Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g4770.t1
Gene name
Locationscaffold_10:357083..358574
Strand-
Gene length (bp)1491
Transcript length (bp)1491
Coding sequence length (bp)1491
Protein length (aa) 497

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 3.1E-11 265 362

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005488 binding No
GO:0005515 protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g4770.t1
MSHSGYSMGNQFPNDAIDPSDLNMQQQNGFMPYSYGSQQNMSSSFNFGNSGIDTDELLDLEISGQNGHQRDNVNY
LQDQSAGGIAMSHQSQMSHMYSNTPDNAPMASPFVQNSFNYEQYRMNQQNPHIHASSFDQNYLGTKRQSLQGMDR
TSSDGRSPMTPKTPALGSLTLGTPESGSFPSQPIRTGLQARHQKTLSNQWDGTPGSAQSYVESSPISSPPHQSHH
TGISEILKSGKHASLPAKVDAHLPGGGGDLESQEAKRRRRRASHNLVERRRRDNINERIQDLSHLVPQHRLEDDK
VRKQLVNNTALSMAGAGGSAATSLLAGGNGRRATAGNITMGLPIEEKEKGPNKGDILNGAVSWTRDLMWALHVKY
QQEAELAELIGSLGGTWPFEQTEEEKRMRSEILDALERNDPTSFSYTRGPGSGLRVPKHTNIAGDAVQGGDMSGL
TPPSLSPSFHSGTSSANGAGQPQYWNSAGHAAMSFKEEDEYGMEMG*
Coding >Pro_DTO377G3_2|g4770.t1
ATGTCACACTCCGGTTACTCGATGGGTAACCAATTCCCCAACGATGCGATCGATCCGTCCGACTTGAACATGCAG
CAGCAGAATGGCTTCATGCCCTACTCCTACGGCTCGCAACAGAACATGTCATCCAGCTTTAACTTCGGAAACTCC
GGCATCGATACAGACGAGTTGTTGGATCTCGAGATCAGCGGTCAAAACGGTCATCAGCGCGACAATGTGAATTAT
CTTCAAGACCAGTCTGCTGGTGGTATCGCGATGAGTCACCAAAGTCAGATGTCGCATATGTACTCCAACACCCCA
GATAATGCTCCCATGGCCAGCCCGTTCGTCCAAAACAGCTTCAACTATGAGCAGTATCGCATGAACCAGCAAAAT
CCCCACATCCATGCCAGCTCTTTCGACCAGAACTACCTCGGCACCAAGCGCCAGAGCTTGCAAGGCATGGACCGT
ACCTCATCTGACGGCCGCAGCCCCATGACCCCAAAGACACCCGCACTGGGTTCCTTGACATTGGGTACCCCTGAG
TCTGGCAGCTTCCCGTCCCAGCCTATCCGGACCGGCCTGCAGGCTCGTCACCAGAAAACCCTATCCAACCAGTGG
GATGGAACTCCCGGCAGCGCACAGTCTTACGTCGAATCCTCTCCTATCTCATCTCCTCCCCACCAATCGCACCAC
ACCGGCATTTCCGAGATCCTCAAGTCTGGGAAGCACGCCTCACTGCCCGCCAAGGTTGACGCGCATCTCCCTGGT
GGCGGGGGAGATCTCGAATCACAAGAAGCCAAGCGCCGACGTCGCCGCGCCTCGCATAACCTGGTAGAACGCCGC
CGACGTGACAATATCAACGAACGCATTCAGGATCTCTCCCACCTGGTTCCTCAGCACAGACTAGAAGACGACAAG
GTCCGGAAGCAACTTGTGAACAACACCGCTCTTTCCATGGCCGGTGCAGGTGGAAGTGCCGCCACGTCTCTCCTC
GCTGGAGGCAACGGTCGCCGTGCGACGGCGGGTAACATCACAATGGGTCTCCCAATCGAAGAAAAGGAGAAAGGT
CCTAACAAGGGTGACATACTCAACGGTGCCGTCAGCTGGACTCGCGATCTGATGTGGGCCCTACATGTCAAATAC
CAGCAAGAAGCGGAACTCGCCGAGCTGATCGGCAGCCTGGGTGGAACTTGGCCCTTCGAGCAAACCGAAGAGGAG
AAGCGCATGCGCAGCGAGATCCTCGATGCACTGGAGAGGAATGACCCAACTTCCTTCAGCTACACTCGCGGACCG
GGTAGCGGTTTACGCGTACCCAAGCACACTAACATTGCCGGCGATGCCGTGCAGGGCGGCGACATGTCCGGCCTG
ACACCTCCGAGCCTGAGTCCTTCGTTCCACAGCGGTACTAGCAGTGCCAACGGCGCTGGTCAGCCGCAGTACTGG
AACAGTGCTGGCCATGCTGCTATGAGCTTCAAGGAGGAGGACGAGTACGGCATGGAGATGGGCTAG
Transcript >Pro_DTO377G3_2|g4770.t1
ATGTCACACTCCGGTTACTCGATGGGTAACCAATTCCCCAACGATGCGATCGATCCGTCCGACTTGAACATGCAG
CAGCAGAATGGCTTCATGCCCTACTCCTACGGCTCGCAACAGAACATGTCATCCAGCTTTAACTTCGGAAACTCC
GGCATCGATACAGACGAGTTGTTGGATCTCGAGATCAGCGGTCAAAACGGTCATCAGCGCGACAATGTGAATTAT
CTTCAAGACCAGTCTGCTGGTGGTATCGCGATGAGTCACCAAAGTCAGATGTCGCATATGTACTCCAACACCCCA
GATAATGCTCCCATGGCCAGCCCGTTCGTCCAAAACAGCTTCAACTATGAGCAGTATCGCATGAACCAGCAAAAT
CCCCACATCCATGCCAGCTCTTTCGACCAGAACTACCTCGGCACCAAGCGCCAGAGCTTGCAAGGCATGGACCGT
ACCTCATCTGACGGCCGCAGCCCCATGACCCCAAAGACACCCGCACTGGGTTCCTTGACATTGGGTACCCCTGAG
TCTGGCAGCTTCCCGTCCCAGCCTATCCGGACCGGCCTGCAGGCTCGTCACCAGAAAACCCTATCCAACCAGTGG
GATGGAACTCCCGGCAGCGCACAGTCTTACGTCGAATCCTCTCCTATCTCATCTCCTCCCCACCAATCGCACCAC
ACCGGCATTTCCGAGATCCTCAAGTCTGGGAAGCACGCCTCACTGCCCGCCAAGGTTGACGCGCATCTCCCTGGT
GGCGGGGGAGATCTCGAATCACAAGAAGCCAAGCGCCGACGTCGCCGCGCCTCGCATAACCTGGTAGAACGCCGC
CGACGTGACAATATCAACGAACGCATTCAGGATCTCTCCCACCTGGTTCCTCAGCACAGACTAGAAGACGACAAG
GTCCGGAAGCAACTTGTGAACAACACCGCTCTTTCCATGGCCGGTGCAGGTGGAAGTGCCGCCACGTCTCTCCTC
GCTGGAGGCAACGGTCGCCGTGCGACGGCGGGTAACATCACAATGGGTCTCCCAATCGAAGAAAAGGAGAAAGGT
CCTAACAAGGGTGACATACTCAACGGTGCCGTCAGCTGGACTCGCGATCTGATGTGGGCCCTACATGTCAAATAC
CAGCAAGAAGCGGAACTCGCCGAGCTGATCGGCAGCCTGGGTGGAACTTGGCCCTTCGAGCAAACCGAAGAGGAG
AAGCGCATGCGCAGCGAGATCCTCGATGCACTGGAGAGGAATGACCCAACTTCCTTCAGCTACACTCGCGGACCG
GGTAGCGGTTTACGCGTACCCAAGCACACTAACATTGCCGGCGATGCCGTGCAGGGCGGCGACATGTCCGGCCTG
ACACCTCCGAGCCTGAGTCCTTCGTTCCACAGCGGTACTAGCAGTGCCAACGGCGCTGGTCAGCCGCAGTACTGG
AACAGTGCTGGCCATGCTGCTATGAGCTTCAAGGAGGAGGACGAGTACGGCATGGAGATGGGCTAG
Gene >Pro_DTO377G3_2|g4770.t1
ATGTCACACTCCGGTTACTCGATGGGTAACCAATTCCCCAACGATGCGATCGATCCGTCCGACTTGAACATGCAG
CAGCAGAATGGCTTCATGCCCTACTCCTACGGCTCGCAACAGAACATGTCATCCAGCTTTAACTTCGGAAACTCC
GGCATCGATACAGACGAGTTGTTGGATCTCGAGATCAGCGGTCAAAACGGTCATCAGCGCGACAATGTGAATTAT
CTTCAAGACCAGTCTGCTGGTGGTATCGCGATGAGTCACCAAAGTCAGATGTCGCATATGTACTCCAACACCCCA
GATAATGCTCCCATGGCCAGCCCGTTCGTCCAAAACAGCTTCAACTATGAGCAGTATCGCATGAACCAGCAAAAT
CCCCACATCCATGCCAGCTCTTTCGACCAGAACTACCTCGGCACCAAGCGCCAGAGCTTGCAAGGCATGGACCGT
ACCTCATCTGACGGCCGCAGCCCCATGACCCCAAAGACACCCGCACTGGGTTCCTTGACATTGGGTACCCCTGAG
TCTGGCAGCTTCCCGTCCCAGCCTATCCGGACCGGCCTGCAGGCTCGTCACCAGAAAACCCTATCCAACCAGTGG
GATGGAACTCCCGGCAGCGCACAGTCTTACGTCGAATCCTCTCCTATCTCATCTCCTCCCCACCAATCGCACCAC
ACCGGCATTTCCGAGATCCTCAAGTCTGGGAAGCACGCCTCACTGCCCGCCAAGGTTGACGCGCATCTCCCTGGT
GGCGGGGGAGATCTCGAATCACAAGAAGCCAAGCGCCGACGTCGCCGCGCCTCGCATAACCTGGTAGAACGCCGC
CGACGTGACAATATCAACGAACGCATTCAGGATCTCTCCCACCTGGTTCCTCAGCACAGACTAGAAGACGACAAG
GTCCGGAAGCAACTTGTGAACAACACCGCTCTTTCCATGGCCGGTGCAGGTGGAAGTGCCGCCACGTCTCTCCTC
GCTGGAGGCAACGGTCGCCGTGCGACGGCGGGTAACATCACAATGGGTCTCCCAATCGAAGAAAAGGAGAAAGGT
CCTAACAAGGGTGACATACTCAACGGTGCCGTCAGCTGGACTCGCGATCTGATGTGGGCCCTACATGTCAAATAC
CAGCAAGAAGCGGAACTCGCCGAGCTGATCGGCAGCCTGGGTGGAACTTGGCCCTTCGAGCAAACCGAAGAGGAG
AAGCGCATGCGCAGCGAGATCCTCGATGCACTGGAGAGGAATGACCCAACTTCCTTCAGCTACACTCGCGGACCG
GGTAGCGGTTTACGCGTACCCAAGCACACTAACATTGCCGGCGATGCCGTGCAGGGCGGCGACATGTCCGGCCTG
ACACCTCCGAGCCTGAGTCCTTCGTTCCACAGCGGTACTAGCAGTGCCAACGGCGCTGGTCAGCCGCAGTACTGG
AACAGTGCTGGCCATGCTGCTATGAGCTTCAAGGAGGAGGACGAGTACGGCATGGAGATGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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