Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4774.t1
Gene name
Locationscaffold_10:368669..369326
Strand+
Gene length (bp)657
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13857 Ank_5 Ankyrin repeats (many copies) 7.3E-08 29 70
PF13637 Ank_4 Ankyrin repeats (many copies) 3.8E-06 35 74
PF12796 Ank_2 Ankyrin repeats (3 copies) 2.2E-07 10 96
PF13606 Ank_3 Ankyrin repeat 1.1E-04 34 62
PF00023 Ank Ankyrin repeat 5.0E-03 34 65

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4774.t1
MAQNPYLLACDNPKVLLDLLRSNPSIASSQDESGYSLLHAAASYGHTDLLRALVKEFNVNVNLLDEDGETCLFVV
ENSDIARCLIEELGVDANKKNAEDLTAVEKFETENEFPQVAAYLREVVGGAPAPTHAQAAEVLNSPGPIPGSNMK
VNIGTMTEEEANAGGEPDPEFKRRIEELAAREDYYSEEVQNEVRELVKDAMAGSNIEAMEREIRRRTE*
Coding >Pro_DTO377G3_2|g4774.t1
ATGGCTCAAAATCCTTACCTATTGGCCTGCGACAACCCAAAGGTTCTTCTGGACCTGCTGCGGTCCAATCCTTCG
ATCGCATCGAGCCAGGATGAGTCCGGCTACTCATTGCTGCACGCCGCAGCCTCCTACGGCCATACCGATCTCCTA
CGCGCTCTAGTGAAAGAATTCAATGTCAACGTCAACCTGCTCGACGAAGATGGCGAGACATGTCTATTTGTGGTC
GAGAACAGTGACATTGCGCGCTGCTTAATCGAGGAGCTGGGTGTGGACGCCAATAAGAAGAACGCCGAGGACTTG
ACAGCCGTGGAAAAGTTTGAGACAGAAAATGAGTTCCCGCAGGTCGCTGCCTACCTCCGCGAAGTCGTCGGTGGT
GCTCCCGCTCCAACACACGCCCAGGCCGCAGAAGTTTTGAATTCGCCCGGACCCATCCCTGGCAGCAATATGAAG
GTGAACATTGGTACAATGACGGAAGAAGAGGCAAATGCTGGTGGTGAGCCTGATCCAGAATTCAAGAGGCGCATT
GAGGAGCTTGCTGCTCGTGAGGATTATTACAGCGAGGAGGTGCAAAATGAGGTGCGCGAGTTGGTCAAGGATGCC
ATGGCCGGCTCCAATATTGAAGCTATGGAACGGGAAATTCGGAGGAGAACCGAGTAA
Transcript >Pro_DTO377G3_2|g4774.t1
ATGGCTCAAAATCCTTACCTATTGGCCTGCGACAACCCAAAGGTTCTTCTGGACCTGCTGCGGTCCAATCCTTCG
ATCGCATCGAGCCAGGATGAGTCCGGCTACTCATTGCTGCACGCCGCAGCCTCCTACGGCCATACCGATCTCCTA
CGCGCTCTAGTGAAAGAATTCAATGTCAACGTCAACCTGCTCGACGAAGATGGCGAGACATGTCTATTTGTGGTC
GAGAACAGTGACATTGCGCGCTGCTTAATCGAGGAGCTGGGTGTGGACGCCAATAAGAAGAACGCCGAGGACTTG
ACAGCCGTGGAAAAGTTTGAGACAGAAAATGAGTTCCCGCAGGTCGCTGCCTACCTCCGCGAAGTCGTCGGTGGT
GCTCCCGCTCCAACACACGCCCAGGCCGCAGAAGTTTTGAATTCGCCCGGACCCATCCCTGGCAGCAATATGAAG
GTGAACATTGGTACAATGACGGAAGAAGAGGCAAATGCTGGTGGTGAGCCTGATCCAGAATTCAAGAGGCGCATT
GAGGAGCTTGCTGCTCGTGAGGATTATTACAGCGAGGAGGTGCAAAATGAGGTGCGCGAGTTGGTCAAGGATGCC
ATGGCCGGCTCCAATATTGAAGCTATGGAACGGGAAATTCGGAGGAGAACCGAGTAA
Gene >Pro_DTO377G3_2|g4774.t1
ATGGCTCAAAATCCTTACCTATTGGCCTGCGACAACCCAAAGGTTCTTCTGGACCTGCTGCGGTCCAATCCTTCG
ATCGCATCGAGCCAGGATGAGTCCGGCTACTCATTGCTGCACGCCGCAGCCTCCTACGGCCATACCGATCTCCTA
CGCGCTCTAGTGAAAGAATTCAATGTCAACGTCAACCTGCTCGACGAAGATGGCGAGACATGTCTATTTGTGGTC
GAGAACAGTGACATTGCGCGCTGCTTAATCGAGGAGCTGGGTGTGGACGCCAATAAGAAGAACGCCGAGGACTTG
ACAGCCGTGGAAAAGTTTGAGACAGAAAATGAGTTCCCGCAGGTCGCTGCCTACCTCCGCGAAGTCGTCGGTGGT
GCTCCCGCTCCAACACACGCCCAGGCCGCAGAAGTTTTGAATTCGCCCGGACCCATCCCTGGCAGCAATATGAAG
GTGAACATTGGTACAATGACGGAAGAAGAGGCAAATGCTGGTGGTGAGCCTGATCCAGAATTCAAGAGGCGCATT
GAGGAGCTTGCTGCTCGTGAGGATTATTACAGCGAGGAGGTGCAAAATGAGGTGCGCGAGTTGGTCAAGGATGCC
ATGGCCGGCTCCAATATTGAAGCTATGGAACGGGAAATTCGGAGGAGAACCGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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