTGGTCATTCAGCTTGACAAAAAATTTCAATTCGCATTTGTACAATGAATTTAGGCGTTCAGCCCTTGATGAT CTTTTGACTCGACACGTTGACAACGGTTTCAACGAGCTCATGGAGTTTTATCGGAACTGTTTGCTTCACCGTCGC CACATTCCTGACCTCGTTCTGTACGACATGGTCTATCTTTCACAAGGTCAAACATCGGACTACCACACTCTCGTC TCCAATACGATCCATGAAACCATTGCCAGTGGAAAGATGAAATTACACAATTGGGGGAGAATCAGCAAATATTTC GATACCCAACTGGGCAAGACGGCGGGAGAAAAGTTATCATGA |
Transcript | >Pro_DTO377G3_2|g4794.t1 ATGTCTACGTTTTCGTACGCACAAGCCGCCAAGGGCGTCTCCGGGACACCGGCCCTGTCTAAGACACCATCAGAA TCCGAGAAGACTGACTCCAAACCGGAGGAACACACCACCGTCGAGACTACAACTGATGAAGCACCGGCCCCCACA GAGTCCGAGCCCGTTCAACAACCCGAGGTAGTCGCAGAGGAGAACAAGGATGATGATTTCACCACTGTCACGAAC AAGCATGCCGCCAAGACAAAGGCTATCAACTCTCGAACATCAAGCCCGAGCGTTCGCACAGGCTCAAAGGCGCGC AAGTCAAAGGAGGATGATTCCCATACCCCTAATGGCAACGCAGATGCCACCGCTGAGAAGCAGGCTCCCAGTGAG GGACAGACCGAGAAGGCCGAAGGTGCCGCAGAGAAGTCCGCTGAAAAATCCGAGGATTCCGAGAAGATCGCATCA CCACCCAAGGAGCTGAAGGCTGCTCCTCTCCCATCAGTCAACATTTGGCAACAGAGACGAGAGGCCCAGGATGCC AAGGTCAAGGCTGTCCCCAAATCCACCTCCACTAGCAAGGCCGCCTCCACGAAGGCCGCCTCGACTGCTGATGAG ACCCAGCAAGACTCCAAGACCGGCTCTAAGAAGAAGGGTGCCGATGGTGCACAGGAAGGCGCCAAGGATCGCAAG AAGACCGATGGTGGAAAAGGACGCGATGCCGGATCAGTTCCCCCAGTAGAAGACGCTACTGCATGGCCCACTCCC CAAGTTGCGATTGGCGAAGAGAAGAAGAAGTCTCACGAAAAGACCGAAAAGAGCCCTGTCATTAGACCTCATGGA AAAGAAAAGTGGACACCAGTTCCTTACGTTCCTACTGCTGTTTTCAACACCCCGCTCCCATCTGCTGGTGGTCGT GGAGGTAGACGGGCTACCCGTGGTGGCCGGGACAGCGGCCGTGGAGCTCATGGAAATGGAACCGCTACCACCGAT AAGGCTGCCTCTGGACAGGCCGCCCAAGGCGCAAAGCAGTCACCTGGAGACCGAGGACGCCTCGAGTCTGGATCT GGACGTGCCGCTTCTCTTCCCGCGCAATCGCGACGGTCCACAAGCACTGATGCCGGTGCCACAGCCGATGCACGC AAGGCTTCCCAGGCACCCGAGCGCGGCCGTGGTGCTCGCAACGGAGAGGAGAACAACAAGCAGGTGAATGGTGGC GAGAACGGCCCCCGCCCTCAACGCGAGGGCAAGCCCATTGGAAGAAGCCAGGATGCCCGTGCAGGAGACCGCAAC CAGAAGGGTGCCAACCTGGCTGTTGACTTGCAGGCTGCAGCCCGTGGCAATGACCGTCGCTTCGAGGCTGGATCC AAGTCTGCCGACCCCACCGGTCTCACTGACTTTAGCCGTGAACGTGGAGAGTTCCGATCTGAGCGTGGAGGTCGT GGATCTAACCGCGGCCGTGGTGGTGCCTACGCCAACTTCGGCGGCCAGAATGCCCAGTTCAATGCGTCTATGTCT AACAACCCATTCCCTGCGCCTAAGTCGTTCGGCTTCAACGAGCGTCAGCGGTCACACCAGCACGGCCTCCCCAAT GGAGCTCAACAAGGAAACCGTATGCCCCTCCGATCGCCCTCTGTGCCCACTCCCGCAAACATGTACGGTGTTGTT TATCCTTTCCCAGGTGATATCAACACGATGTATGGCTACCCAGCTGCCCCGATGAGCGCTGTTCCCTACCAGCAA TATGTGGAGCCTTTCTCGCTCATGAATATGCTCTCCATGCAATTGGAGTACTACTTCTCGGTTGACAACATGTGC AAGGACATGTTCCTTCGGAAGCAGATGGATTCCCAGGGCTTTGTTCCTCTGAACGTCCTTGCCAGCTTTAAGCGT GTCAAGTCCCTCACTGAGGACTTTGAGCTCATTCGTCACGTGTCCCGTCAGCTCCGTAACGTTGAGTGCCAGACT GGCGAGGATGGTGTCGATCGCCTGCGCCCCAGAGACAAGTGGCAGCAGTGGGTCCTCCCCGTGGATCAGCGTGAG CCTGCTGCCCAGAATGAGGGCGCCGCCCCTGCTAGAAAGACCGACGAGAACACCCCGGTTCACGGCCACTCCGAG AACGTTATCAACGGATCCGCTCGTCAAATTCATGCCCTCATTGCTACCTACTGCAGTGAACGAAATTGCCAATCG CGTGGACTAGATTCGCAGTCCGAACCCCCTTTCCCCTTTGATTTGGAATCGATGGTGTCCCCGACAAGCTCTGAT GCAGATTGCTTTCAATACCAAGTCGGCGGTACTGATTGGTTGATCAGCAAGTCTTTTGCCGAAGCGCATCAACCG GCGCCTAAGTCAAATGGGAAGGGCCGTTCGTCCACACAAACGTCAAATTATGTCCCAAAAACTTTCAATATGTCT CGCAAAGAAACCTTCGATGGCCGAGGCCGACAGATGTCAAGAAGGTATAGCATTGGAATGACCCAGCCTTACGAA TCCTGGTCATTCAGCTTGACAAAAAATTTCAATTCGCATTTGTACAATGAATTTAGGCGTTCAGCCCTTGATGAT CTTTTGACTCGACACGTTGACAACGGTTTCAACGAGCTCATGGAGTTTTATCGGAACTGTTTGCTTCACCGTCGC CACATTCCTGACCTCGTTCTGTACGACATGGTCTATCTTTCACAAGGTCAAACATCGGACTACCACACTCTCGTC TCCAATACGATCCATGAAACCATTGCCAGTGGAAAGATGAAATTACACAATTGGGGGAGAATCAGCAAATATTTC GATACCCAACTGGGCAAGACGGCGGGAGAAAAGTTATCATGA |
Gene | >Pro_DTO377G3_2|g4794.t1 ATGTCTACGTTTTCGTACGCACAAGCCGCCAAGGGCGTCTCCGGGACACCGGCCCTGTCTAAGACACCATCAGAA TCCGAGAAGACTGACTCCAAACCGGAGGAACACACCACCGTCGAGACTACAACTGATGAAGCACCGGCCCCCACA GAGTCCGAGCCCGTTCAACAACCCGAGGTAGTCGCAGAGGAGAACAAGGATGATGATTTCACCACTGTCACGAAC AAGCATGCCGCCAAGACAAAGGCTATCAACTCTCGAACATCAAGCCCGAGCGTTCGCACAGGCTCAAAGGCGCGC AAGTCAAAGGAGGATGATTCCCATACCCCTAATGGCAACGCAGATGCCACCGCTGAGAAGCAGGCTCCCAGTGAG GGACAGACCGAGAAGGCCGAAGGTGCCGCAGAGAAGTCCGCTGAAAAATCCGAGGATTCCGAGAAGATCGCATCA CCACCCAAGGAGCTGAAGGCTGCTCCTCTCCCATCAGTCAACATTTGGCAACAGAGACGAGAGGCCCAGGATGCC AAGGTCAAGGCTGTCCCCAAATCCACCTCCACTAGCAAGGCCGCCTCCACGAAGGCCGCCTCGACTGCTGATGAG ACCCAGCAAGACTCCAAGACCGGCTCTAAGAAGAAGGGTGCCGATGGTGCACAGGAAGGCGCCAAGGATCGCAAG AAGACCGATGGTGGAAAAGGACGCGATGCCGGATCAGTTCCCCCAGTAGAAGACGCTACTGCATGGCCCACTCCC CAAGTTGCGATTGGCGAAGAGAAGAAGAAGTCTCACGAAAAGACCGAAAAGAGCCCTGTCATTAGACCTCATGGA AAAGAAAAGTGGACACCAGTTCCTTACGTTCCTACTGCTGTTTTCAACACCCCGCTCCCATCTGCTGGTGGTCGT GGAGGTAGACGGGCTACCCGTGGTGGCCGGGACAGCGGCCGTGGAGCTCATGGAAATGGAACCGCTACCACCGAT AAGGCTGCCTCTGGACAGGCCGCCCAAGGCGCAAAGCAGTCACCTGGAGACCGAGGACGCCTCGAGTCTGGATCT GGACGTGCCGCTTCTCTTCCCGCGCAATCGCGACGGTCCACAAGCACTGATGCCGGTGCCACAGCCGATGCACGC AAGGCTTCCCAGGCACCCGAGCGCGGCCGTGGTGCTCGCAACGGAGAGGAGAACAACAAGCAGGTGAATGGTGGC GAGAACGGCCCCCGCCCTCAACGCGAGGGCAAGCCCATTGGAAGAAGCCAGGATGCCCGTGCAGGAGACCGCAAC CAGAAGGGTGCCAACCTGGCTGTTGACTTGCAGGCTGCAGCCCGTGGCAATGACCGTCGCTTCGAGGCTGGATCC AAGTCTGCCGACCCCACCGGTCTCACTGACTTTAGCCGTGAACGTGGAGAGTTCCGATCTGAGCGTGGAGGTCGT GGATCTAACCGCGGCCGTGGTGGTGCCTACGCCAACTTCGGCGGCCAGAATGCCCAGTTCAATGCGTCTATGTCT AACAACCCATTCCCTGCGCCTAAGTCGTTCGGCTTCAACGAGCGTCAGCGGTCACACCAGCACGGCCTCCCCAAT GGAGCTCAACAAGGAAACCGTATGCCCCTCCGATCGCCCTCTGTGCCCACTCCCGCAAACATGTACGGTGTTGTT TATCCTTTCCCAGGTGATATCAACACGATGTATGGCTACCCAGCTGCCCCGATGAGCGCTGTTCCCTACCAGCAA TATGTGGAGCCTTTCTCGCTCATGAATATGCTCTCCATGCAATTGGAGTACTACTTCTCGGTTGACAACATGTGC AAGGACATGTTCCTTCGGAAGCAGATGGATTCCCAGGGCTTTGTTCCTCTGAACGTCCTTGCCAGCTTTAAGCGT GTCAAGTCCCTCACTGAGGACTTTGAGCTCATTCGTCACGTGTCCCGTCAGCTCCGTAACGTTGAGTGCCAGACT GGCGAGGATGGTGTCGATCGCCTGCGCCCCAGAGACAAGTGGCAGCAGTGGGTCCTCCCCGTGGATCAGCGTGAG CCTGCTGCCCAGAATGAGGGCGCCGCCCCTGCTAGAAAGACCGACGAGAACACCCCGGTTCACGGCCACTCCGAG AACGTTATCAACGGATCCGCTCGTCAGTTCGTTCCCAACGGTGTCGCCCATGATGTCAAGACTTCACTTTCGTCT ACCGCTCCAGAATTCATGCCCTCATTGCTACCTACTGCAGTGAACGAAATTGCCAATGTAGGATACCCCTGGAAC TTCCCAGTCTCCCCTGATGATTCGAGAATGTCGTTCTTTTCGTCTTCTTCGTCTTTCCCTAATTTAATTATTGAC TCTTCTTTCTCAGCGCGTGGACTAGATTCGCAGTCCGAACCCCCTTTCCCCTTTGATTTGGAATCGATGGTGTCC CCGACAAGGTATGCTGAATTTTTTGCATGTGAAATATATTATGTGCGGTACTGACTCACTGTACGAACAGCTCTG ATGCAGATTGCTTTCAATACCAAGTCGGCGGTACTGATTGGTTGATCAGCAAGTCTTTTGCCGAAGCGCATCAAC CGGCGCCTAAGTCAAATGGGAAGGGCCGTTCGTCCACACAAACGTCAAATTATGTCCCAAAAACTTTCAATATGT CTCGCAAAGAAACCTTCGATGGCCGAGGCCGACAGATGTCAAGAAGGTATAGCATTGGAATGACCCAGCCTTACG AATCCTGGTCATTCAGCTTGACAAAAAATTTCAATTCGCATTTGTACAATGAATTTAGGCGTTCAGCCCTTGATG ATCTTTTGACTCGACACGTTGACAACGGTTTCAACGAGCTCATGGAGTTTTATCGGAACTGTTTGCTTCACCGTC GCCACATTCCTGACCTCGTTCTGTACGACATGGTCTATCTTTCACAAGGTCAAACATCGGACTACCACACTCTCG TCTCCAATACGATCCATGAAACCATTGCCAGTGGAAAGATGAAATTACACAATTGGGGGAGAATCAGCAAATATT TCGATACCCAACTGGGCAAGACGGCGGGAGAAAAGTTATCATGA |