Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4787.t1
Gene name
Locationscaffold_10:401304..402211
Strand-
Gene length (bp)907
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.5E-08 9 137

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4787.t1
MLSAAHGFALVTPASRGLGFAFAQQLLTRTELPVIATARKNCDELKERLLASKGMPKDAEQRLRILQVDVTDEST
ISAMADTIRQKYPNTPLRLGLTIPGILHAEKSPSQIDAANALESFKVNSLGPLLLLKHLSQFVPLRSAPKFPTIE
VSSAINSQGPLGLPSHAIYAMMAARVGSISDNASGGWYSYRASKAAVFQLAKTFDLYLRTKSAERAIAVALHPGT
VHTEFTKDYWGTREMLEPADAADKLLEVLVGLSPEAKGGRGRCWDWMGKEVLP*
Coding >Pro_DTO377G3_2|g4787.t1
ATGTTATCGGCAGCTCATGGATTCGCGCTAGTAACCCCTGCCTCGCGAGGATTGGGGTTCGCCTTCGCACAGCAG
CTCCTGACACGGACAGAGCTCCCGGTGATCGCAACAGCCCGCAAGAACTGCGATGAACTTAAAGAACGACTGCTG
GCAAGCAAGGGTATGCCAAAAGACGCGGAACAGAGGCTCCGTATTCTCCAAGTTGATGTAACAGATGAGTCTACG
ATATCAGCAATGGCAGACACAATCCGCCAGAAATACCCGAACACACCACTCAGGCTCGGATTGACAATCCCCGGC
ATTTTACATGCGGAAAAATCGCCTAGCCAAATCGATGCTGCCAATGCGCTGGAGAGCTTCAAAGTCAATTCCCTC
GGCCCGTTGCTACTCCTGAAGCATCTTTCCCAATTCGTTCCATTGCGATCCGCACCGAAATTCCCGACAATAGAG
GTTAGCTCTGCAATCAATTCCCAAGGGCCGCTCGGGCTGCCCTCGCATGCCATTTATGCAATGATGGCTGCCCGA
GTCGGCTCAATATCCGACAATGCATCGGGCGGATGGTATTCCTACCGTGCAAGTAAGGCAGCTGTATTCCAATTG
GCCAAGACTTTTGATTTGTATTTGCGCACGAAGAGTGCGGAAAGGGCAATTGCTGTGGCCTTGCACCCTGGGACT
GTGCACACGGAGTTCACCAAGGATTATTGGGGAACGAGGGAAATGCTGGAGCCGGCCGATGCAGCCGACAAGCTG
TTGGAGGTGCTTGTGGGGTTATCACCCGAGGCTAAAGGAGGGAGAGGGAGGTGTTGGGATTGGATGGGGAAGGAG
GTTTTGCCGTGA
Transcript >Pro_DTO377G3_2|g4787.t1
ATGTTATCGGCAGCTCATGGATTCGCGCTAGTAACCCCTGCCTCGCGAGGATTGGGGTTCGCCTTCGCACAGCAG
CTCCTGACACGGACAGAGCTCCCGGTGATCGCAACAGCCCGCAAGAACTGCGATGAACTTAAAGAACGACTGCTG
GCAAGCAAGGGTATGCCAAAAGACGCGGAACAGAGGCTCCGTATTCTCCAAGTTGATGTAACAGATGAGTCTACG
ATATCAGCAATGGCAGACACAATCCGCCAGAAATACCCGAACACACCACTCAGGCTCGGATTGACAATCCCCGGC
ATTTTACATGCGGAAAAATCGCCTAGCCAAATCGATGCTGCCAATGCGCTGGAGAGCTTCAAAGTCAATTCCCTC
GGCCCGTTGCTACTCCTGAAGCATCTTTCCCAATTCGTTCCATTGCGATCCGCACCGAAATTCCCGACAATAGAG
GTTAGCTCTGCAATCAATTCCCAAGGGCCGCTCGGGCTGCCCTCGCATGCCATTTATGCAATGATGGCTGCCCGA
GTCGGCTCAATATCCGACAATGCATCGGGCGGATGGTATTCCTACCGTGCAAGTAAGGCAGCTGTATTCCAATTG
GCCAAGACTTTTGATTTGTATTTGCGCACGAAGAGTGCGGAAAGGGCAATTGCTGTGGCCTTGCACCCTGGGACT
GTGCACACGGAGTTCACCAAGGATTATTGGGGAACGAGGGAAATGCTGGAGCCGGCCGATGCAGCCGACAAGCTG
TTGGAGGTGCTTGTGGGGTTATCACCCGAGGCTAAAGGAGGGAGAGGGAGGTGTTGGGATTGGATGGGGAAGGAG
GTTTTGCCGTGA
Gene >Pro_DTO377G3_2|g4787.t1
ATGTTATCGGCAGCTCATGGATTCGCGCTAGTAACCCCTGCCTCGCGAGGATTGGGGTTCGCCTTCGCACAGCAG
CTCCTGACACGGACAGAGCTCCCGGTGATCGCAACAGCCCGCAAGAACTGCGATGAACTTAAAGAACGACTGCTG
GCAAGCAAGGGTATGCCAAAAGACGCGGAACAGAGGCTCCGTATTCTCCAAGTTGATGTAACAGGTAAGAAAAAG
CAACTTAATTCTTCGAAAATAAATTCTTCTCTGCATCAGAACGCTAATCGACTTCCTAGATGAGTCTACGATATC
AGCAATGGCAGACACAATCCGCCAGAAATACCCGAACACACCACTCAGGCTCGGATTGACAATCCCCGGCATTTT
ACATGCGGAAAAATCGCCTAGCCAAATCGATGCTGCCAATGCGCTGGAGAGCTTCAAAGTCAATTCCCTCGGCCC
GTTGCTACTCCTGAAGCATCTTTCCCAATTCGTTCCATTGCGATCCGCACCGAAATTCCCGACAATAGAGGTTAG
CTCTGCAATCAATTCCCAAGGGCCGCTCGGGCTGCCCTCGCATGCCATTTATGCAATGATGGCTGCCCGAGTCGG
CTCAATATCCGACAATGCATCGGGCGGATGGTATTCCTACCGTGCAAGTAAGGCAGCTGTATTCCAATTGGCCAA
GACTTTTGATTTGTATTTGCGCACGAAGAGTGCGGAAAGGGCAATTGCTGTGGCCTTGCACCCTGGGACTGTGCA
CACGGAGTTCACCAAGGATTATTGGGGAACGAGGGAAATGCTGGAGCCGGCCGATGCAGCCGACAAGCTGTTGGA
GGTGCTTGTGGGGTTATCACCCGAGGCTAAAGGAGGGAGAGGGAGGTGTTGGGATTGGATGGGGAAGGAGGTTTT
GCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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