© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g4756.t1 |
| Gene name | |
| Location | scaffold_10:317354..318955 |
| Strand | + |
| Gene length (bp) | 1601 |
| Transcript length (bp) | 1470 |
| Coding sequence length (bp) | 1470 |
| Protein length (aa) | 490 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-29 | 38 | 428 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 2.7E-08 | 76 | 236 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 100 | 119 | 19 |
| 3 | 126 | 148 | 22 |
| 4 | 163 | 185 | 22 |
| 5 | 192 | 214 | 22 |
| 6 | 270 | 292 | 22 |
| 7 | 301 | 323 | 22 |
| 8 | 349 | 371 | 22 |
| 9 | 378 | 400 | 22 |
| 10 | 443 | 465 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 2.77 | 0.67 | 4.86 |
| 5d_25C | Five days - 25 degrees Celsius | 0.93 | 0.00 | 1.87 |
| 7d_25C | Seven days - 25 degrees Celsius | 1.14 | 0.05 | 2.22 |
| 10d_25C | Ten days - 25 degrees Celsius | 0.66 | 0.00 | 1.41 |
| 7d_15C | Seven days - 15 degrees Celsius | 33.09 | 18.18 | 48.00 |
| 7d_30C | Seven days - 30 degrees Celsius | 0.46 | 0.00 | 1.02 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.025858 | yes |
| 3d_25C | 7d_25C | 0.074116 | no |
| 3d_25C | 7d_15C | 0.000700 | yes |
| 3d_25C | 7d_30C | 0.004840 | yes |
| 3d_25C | 10d_25C | 0.011993 | yes |
| 5d_25C | 7d_25C | 0.795906 | no |
| 5d_25C | 7d_15C | 0.000700 | yes |
| 5d_25C | 7d_30C | 0.278993 | no |
| 5d_25C | 10d_25C | 0.641991 | no |
| 7d_25C | 7d_15C | 0.000700 | yes |
| 7d_25C | 7d_30C | 0.157617 | no |
| 7d_25C | 10d_25C | 0.418753 | no |
| 7d_15C | 7d_30C | 0.000700 | yes |
| 7d_15C | 10d_25C | 0.000700 | yes |
| 7d_30C | 10d_25C | 1.000000 | no |
| Orthofinder run ID | 2 |
| Orthogroup | 7655 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g4756.t1 MSDKDKDIKIHTWDGPDDPENPFNWSFRYKWVITITVCFISILTGIPAGSYGSGNDWLKQEFNVQNTPFPNLYWA TTSWNMGAAFWPLIFVPLTESSGRMPGYFVAYILLVISLFPSAFAKNFATLIVTRFFGGGASSTAINIVGGSISD VWFGNEARSLPMSIFGFTSVVGISLGPFIGSSIVQIHRSHPWRWIFYIQIIYNAALIPVFWLILKETRPEVILKK RAKKIRKETNLPIYASSELDAPSKLNLLRLSFQRPTHMLIAEPVVTFFTLWISFAWGILFLFFSSVVQTYSTNYN WGTMSTGLIQLAISVGAVIGTVINPLQDWIHLRSERHNKENPGKPIPEARLYTSIPGSLLFAAGLFWYGWASQPH VHWIVPTIGVTATGIGIYSIYMAVVNYLTDAYERYAASALSAASLGRNTFGAFLPLASPQLFSNLGYGWAGTLLG FIGIALSVVPVVLVWKGPEIRRRSKFMREAMWEPSQRPG* |
| Coding | >Pro_DTO377G3_2|g4756.t1 ATGTCTGATAAGGATAAAGATATCAAAATCCACACATGGGATGGGCCCGATGACCCCGAGAATCCCTTCAATTGG AGCTTCAGATACAAATGGGTGATAACGATTACCGTTTGCTTCATCTCCATCCTGACAGGAATCCCCGCAGGAAGC TACGGCTCCGGCAACGACTGGTTGAAGCAAGAATTCAATGTCCAAAACACCCCCTTCCCAAACCTCTACTGGGCC ACCACTTCCTGGAACATGGGCGCCGCCTTCTGGCCACTGATTTTCGTCCCTCTGACAGAGTCCTCCGGCCGCATG CCAGGATACTTCGTGGCGTATATACTCCTCGTCATTTCGCTCTTCCCATCCGCGTTCGCAAAGAACTTCGCGACA CTCATCGTGACTCGGTTCTTCGGTGGAGGTGCTTCTTCCACCGCGATTAATATTGTCGGGGGAAGTATCTCCGAT GTGTGGTTCGGTAACGAGGCTCGCAGTCTGCCCATGTCTATATTCGGATTTACGAGTGTTGTCGGTATTTCACTT GGTCCATTTATTGGATCTTCTATTGTGCAGATTCATAGATCACACCCATGGCGTTGGATCTTCTACATCCAAATT ATCTACAACGCAGCCTTGATCCCGGTCTTTTGGCTAATACTCAAAGAAACCCGCCCAGAAGTGATCCTTAAGAAG CGCGCAAAGAAGATCCGCAAAGAAACAAACCTCCCCATCTACGCCTCTTCCGAACTAGATGCCCCAAGCAAACTC AATCTCTTGAGACTCTCCTTCCAACGCCCAACACACATGCTCATAGCCGAGCCGGTCGTGACCTTCTTCACTTTA TGGATAAGTTTCGCCTGGGGGATCCTGTTCCTCTTCTTTTCCAGCGTCGTGCAAACCTACTCCACAAACTACAAC TGGGGTACGATGTCAACAGGCCTGATACAGCTCGCCATCTCGGTGGGTGCGGTCATCGGGACAGTCATCAACCCG CTGCAGGACTGGATTCATCTCCGCTCTGAGCGGCATAATAAAGAGAACCCGGGGAAACCTATCCCTGAGGCGAGA CTGTACACATCTATCCCGGGTAGTCTGCTATTTGCGGCGGGTTTGTTCTGGTACGGCTGGGCTAGTCAGCCGCAT GTTCATTGGATCGTGCCGACTATCGGTGTTACGGCGACAGGGATTGGGATCTATTCGATTTATATGGCTGTTGTT AATTATTTGACTGATGCTTATGAGCGTTATGCGGCATCGGCTTTGTCGGCTGCTTCGCTTGGGAGGAATACTTTT GGTGCGTTCTTGCCGCTTGCTTCGCCGCAGTTGTTCTCCAATCTCGGGTATGGATGGGCGGGGACTTTGCTTGGG TTTATTGGGATTGCGTTGTCTGTCGTGCCTGTTGTTTTGGTTTGGAAAGGCCCGGAGATTCGGAGGAGGAGCAAG TTTATGAGGGAGGCGATGTGGGAGCCTTCGCAGAGGCCGGGCTAG |
| Transcript | >Pro_DTO377G3_2|g4756.t1 ATGTCTGATAAGGATAAAGATATCAAAATCCACACATGGGATGGGCCCGATGACCCCGAGAATCCCTTCAATTGG AGCTTCAGATACAAATGGGTGATAACGATTACCGTTTGCTTCATCTCCATCCTGACAGGAATCCCCGCAGGAAGC TACGGCTCCGGCAACGACTGGTTGAAGCAAGAATTCAATGTCCAAAACACCCCCTTCCCAAACCTCTACTGGGCC ACCACTTCCTGGAACATGGGCGCCGCCTTCTGGCCACTGATTTTCGTCCCTCTGACAGAGTCCTCCGGCCGCATG CCAGGATACTTCGTGGCGTATATACTCCTCGTCATTTCGCTCTTCCCATCCGCGTTCGCAAAGAACTTCGCGACA CTCATCGTGACTCGGTTCTTCGGTGGAGGTGCTTCTTCCACCGCGATTAATATTGTCGGGGGAAGTATCTCCGAT GTGTGGTTCGGTAACGAGGCTCGCAGTCTGCCCATGTCTATATTCGGATTTACGAGTGTTGTCGGTATTTCACTT GGTCCATTTATTGGATCTTCTATTGTGCAGATTCATAGATCACACCCATGGCGTTGGATCTTCTACATCCAAATT ATCTACAACGCAGCCTTGATCCCGGTCTTTTGGCTAATACTCAAAGAAACCCGCCCAGAAGTGATCCTTAAGAAG CGCGCAAAGAAGATCCGCAAAGAAACAAACCTCCCCATCTACGCCTCTTCCGAACTAGATGCCCCAAGCAAACTC AATCTCTTGAGACTCTCCTTCCAACGCCCAACACACATGCTCATAGCCGAGCCGGTCGTGACCTTCTTCACTTTA TGGATAAGTTTCGCCTGGGGGATCCTGTTCCTCTTCTTTTCCAGCGTCGTGCAAACCTACTCCACAAACTACAAC TGGGGTACGATGTCAACAGGCCTGATACAGCTCGCCATCTCGGTGGGTGCGGTCATCGGGACAGTCATCAACCCG CTGCAGGACTGGATTCATCTCCGCTCTGAGCGGCATAATAAAGAGAACCCGGGGAAACCTATCCCTGAGGCGAGA CTGTACACATCTATCCCGGGTAGTCTGCTATTTGCGGCGGGTTTGTTCTGGTACGGCTGGGCTAGTCAGCCGCAT GTTCATTGGATCGTGCCGACTATCGGTGTTACGGCGACAGGGATTGGGATCTATTCGATTTATATGGCTGTTGTT AATTATTTGACTGATGCTTATGAGCGTTATGCGGCATCGGCTTTGTCGGCTGCTTCGCTTGGGAGGAATACTTTT GGTGCGTTCTTGCCGCTTGCTTCGCCGCAGTTGTTCTCCAATCTCGGGTATGGATGGGCGGGGACTTTGCTTGGG TTTATTGGGATTGCGTTGTCTGTCGTGCCTGTTGTTTTGGTTTGGAAAGGCCCGGAGATTCGGAGGAGGAGCAAG TTTATGAGGGAGGCGATGTGGGAGCCTTCGCAGAGGCCGGGCTAG |
| Gene | >Pro_DTO377G3_2|g4756.t1 ATGTCTGATAAGGATAAAGATATCAAAATCCACACATGGGATGGGCCCGATGACCCCGAGAATCCCTTCAATTGG AGCTTCAGATACAAATGGGTGATAACGATTACCGTTTGCTTCATGTAAGAAATGCCATCTCAACACAAAATACAT AATTTTAAGCATCAAAATAACATCCTCACCAGCTCCATCCTGACAGGAATCCCCGCAGGAAGCTACGGCTCCGGC AACGACTGGTTGAAGCAAGAATTCAATGTCCAAAACACCCCCTTCCCAAACCTCTACTGGGCCACCACTTCCTGG AACATGGGCGCCGCCTTCTGGCCACTGATTTTCGTCCCTCTGACAGAGTCCTCCGGCCGCATGCCAGGATACTTC GTGGCGTATATACTCCTCGTCATTTCGCTCTTCCCATCCGCGTTCGCAAAGAACTTCGCGACACTCATCGTGACT CGGTTCTTCGGTGGAGGTGCTTCTTCCACCGCGATTAATATTGTCGGGGGAAGTATCTCCGATGTGTGGTTCGGT AACGAGGCTCGCAGTCTGCCCATGTCTATATTCGGATTTACGAGTGTTGTCGGTATTTCACTTGGTCCATTTATT GGATCTTCTATTGTGCAGATTCATAGATCACACCCATGGCGTTGGTAAGCACAACTTGCATTTCCGAATATCAAT TTCCAAAATCCCATCATGCTGACCACCTCCCACGTAGGATCTTCTACATCCAAATTATCTACAACGCAGCCTTGA TCCCGGTCTTTTGGCTAATACTCAAAGAAACCCGCCCAGAAGTGATCCTTAAGAAGCGCGCAAAGAAGATCCGCA AAGAAACAAACCTCCCCATCTACGCCTCTTCCGAACTAGATGCCCCAAGCAAACTCAATCTCTTGAGACTCTCCT TCCAACGCCCAACACACATGCTCATAGCCGAGCCGGTCGTGACCTTCTTCACTTTATGGATAAGTTTCGCCTGGG GGATCCTGTTCCTCTTCTTTTCCAGCGTCGTGCAAACCTACTCCACAAACTACAACTGGGGTACGATGTCAACAG GCCTGATACAGCTCGCCATCTCGGTGGGTGCGGTCATCGGGACAGTCATCAACCCGCTGCAGGACTGGATTCATC TCCGCTCTGAGCGGCATAATAAAGAGAACCCGGGGAAACCTATCCCTGAGGCGAGACTGTACACATCTATCCCGG GTAGTCTGCTATTTGCGGCGGGTTTGTTCTGGTACGGCTGGGCTAGTCAGCCGCATGTTCATTGGATCGTGCCGA CTATCGGTGTTACGGCGACAGGGATTGGGATCTATTCGATTTATATGGCTGTTGTTAATTATTTGACTGATGCTT ATGAGCGTTATGCGGCATCGGCTTTGTCGGCTGCTTCGCTTGGGAGGAATACTTTTGGTGCGTTCTTGCCGCTTG CTTCGCCGCAGTTGTTCTCCAATCTCGGGTATGGATGGGCGGGGACTTTGCTTGGGTTTATTGGGATTGCGTTGT CTGTCGTGCCTGTTGTTTTGGTTTGGAAAGGCCCGGAGATTCGGAGGAGGAGCAAGTTTATGAGGGAGGCGATGT GGGAGCCTTCGCAGAGGCCGGGCTAG |