Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4777.t1
Gene name
Locationscaffold_10:372743..373717
Strand-
Gene length (bp)974
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12874 zf-met Zinc-finger of C2H2 type 4.8E-03 29 48
PF12874 zf-met Zinc-finger of C2H2 type 5.3E-03 57 81
PF12874 zf-met Zinc-finger of C2H2 type 1.7E-02 88 110
PF12874 zf-met Zinc-finger of C2H2 type 4.4E-03 114 137
PF12874 zf-met Zinc-finger of C2H2 type 1.5E-05 219 243
PF12171 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 4.0E-05 113 138
PF13912 zf-C2H2_6 C2H2-type zinc finger 1.4E-02 29 53
PF13912 zf-C2H2_6 C2H2-type zinc finger 8.1E-02 221 237

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4777.t1
MFECITCDAVFWDQDDCDEHMDDERHWIECETCNRSFRTQNACNQHMNAVDHWAPTFDCETCNSTFRTQHAANNH
MNAKSHWLPKVPCEACPMKFYTQQAVENHMSAKGHYKNYCQECSRQFMNANCLRQHLNSKIHRGTNIACPFCRVG
FVTASGVSHHLESGACPQAQGLNRDRIHRIIQQLDPNGIVCKKQIAWHGEHEQDMTYLVTDNAWNGSCWVCYLCK
KGFNSPKALGSHVNSPVHNEKVYHCLKRGCPKEFHSLASLFNHLESESCGFIRFEGVQQVHRQLNDAIMGRRTIT
GF*
Coding >Pro_DTO377G3_2|g4777.t1
ATGTTCGAATGCATCACCTGCGATGCAGTATTCTGGGATCAGGATGACTGTGATGAGCATATGGATGACGAACGT
CACTGGATCGAATGTGAAACATGCAATCGATCGTTCCGCACCCAGAACGCTTGCAATCAGCATATGAATGCTGTA
GACCACTGGGCGCCGACTTTCGACTGTGAAACTTGCAACAGCACCTTCCGCACTCAACACGCCGCTAACAACCAT
ATGAACGCGAAGAGTCATTGGCTCCCGAAAGTTCCATGTGAGGCATGCCCGATGAAATTCTACACGCAGCAGGCC
GTGGAGAATCATATGAGCGCCAAAGGACATTACAAGAACTACTGCCAAGAATGCAGCCGTCAATTTATGAACGCG
AACTGTTTGCGCCAGCACCTGAATTCCAAGATCCATCGCGGCACCAACATTGCGTGTCCATTCTGTCGGGTTGGC
TTCGTCACTGCCAGCGGTGTCTCCCATCATCTTGAGTCTGGTGCCTGCCCTCAAGCTCAAGGCTTGAACCGCGAC
CGCATCCACCGCATTATTCAACAGCTTGATCCGAATGGTATTGTCTGCAAGAAGCAGATCGCGTGGCACGGTGAA
CATGAACAGGACATGACATACCTGGTCACCGACAATGCCTGGAATGGTAGCTGCTGGGTGTGTTACCTATGCAAA
AAGGGGTTCAACTCGCCAAAAGCGCTGGGGTCGCATGTCAACTCACCCGTCCACAATGAGAAGGTCTACCACTGC
CTCAAGCGAGGCTGTCCGAAGGAGTTCCACTCCCTGGCTAGTCTGTTCAACCACTTGGAAAGTGAATCGTGTGGA
TTCATTCGGTTCGAGGGGGTTCAACAGGTTCACAGACAGCTGAACGATGCCATCATGGGCCGCCGGACGATTACT
GGATTCTAG
Transcript >Pro_DTO377G3_2|g4777.t1
ATGTTCGAATGCATCACCTGCGATGCAGTATTCTGGGATCAGGATGACTGTGATGAGCATATGGATGACGAACGT
CACTGGATCGAATGTGAAACATGCAATCGATCGTTCCGCACCCAGAACGCTTGCAATCAGCATATGAATGCTGTA
GACCACTGGGCGCCGACTTTCGACTGTGAAACTTGCAACAGCACCTTCCGCACTCAACACGCCGCTAACAACCAT
ATGAACGCGAAGAGTCATTGGCTCCCGAAAGTTCCATGTGAGGCATGCCCGATGAAATTCTACACGCAGCAGGCC
GTGGAGAATCATATGAGCGCCAAAGGACATTACAAGAACTACTGCCAAGAATGCAGCCGTCAATTTATGAACGCG
AACTGTTTGCGCCAGCACCTGAATTCCAAGATCCATCGCGGCACCAACATTGCGTGTCCATTCTGTCGGGTTGGC
TTCGTCACTGCCAGCGGTGTCTCCCATCATCTTGAGTCTGGTGCCTGCCCTCAAGCTCAAGGCTTGAACCGCGAC
CGCATCCACCGCATTATTCAACAGCTTGATCCGAATGGTATTGTCTGCAAGAAGCAGATCGCGTGGCACGGTGAA
CATGAACAGGACATGACATACCTGGTCACCGACAATGCCTGGAATGGTAGCTGCTGGGTGTGTTACCTATGCAAA
AAGGGGTTCAACTCGCCAAAAGCGCTGGGGTCGCATGTCAACTCACCCGTCCACAATGAGAAGGTCTACCACTGC
CTCAAGCGAGGCTGTCCGAAGGAGTTCCACTCCCTGGCTAGTCTGTTCAACCACTTGGAAAGTGAATCGTGTGGA
TTCATTCGGTTCGAGGGGGTTCAACAGGTTCACAGACAGCTGAACGATGCCATCATGGGCCGCCGGACGATTACT
GGATTCTAG
Gene >Pro_DTO377G3_2|g4777.t1
ATGTTCGAATGCATCACCTGCGATGCAGTATTCTGGGATCAGGATGACTGTGATGAGCATATGGATGACGAACGT
CACTGGATCGAATGTGAAACATGCAATCGATCGTTCCGCACCCAGAACGCTTGCAATCAGCATATGAATGCTGTA
GACCACTGGGCGCCGACTTTCGACTGTGAAACTTGCAACAGCACCTTCCGCACTCAACACGCCGCTAACAACCAT
ATGAACGCGAAGAGTCATTGGCTCCCGAAAGTTCCATGTGAGGCATGCCCGATGAAATTCTACACGCAGCAGGCC
GTGGAGAATCATATGAGCGCCAAAGGACATTACAAGAACTACTGCCAAGAATGCAGCCGTCAATTTATGAACGCG
AACTGTTTGCGCCAGGTAGGCGAGCTGATATGATCCGAGAGAAACTTTGAACCCGTTCCACTCACGTCTTTATCT
CATAGCACCTGAATTCCAAGATCCATCGCGGCACCAACATTGCGTGTCCATTCTGTCGGGTTGGCTTCGTCACTG
CCAGCGGTGTCTCCCATCATCTTGAGTCTGGTGCCTGCCCTCAAGCTCAAGGCTTGAACCGCGACCGCATCCACC
GCATTATTCAACAGCTTGATCCGAATGGTATTGTCTGCAAGAAGCAGATCGCGTGGCACGGTGAACATGAACAGG
ACATGACATACCTGGTCACCGACAATGCCTGGAATGGTAGCTGCTGGGTGTGTTACCTATGCAAAAAGGGGTTCA
ACTCGCCAAAAGCGCTGGGGTCGCATGTCAACTCACCCGTCCACAATGAGAAGGTCTACCACTGCCTCAAGCGAG
GCTGTCCGAAGGAGTTCCACTCCCTGGCTAGTCTGTTCAACCACTTGGAAAGTGAATCGTGTGGATTCATTCGGT
TCGAGGGGGTTCAACAGGTTCACAGACAGCTGAACGATGCCATCATGGGCCGCCGGACGATTACTGGATTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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